RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	ISY1	P21374	235 aa	Predicted RBP	6.57	□□□□□ -1.36
TIF1	YKR059W	CLB3	P24870	427 aa		6.57	□□□□□ -1.36
TIF1	YKR059W	CDC15	P27636	974 aa		6.57	□□□□□ -1.36
TIF1	YKR059W	PRR1	P28708	518 aa		6.57	□□□□□ -1.36
TIF1	YKR059W	BRF1	P29056	596 aa		6.57	□□□□□ -1.36
TIF1	YKR059W	TSA1	P34760	196 aa	Known RBP	6.57	□□□□□ -1.36
TIF1	YKR059W	ERC1	P38767	581 aa		6.57	□□□□□ -1.36
TIF1	YKR059W	GDI1	P39958	451 aa	Known RBP	6.57	□□□□□ -1.36
TIF1	YKR059W	PIG2	P40187	538 aa		6.57	□□□□□ -1.36
TIF1	YKR059W	BTT1	P40314	149 aa	Predicted RBP	6.57	□□□□□ -1.36
TIF1	YKR059W	PFK26	P40433	827 aa	Known RBP	6.57	□□□□□ -1.36
TIF1	YKR059W	AAD10	P47182	288 aa		6.57	□□□□□ -1.36
TIF1	YKR059W	MTG1	Q03151	367 aa	Predicted RBP	6.57	□□□□□ -1.36
TIF1	YKR059W	CWC21	Q03375	135 aa	Known RBP	6.57	□□□□□ -1.36
TIF1	YKR059W	TDA6	Q06466	467 aa		6.57	□□□□□ -1.36
TIF1	YKR059W	TMA16	Q08687	178 aa		6.57	□□□□□ -1.36
TIF1	YKR059W	TCO89	Q08921	799 aa		6.57	□□□□□ -1.36
TIF1	YKR059W	TGL5	Q12043	749 aa		6.57	□□□□□ -1.36
TIF1	YKR059W	LAA1	P39526	2014 aa		6.56	□□□□□ -1.36
TIF1	YKR059W	TUP1	P16649	713 aa		6.56	□□□□□ -1.36
TIF1	YKR059W	PDE1	P22434	369 aa		6.56	□□□□□ -1.36
TIF1	YKR059W	SPO11	P23179	398 aa		6.56	□□□□□ -1.36
TIF1	YKR059W	ERG8	P24521	451 aa		6.56	□□□□□ -1.36
TIF1	YKR059W	MNE1	P24720	663 aa		6.56	□□□□□ -1.36
TIF1	YKR059W	RPN2	P32565	945 aa	Known RBP	6.56	□□□□□ -1.36
TIF1	YKR059W	KAE1	P36132	386 aa		6.56	□□□□□ -1.36
TIF1	YKR059W	DUG2	P38149	878 aa		6.56	□□□□□ -1.36
TIF1	YKR059W	EHT1	P38295	451 aa		6.56	□□□□□ -1.36
TIF1	YKR059W	COS111	P38308	924 aa		6.56	□□□□□ -1.36
TIF1	YKR059W	YDL183C	P48569	320 aa		6.56	□□□□□ -1.36
TIF1	YKR059W	ASN1	P49089	572 aa	Known RBP	6.56	□□□□□ -1.36
TIF1	YKR059W	ORC5	P50874	479 aa		6.56	□□□□□ -1.36
TIF1	YKR059W	TEX1	P53851	422 aa	Known RBP	6.56	□□□□□ -1.36
TIF1	YKR059W	YML119W	Q03208	357 aa		6.56	□□□□□ -1.36
TIF1	YKR059W	ROT1	Q03691	256 aa		6.56	□□□□□ -1.36
TIF1	YKR059W	CET1	O13297	549 aa	Predicted RBP	6.55	□□□□□ -1.36
TIF1	YKR059W	RNR2	P09938	399 aa	Known RBP	6.55	□□□□□ -1.36
TIF1	YKR059W	PRP4	P20053	465 aa	Known RBP	6.55	□□□□□ -1.36
TIF1	YKR059W	STE11	P23561	717 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	NTH1	P32356	751 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	DSS4	P32601	143 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	ALY1	P36117	915 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	POP2	P39008	433 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	YIL077C	P40508	320 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	YJL055W	P47044	245 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	STB4	P50104	949 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	YGR066C	P53242	292 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	SNO2	P53823	222 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	IMP4	P53941	290 aa	Known RBP	6.55	□□□□□ -1.36
TIF1	YKR059W	MUB1	Q03162	620 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	GYL1	Q04322	720 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	YDL057W	Q07379	328 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	RXT3	Q07458	294 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	SHS1	Q07657	551 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	YPL150W	Q12152	901 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	NPC2	Q12408	173 aa		6.55	□□□□□ -1.36
TIF1	YKR059W	HRP1	Q99383	534 aa	Known RBP	6.55	□□□□□ -1.36
TIF1	YKR059W	STF1	P01098	86 aa		6.54	□□□□□ -1.36
TIF1	YKR059W	NAT1	P12945	854 aa	Known RBP	6.54	□□□□□ -1.36
TIF1	YKR059W	VPS34	P22543	875 aa		6.54	□□□□□ -1.36
TIF1	YKR059W	KES1	P35844	434 aa	Known RBP	6.54	□□□□□ -1.36
TIF1	YKR059W	SHE3	P38272	425 aa	Known RBP	6.54	□□□□□ -1.36
TIF1	YKR059W	LNP1	P38878	278 aa		6.54	□□□□□ -1.36
TIF1	YKR059W	YFL066C	P43538	392 aa		6.54	□□□□□ -1.36
TIF1	YKR059W	CHA4	P43634	648 aa		6.54	□□□□□ -1.36
TIF1	YKR059W	GLO1	P50107	326 aa		6.54	□□□□□ -1.36
TIF1	YKR059W	TMN2	Q04562	672 aa		6.54	□□□□□ -1.36
TIF1	YKR059W	YFT2	Q06676	274 aa		6.54	□□□□□ -1.36
TIF1	YKR059W	PSR1	Q07800	427 aa		6.54	□□□□□ -1.36
TIF1	YKR059W	NOP12	Q08208	459 aa	Known RBP	6.54	□□□□□ -1.36
TIF1	YKR059W	TAF10	Q12030	206 aa		6.54	□□□□□ -1.36
TIF1	YKR059W	LPX1	Q12405	387 aa	Known RBP	6.54	□□□□□ -1.36
TIF1	YKR059W	ASP3-2	P0CX77	362 aa		6.53	□□□□□ -1.36
TIF1	YKR059W	ASP3-3	P0CX78	362 aa		6.53	□□□□□ -1.36
TIF1	YKR059W	ASP3-4	P0CX79	362 aa		6.53	□□□□□ -1.36
TIF1	YKR059W	ASP3-1	P0CZ17	362 aa		6.53	□□□□□ -1.36
TIF1	YKR059W	RPL4A	P10664	362 aa	Known RBP	6.53	□□□□□ -1.36
TIF1	YKR059W	ERG6	P25087	383 aa	Known RBP	6.53	□□□□□ -1.36
TIF1	YKR059W	STE50	P25344	346 aa		6.53	□□□□□ -1.36
TIF1	YKR059W	PRE2	P30656	287 aa	Known RBP	6.53	□□□□□ -1.36
TIF1	YKR059W	GPI10	P30777	616 aa		6.53	□□□□□ -1.36
TIF1	YKR059W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	6.53	□□□□□ -1.36	not detected
TIF1	YKR059W	SLZ1	P40167	298 aa		6.53	□□□□□ -1.36
TIF1	YKR059W	RPL4B	P49626	362 aa	Known RBP	6.53	□□□□□ -1.36
TIF1	YKR059W	TOF1	P53840	1238 aa		6.53	□□□□□ -1.36
TIF1	YKR059W	HOF1	Q05080	669 aa		6.53	□□□□□ -1.36
TIF1	YKR059W	YDR286C	Q05530	114 aa		6.53	□□□□□ -1.36
TIF1	YKR059W	BSP1	Q06604	576 aa		6.53	□□□□□ -1.36
TIF1	YKR059W	SMF3	Q12078	473 aa	Predicted RBP	6.53	□□□□□ -1.36
TIF1	YKR059W	SWT1	Q12104	458 aa		6.53	□□□□□ -1.36
TIF1	YKR059W	GCD1	P09032	578 aa	Predicted RBP	6.52	□□□□□ -1.37
TIF1	YKR059W	FPR1	P20081	114 aa	Known RBP	6.52	□□□□□ -1.37
TIF1	YKR059W	AAD3	P25612	363 aa		6.52	□□□□□ -1.37
TIF1	YKR059W	OTU2	P38747	307 aa	Known RBP	6.52	□□□□□ -1.37
TIF1	YKR059W	ARB1	P40024	610 aa	Known RBP	6.52	□□□□□ -1.37
TIF1	YKR059W	GET2	P40056	285 aa		6.52	□□□□□ -1.37
TIF1	YKR059W	TMN3	P40071	706 aa		6.52	□□□□□ -1.37
TIF1	YKR059W	SEC28	P40509	296 aa	Known RBP	6.52	□□□□□ -1.37
TIF1	YKR059W	AMA1	P50082	593 aa		6.52	□□□□□ -1.37
TIF1	YKR059W	COS12	P53053	380 aa		6.52	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms