RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W DSS1P39112 969 aa5.04□□□□□ -1.6
SSO1YPL232W MBP1P39678 833 aa5.04□□□□□ -1.6
SSO1YPL232W SPC72P39723 622 aa5.04□□□□□ -1.6
SSO1YPL232W PFA3P42836 336 aa5.04□□□□□ -1.6
SSO1YPL232W YGR012WP53206 393 aa5.04□□□□□ -1.6
SSO1YPL232W SED5Q01590 340 aa5.04□□□□□ -1.6
SSO1YPL232W GIC2Q06648 383 aa5.04□□□□□ -1.6
SSO1YPL232W PUS7Q08647 676 aaKnown RBP5.04□□□□□ -1.6
SSO1YPL232W SLH1P53327 1967 aaKnown RBP5.04□□□□□ -1.6
SSO1YPL232W CDC39P25655 2108 aaKnown RBP5.03□□□□□ -1.6
SSO1YPL232W PBS2P08018 668 aa5.03□□□□□ -1.6
SSO1YPL232W RPS4AP0CX35 261 aaKnown RBP5.03□□□□□ -1.6
SSO1YPL232W RPS4BP0CX36 261 aaKnown RBP5.03□□□□□ -1.6
SSO1YPL232W PMS1P14242 873 aa5.03□□□□□ -1.6
SSO1YPL232W GBP2P25555 427 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
SSO1YPL232W UGP1P32861 499 aaKnown RBP5.03□□□□□ -1.6
SSO1YPL232W YSW1P38280 609 aa5.03□□□□□ -1.6
SSO1YPL232W IBA57P47158 497 aa5.03□□□□□ -1.6
SSO1YPL232W OCA1P50946 238 aaPredicted RBP5.03□□□□□ -1.6
SSO1YPL232W PAN2P53010 1115 aaPredicted RBP5.03□□□□□ -1.6
SSO1YPL232W COS12P53053 380 aa5.03□□□□□ -1.6
SSO1YPL232W LCL3P53153 274 aa5.03□□□□□ -1.6
SSO1YPL232W YDR018CQ12185 396 aa5.03□□□□□ -1.6
SSO1YPL232W LSP1Q12230 341 aaKnown RBP5.03□□□□□ -1.6
SSO1YPL232W YDL177CQ12257 170 aa5.03□□□□□ -1.6
SSO1YPL232W PRS5Q12265 496 aaKnown RBP5.03□□□□□ -1.6
SSO1YPL232W RMD5Q12508 421 aa5.03□□□□□ -1.6
SSO1YPL232W LAT1P12695 482 aaKnown RBP5.02□□□□□ -1.61
SSO1YPL232W AMD1P15274 810 aaKnown RBP5.02□□□□□ -1.61
SSO1YPL232W GAR1P28007 205 aaKnown RBP5.02□□□□□ -1.61
SSO1YPL232W NDI1P32340 513 aa5.02□□□□□ -1.61
SSO1YPL232W SRB5P32585 307 aa5.02□□□□□ -1.61
SSO1YPL232W TIP20P33891 701 aa5.02□□□□□ -1.61
SSO1YPL232W YBL055CP34220 418 aaPredicted RBP5.02□□□□□ -1.61
SSO1YPL232W MAK5P38112 773 aaPredicted RBP5.02□□□□□ -1.61
SSO1YPL232W YBP1P38315 674 aa5.02□□□□□ -1.61
SSO1YPL232W RRT2P38332 387 aa5.02□□□□□ -1.61
SSO1YPL232W YHR020WP38708 688 aaKnown RBP5.02□□□□□ -1.61
SSO1YPL232W HSE1P38753 452 aa5.02□□□□□ -1.61
SSO1YPL232W ACO2P39533 789 aa5.02□□□□□ -1.61
SSO1YPL232W NNF1P47149 201 aa5.02□□□□□ -1.61
SSO1YPL232W NOP15P53927 220 aaPredicted RBP5.02□□□□□ -1.61
SSO1YPL232W TRS31Q03337 283 aa5.02□□□□□ -1.61
SSO1YPL232W NUP53Q03790 475 aa5.02□□□□□ -1.61
SSO1YPL232W HED1Q03937 162 aa5.02□□□□□ -1.61
SSO1YPL232W BDS1Q08347 646 aa5.02□□□□□ -1.61
SSO1YPL232W FAP7Q12055 197 aaPredicted RBP5.02□□□□□ -1.61
SSO1YPL232W YLR049CQ12110 428 aa5.02□□□□□ -1.61
SSO1YPL232W ATG9Q12142 997 aa5.02□□□□□ -1.61
SSO1YPL232W YRA1Q12159 226 aaKnown RBP5.02□□□□□ -1.61
SSO1YPL232W TPO4Q12256 659 aa5.02□□□□□ -1.61
SSO1YPL232W NSI1Q12457 570 aa5.02□□□□□ -1.61
SSO1YPL232W KAR1P11927 433 aa5.01□□□□□ -1.61
SSO1YPL232W ATE1P16639 503 aa5.01□□□□□ -1.61
SSO1YPL232W SPO12P17123 173 aa5.01□□□□□ -1.61
SSO1YPL232W BUD14P27637 709 aa5.01□□□□□ -1.61
SSO1YPL232W FAA1P30624 700 aaKnown RBP5.01□□□□□ -1.61
SSO1YPL232W GUT2P32191 649 aa5.01□□□□□ -1.61
SSO1YPL232W ATP11P32453 318 aa5.01□□□□□ -1.61
SSO1YPL232W ATO2P32907 282 aa5.01□□□□□ -1.61
SSO1YPL232W SKT5P34226 696 aa5.01□□□□□ -1.61
SSO1YPL232W YPT52P36018 234 aaKnown RBP5.01□□□□□ -1.61
SSO1YPL232W SOL2P37262 315 aa5.01□□□□□ -1.61
SSO1YPL232W EHT1P38295 451 aa5.01□□□□□ -1.61
SSO1YPL232W DMA1P38823 416 aa5.01□□□□□ -1.61
SSO1YPL232W MNL1P38888 796 aa5.01□□□□□ -1.61
SSO1YPL232W CKB2P38930 258 aa5.01□□□□□ -1.61
SSO1YPL232W YMR124WP39523 943 aaKnown RBP5.01□□□□□ -1.61
SSO1YPL232W SEO1P39709 593 aa5.01□□□□□ -1.61
SSO1YPL232W RVS167P39743 482 aaKnown RBP5.01□□□□□ -1.61
SSO1YPL232W GID8P40208 455 aa5.01□□□□□ -1.61
SSO1YPL232W YIL152WP40455 235 aa5.01□□□□□ -1.61
SSO1YPL232W TAH11P47112 604 aa5.01□□□□□ -1.61
SSO1YPL232W GCV1P48015 400 aa5.01□□□□□ -1.61
SSO1YPL232W BRO1P48582 844 aa5.01□□□□□ -1.61
SSO1YPL232W ERG26P53199 349 aaKnown RBP5.01□□□□□ -1.61
SSO1YPL232W JJJ1P53863 590 aa5.01□□□□□ -1.61
SSO1YPL232W AAT1Q01802 451 aa5.01□□□□□ -1.61
SSO1YPL232W PET117Q02771 107 aa5.01□□□□□ -1.61
SSO1YPL232W RSC3Q06639 885 aa5.01□□□□□ -1.61
SSO1YPL232W YOR114WQ12219 294 aa5.01□□□□□ -1.61
SSO1YPL232W PHO5P00635 467 aa5□□□□□ -1.61
SSO1YPL232W ERR1P0CX10 437 aa5□□□□□ -1.61
SSO1YPL232W ERR2P0CX11 437 aa5□□□□□ -1.61
SSO1YPL232W CDC24P11433 854 aaPredicted RBP5□□□□□ -1.61
SSO1YPL232W PRP16P15938 1071 aaPredicted RBP5□□□□□ -1.61
SSO1YPL232W PHO13P19881 312 aa5□□□□□ -1.61
SSO1YPL232W PMT2P31382 759 aa5□□□□□ -1.61
SSO1YPL232W LRG1P35688 1017 aa5□□□□□ -1.61
SSO1YPL232W RTT107P38850 1070 aa5□□□□□ -1.61
SSO1YPL232W SET5P38890 526 aaKnown RBP5□□□□□ -1.61
SSO1YPL232W SAP1P39955 897 aaKnown RBP5□□□□□ -1.61
SSO1YPL232W UTP18P40362 594 aaPredicted RBP5□□□□□ -1.61
SSO1YPL232W DPH1P40487 425 aaKnown RBP5□□□□□ -1.61
SSO1YPL232W ERR3P42222 437 aa5□□□□□ -1.61
SSO1YPL232W YML6P51998 286 aa5□□□□□ -1.61
SSO1YPL232W YGR250CP53316 781 aaKnown RBP5□□□□□ -1.61
SSO1YPL232W OPY2Q06810 360 aa5□□□□□ -1.61
SSO1YPL232W LDB17Q12342 491 aa5□□□□□ -1.61
SSO1YPL232W PHO2P07269 559 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms