RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR35, Length 204 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR35	snR35	COQ11	Q05892	277 aa		3.22	□□□□□ -1.89
snR35	snR35	GRC3	Q07845	632 aa		3.22	□□□□□ -1.89
snR35	snR35	CDC45	Q08032	650 aa		3.22	□□□□□ -1.89
snR35	snR35	YOL159C	Q08300	171 aa		3.22	□□□□□ -1.89
snR35	snR35	RLM1	Q12224	676 aa		3.22	□□□□□ -1.89
snR35	snR35	NDJ1	Q12366	352 aa		3.22	□□□□□ -1.89
snR35	snR35	SGS1	P35187	1447 aa		3.21	□□□□□ -1.9
snR35	snR35	PUT2	P07275	575 aa		3.21	□□□□□ -1.9
snR35	snR35	MRP13	P12686	339 aa		3.21	□□□□□ -1.9
snR35	snR35	CLC1	P17891	233 aa		3.21	□□□□□ -1.9
snR35	snR35	SUI2	P20459	304 aa	Known RBP	3.21	□□□□□ -1.9
snR35	snR35	NUP1	P20676	1076 aa		3.21	□□□□□ -1.9
snR35	snR35	GPI10	P30777	616 aa		3.21	□□□□□ -1.9
snR35	snR35	PXA2	P34230	853 aa		3.21	□□□□□ -1.9
snR35	snR35	DOT5	P40553	215 aa		3.21	□□□□□ -1.9
snR35	snR35	CFD1	P40558	293 aa		3.21	□□□□□ -1.9
snR35	snR35	MAF1	P41910	395 aa		3.21	□□□□□ -1.9
snR35	snR35	YML6	P51998	286 aa		3.21	□□□□□ -1.9
snR35	snR35	YGR250C	P53316	781 aa	Known RBP	3.21	□□□□□ -1.9
snR35	snR35	COP1	P53622	1201 aa	Known RBP	3.21	□□□□□ -1.9
snR35	snR35	ERG13	P54839	491 aa	Known RBP	3.21	□□□□□ -1.9
snR35	snR35	YDR239C	Q03780	787 aa		3.21	□□□□□ -1.9
snR35	snR35	CAC2	Q04199	468 aa		3.21	□□□□□ -1.9
snR35	snR35	ARP10	Q04549	284 aa		3.21	□□□□□ -1.9
snR35	snR35	ECM22	Q05958	814 aa	Predicted RBP	3.21	□□□□□ -1.9
snR35	snR35	ATG26	Q06321	1198 aa		3.21	□□□□□ -1.9
snR35	snR35	PFA4	Q12006	378 aa		3.21	□□□□□ -1.9
snR35	snR35	FRE7	Q12333	620 aa		3.21	□□□□□ -1.9
snR35	snR35	RRI1	Q12468	440 aa		3.21	□□□□□ -1.9
snR35	snR35	YNL162W-A	Q3E7A8	72 aa		3.21	□□□□□ -1.9
snR35	snR35	DBF4	P32325	704 aa		3.2	□□□□□ -1.9
snR35	snR35	VMA8	P32610	256 aa	Known RBP	3.2	□□□□□ -1.9
snR35	snR35	PEX5	P35056	612 aa		3.2	□□□□□ -1.9
snR35	snR35	CUE2	P36075	443 aa	Known RBP	3.2	□□□□□ -1.9
snR35	snR35	RPL32	P38061	130 aa	Known RBP	3.2	□□□□□ -1.9
snR35	snR35	RFC1	P38630	861 aa	Known RBP	3.2	□□□□□ -1.9
snR35	snR35	ARP1	P38696	384 aa		3.2	□□□□□ -1.9
snR35	snR35	UBA4	P38820	440 aa		3.2	□□□□□ -1.9
snR35	snR35	LTP1	P40347	161 aa		3.2	□□□□□ -1.9
snR35	snR35	ULP2	P40537	1034 aa	Predicted RBP	3.2	□□□□□ -1.9
snR35	snR35	HXT14	P42833	540 aa		3.2	□□□□□ -1.9
snR35	snR35	IPI3	P53877	555 aa		3.2	□□□□□ -1.9
snR35	snR35	ADE13	Q05911	482 aa	Known RBP	3.2	□□□□□ -1.9
snR35	snR35	MCP2	Q06567	569 aa		3.2	□□□□□ -1.9
snR35	snR35	ECM30	Q06673	1274 aa		3.2	□□□□□ -1.9
snR35	snR35	FRE3	Q08905	711 aa		3.2	□□□□□ -1.9
snR35	snR35	REC107	P21651	314 aa		3.19	□□□□□ -1.9
snR35	snR35	PAP1	P29468	568 aa	Known RBP	3.19	□□□□□ -1.9
snR35	snR35	MTR2	P34232	184 aa	Known RBP	3.19	□□□□□ -1.9
snR35	snR35	SRP72	P38688	640 aa	Known RBP	3.19	□□□□□ -1.9
snR35	snR35	MSR1	P38714	643 aa		3.19	□□□□□ -1.9
snR35	snR35	ANS1	P38832	159 aa		3.19	□□□□□ -1.9
snR35	snR35	PHO90	P39535	881 aa		3.19	□□□□□ -1.9
snR35	snR35	ATF1	P40353	525 aa		3.19	□□□□□ -1.9
snR35	snR35	ALK1	P43633	760 aa	Known RBP	3.19	□□□□□ -1.9
snR35	snR35	STB2	P46679	850 aa		3.19	□□□□□ -1.9
snR35	snR35	PYK2	P52489	506 aa	Known RBP	3.19	□□□□□ -1.9
snR35	snR35	YNL144C	P53907	740 aa		3.19	□□□□□ -1.9
snR35	snR35	RSM23	Q01163	450 aa		3.19	□□□□□ -1.9
snR35	snR35	MSC1	Q03104	513 aa		3.19	□□□□□ -1.9
snR35	snR35	YDR131C	Q03899	556 aa		3.19	□□□□□ -1.9
snR35	snR35	VTA1	Q06263	330 aa		3.19	□□□□□ -1.9
snR35	snR35	POS5	Q06892	414 aa		3.19	□□□□□ -1.9
snR35	snR35	RPS10A	Q08745	105 aa	Predicted RBP	3.19	□□□□□ -1.9
snR35	snR35	CRC1	Q12289	327 aa		3.19	□□□□□ -1.9
snR35	snR35	YDL007C-A	Q2V2Q0	85 aa		3.19	□□□□□ -1.9
snR35	snR35	YOL159C-A	Q3E769	90 aa		3.19	□□□□□ -1.9
snR35	snR35	GAL4	P04386	881 aa		3.18	□□□□□ -1.9
snR35	snR35	YMR085W	P0CF18	432 aa		3.18	□□□□□ -1.9
snR35	snR35	RPB8	P20436	146 aa		3.18	□□□□□ -1.9
snR35	snR35	ADK2	P26364	225 aa		3.18	□□□□□ -1.9
snR35	snR35	YME1	P32795	747 aa		3.18	□□□□□ -1.9
snR35	snR35	PMT1	P33775	817 aa		3.18	□□□□□ -1.9
snR35	snR35	STV1	P37296	890 aa		3.18	□□□□□ -1.9
snR35	snR35	YJL068C	P40363	299 aa		3.18	□□□□□ -1.9
snR35	snR35	PSA1	P41940	361 aa	Known RBP	3.18	□□□□□ -1.9
snR35	snR35	RPS10B	P46784	105 aa	Known RBP	3.18	□□□□□ -1.9
snR35	snR35	YGR126W	P53274	230 aa		3.18	□□□□□ -1.9
snR35	snR35	CTL1	Q03220	320 aa	Known RBP	3.18	□□□□□ -1.9
snR35	snR35	RMT2	Q03305	412 aa		3.18	□□□□□ -1.9
snR35	snR35	RIM13	Q03792	727 aa		3.18	□□□□□ -1.9
snR35	snR35	ECI1	Q05871	280 aa		3.18	□□□□□ -1.9
snR35	snR35	CBP1	P07252	654 aa		3.17	□□□□□ -1.9
snR35	snR35	SNF3	P10870	884 aa		3.17	□□□□□ -1.9
snR35	snR35	YAP1	P19880	650 aa	Known RBP	3.17	□□□□□ -1.9
snR35	snR35	PRP2	P20095	876 aa	Predicted RBP	3.17	□□□□□ -1.9
snR35	snR35	BUD14	P27637	709 aa		3.17	□□□□□ -1.9
snR35	snR35	SAS3	P34218	831 aa		3.17	□□□□□ -1.9
snR35	snR35	YKL023W	P36103	277 aa	Known RBP	3.17	□□□□□ -1.9
snR35	snR35	LEU5	P38702	357 aa		3.17	□□□□□ -1.9
snR35	snR35	LAG1	P38703	411 aa		3.17	□□□□□ -1.9
snR35	snR35	YHR210C	P38893	341 aa		3.17	□□□□□ -1.9
snR35	snR35	YIL024C	P40543	189 aa		3.17	□□□□□ -1.9
snR35	snR35	SSU1	P41930	458 aa		3.17	□□□□□ -1.9
snR35	snR35	DLD2	P46681	530 aa	Known RBP	3.17	□□□□□ -1.9
snR35	snR35	VPS25	P47142	202 aa		3.17	□□□□□ -1.9
snR35	snR35	SGF73	P53165	657 aa		3.17	□□□□□ -1.9
snR35	snR35	VPS9	P54787	451 aa		3.17	□□□□□ -1.9
snR35	snR35	RPA49	Q01080	415 aa	Predicted RBP	3.17	□□□□□ -1.9
snR35	snR35	TOF2	Q02208	771 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms