RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeast

Gene CTK3, Length 891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTK3	YML112W	TYR1	P20049	452 aa		2.73	□□□□□ -1.97
CTK3	YML112W	SEC62	P21825	274 aa		2.73	□□□□□ -1.97
CTK3	YML112W	RPS2	P25443	254 aa	Known RBP	2.73	□□□□□ -1.97
CTK3	YML112W	ATS1	P31386	333 aa		2.73	□□□□□ -1.97
CTK3	YML112W	PDB1	P32473	366 aa	Known RBP	2.73	□□□□□ -1.97
CTK3	YML112W	VPS17	P32913	551 aa		2.73	□□□□□ -1.97
CTK3	YML112W	LAG1	P38703	411 aa		2.73	□□□□□ -1.97
CTK3	YML112W	YER010C	P40011	234 aa		2.73	□□□□□ -1.97
CTK3	YML112W	RPS7B	P48164	190 aa	Known RBP	2.73	□□□□□ -1.97
CTK3	YML112W	DIA3	P52290	468 aa		2.73	□□□□□ -1.97
CTK3	YML112W	YGR021W	P53212	290 aa		2.73	□□□□□ -1.97
CTK3	YML112W	GTR1	Q00582	310 aa		2.73	□□□□□ -1.97
CTK3	YML112W	RSM23	Q01163	450 aa		2.73	□□□□□ -1.97
CTK3	YML112W	YMR160W	Q03823	816 aa		2.73	□□□□□ -1.97
CTK3	YML112W	SNO4	Q04902	237 aa		2.73	□□□□□ -1.97
CTK3	YML112W	ECM30	Q06673	1274 aa		2.73	□□□□□ -1.97
CTK3	YML112W	GRC3	Q07845	632 aa		2.73	□□□□□ -1.97
CTK3	YML112W	THI20	Q08224	551 aa		2.73	□□□□□ -1.97
CTK3	YML112W	HSP33	Q08914	237 aa	Known RBP	2.73	□□□□□ -1.97
CTK3	YML112W	HSP32	Q08992	237 aa		2.73	□□□□□ -1.97
CTK3	YML112W	LEU9	Q12166	604 aa	Known RBP	2.73	□□□□□ -1.97
CTK3	YML112W	CBS2	P14905	389 aa		2.72	□□□□□ -1.97
CTK3	YML112W	PWP1	P21304	576 aa	Known RBP	2.72	□□□□□ -1.97
CTK3	YML112W	AXL2	P38928	823 aa		2.72	□□□□□ -1.97
CTK3	YML112W	RPH1	P39956	796 aa		2.72	□□□□□ -1.97
CTK3	YML112W	IES5	P40060	125 aa		2.72	□□□□□ -1.97
CTK3	YML112W	KAP123	P40069	1113 aa	Known RBP	2.72	□□□□□ -1.97
CTK3	YML112W	FMP10	P40098	244 aa		2.72	□□□□□ -1.97
CTK3	YML112W	YFR016C	P43597	1233 aa	Known RBP	2.72	□□□□□ -1.97
CTK3	YML112W	RTT101	P47050	842 aa		2.72	□□□□□ -1.97
CTK3	YML112W	AAD10	P47182	288 aa		2.72	□□□□□ -1.97
CTK3	YML112W	YDL186W	P48568	277 aa		2.72	□□□□□ -1.97
CTK3	YML112W	TLG2	Q08144	397 aa		2.72	□□□□□ -1.97
CTK3	YML112W	MCK1	P21965	375 aa	Known RBP	2.71	□□□□□ -1.98
CTK3	YML112W	PRE8	P23639	250 aa		2.71	□□□□□ -1.98
CTK3	YML112W	VMA16	P23968	213 aa		2.71	□□□□□ -1.98
CTK3	YML112W	NDC1	P32500	655 aa		2.71	□□□□□ -1.98
CTK3	YML112W	SIP2	P34164	415 aa	Known RBP	2.71	□□□□□ -1.98
CTK3	YML112W	MTR2	P34232	184 aa	Known RBP	2.71	□□□□□ -1.98
CTK3	YML112W	ECM15	P35195	104 aa		2.71	□□□□□ -1.98
CTK3	YML112W	TPM2	P40414	161 aa		2.71	□□□□□ -1.98
CTK3	YML112W	RPR2	P40571	144 aa		2.71	□□□□□ -1.98
CTK3	YML112W	YJL213W	P40896	331 aa		2.71	□□□□□ -1.98
CTK3	YML112W	COS10	P52924	374 aa		2.71	□□□□□ -1.98
CTK3	YML112W	SMM1	P53720	384 aa	Known RBP	2.71	□□□□□ -1.98
CTK3	YML112W	BOR1	P53838	576 aa		2.71	□□□□□ -1.98
CTK3	YML112W	YVH1	Q02256	364 aa	Known RBP	2.71	□□□□□ -1.98
CTK3	YML112W	YPL014W	Q02606	381 aa		2.71	□□□□□ -1.98
CTK3	YML112W	ATG16	Q03818	150 aa		2.71	□□□□□ -1.98
CTK3	YML112W	YMR087W	Q04299	284 aa		2.71	□□□□□ -1.98
CTK3	YML112W	ERP1	Q05359	219 aa	Known RBP	2.71	□□□□□ -1.98
CTK3	YML112W	GLO2	Q05584	274 aa		2.71	□□□□□ -1.98
CTK3	YML112W	TEN1	Q07921	160 aa		2.71	□□□□□ -1.98
CTK3	YML112W	CDC45	Q08032	650 aa		2.71	□□□□□ -1.98
CTK3	YML112W	SET6	Q12529	373 aa		2.71	□□□□□ -1.98
CTK3	YML112W	MTF1	P14908	341 aa	Known RBP	2.7	□□□□□ -1.98
CTK3	YML112W	ADH7	P25377	361 aa		2.7	□□□□□ -1.98
CTK3	YML112W	AGA1	P32323	725 aa		2.7	□□□□□ -1.98
CTK3	YML112W	SPC110	P32380	944 aa		2.7	□□□□□ -1.98
CTK3	YML112W	CBF2	P32504	956 aa		2.7	□□□□□ -1.98
CTK3	YML112W	PTR2	P32901	601 aa		2.7	□□□□□ -1.98
CTK3	YML112W	AGP2	P38090	596 aa		2.7	□□□□□ -1.98
CTK3	YML112W	AVT5	P38176	459 aa		2.7	□□□□□ -1.98
CTK3	YML112W	YBP1	P38315	674 aa		2.7	□□□□□ -1.98
CTK3	YML112W	YJR008W	P47085	338 aa		2.7	□□□□□ -1.98
CTK3	YML112W	RTT109	Q07794	436 aa		2.7	□□□□□ -1.98
CTK3	YML112W	TCO89	Q08921	799 aa		2.7	□□□□□ -1.98
CTK3	YML112W	SAN1	P22470	610 aa		2.69	□□□□□ -1.98
CTK3	YML112W	RRN3	P36070	627 aa		2.69	□□□□□ -1.98
CTK3	YML112W	MTC4	P38335	694 aa	Known RBP	2.69	□□□□□ -1.98
CTK3	YML112W	CSM2	P40465	213 aa		2.69	□□□□□ -1.98
CTK3	YML112W	PTR3	P43606	678 aa		2.69	□□□□□ -1.98
CTK3	YML112W	SIP4	P46954	829 aa		2.69	□□□□□ -1.98
CTK3	YML112W	LYS4	P49367	693 aa	Predicted RBP	2.69	□□□□□ -1.98
CTK3	YML112W	CBK1	P53894	756 aa		2.69	□□□□□ -1.98
CTK3	YML112W	RHO4	Q00246	291 aa		2.69	□□□□□ -1.98
CTK3	YML112W	DPB4	Q04603	196 aa	Known RBP	2.69	□□□□□ -1.98
CTK3	YML112W	SMA2	Q04658	369 aa		2.69	□□□□□ -1.98
CTK3	YML112W	RIX7	Q07844	837 aa	Known RBP	2.69	□□□□□ -1.98
CTK3	YML112W	ETT1	Q08421	412 aa	Known RBP	2.69	□□□□□ -1.98
CTK3	YML112W	BUD5	P25300	642 aa	Predicted RBP	2.68	□□□□□ -1.98
CTK3	YML112W	YJL132W	P47014	750 aa		2.68	□□□□□ -1.98
CTK3	YML112W	DUG3	P53871	357 aa		2.68	□□□□□ -1.98
CTK3	YML112W	VIP1	Q06685	1146 aa	Known RBP	2.68	□□□□□ -1.98
CTK3	YML112W	ENT4	Q07872	247 aa		2.68	□□□□□ -1.98
CTK3	YML112W	SDH5	Q08230	162 aa		2.68	□□□□□ -1.98
CTK3	YML112W	YLL056C	Q12177	298 aa		2.68	□□□□□ -1.98
CTK3	YML112W	AYT1	Q12226	474 aa		2.68	□□□□□ -1.98
CTK3	YML112W	PEP5	P12868	1029 aa		2.67	□□□□□ -1.98
CTK3	YML112W	APE1	P14904	514 aa		2.67	□□□□□ -1.98
CTK3	YML112W	KGD1	P20967	1014 aa	Known RBP	2.67	□□□□□ -1.98
CTK3	YML112W	SGV1	P23293	657 aa	Known RBP	2.67	□□□□□ -1.98
CTK3	YML112W	SYN8	P31377	255 aa		2.67	□□□□□ -1.98
CTK3	YML112W	YKL100C	P34248	587 aa		2.67	□□□□□ -1.98
CTK3	YML112W	MAL33	P38157	468 aa		2.67	□□□□□ -1.98
CTK3	YML112W	ICS2	P38284	255 aa		2.67	□□□□□ -1.98
CTK3	YML112W	OSH3	P38713	996 aa	Known RBP	2.67	□□□□□ -1.98
CTK3	YML112W	VPS52	P39904	641 aa		2.67	□□□□□ -1.98
CTK3	YML112W	NPR2	P39923	615 aa		2.67	□□□□□ -1.98
CTK3	YML112W	YPI1	P43587	155 aa		2.67	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms