RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W FKH2P41813 862 aa3.79□□□□□ -1.8
UBP12YJL197W EPL1P43572 832 aa3.79□□□□□ -1.8
UBP12YJL197W DPB11P47027 764 aaPredicted RBP3.79□□□□□ -1.8
UBP12YJL197W DUS4Q06063 367 aa3.79□□□□□ -1.8
UBP12YJL197W YPL216WQ08964 1102 aa3.79□□□□□ -1.8
UBP12YJL197W GCD2P12754 651 aaPredicted RBP3.79□□□□□ -1.8
UBP12YJL197W SPO7P18410 259 aa3.79□□□□□ -1.8
UBP12YJL197W SRP54P20424 541 aaKnown RBP3.79□□□□□ -1.8
UBP12YJL197W CNE1P27825 502 aa3.79□□□□□ -1.8
UBP12YJL197W FAA1P30624 700 aaKnown RBP3.79□□□□□ -1.8
UBP12YJL197W UGP1P32861 499 aaKnown RBP3.79□□□□□ -1.8
UBP12YJL197W SNU114P36048 1008 aaKnown RBP3.79□□□□□ -1.8
UBP12YJL197W BUR6P40096 142 aa3.79□□□□□ -1.8
UBP12YJL197W NET1P47035 1189 aa3.79□□□□□ -1.8
UBP12YJL197W UBX6P47049 396 aa3.79□□□□□ -1.8
UBP12YJL197W EFM3P47163 339 aa3.79□□□□□ -1.8
UBP12YJL197W RPS7BP48164 190 aaKnown RBP3.79□□□□□ -1.8
UBP12YJL197W YNL143CP53908 130 aa3.79□□□□□ -1.8
UBP12YJL197W RPS15Q01855 142 aaKnown RBP3.79□□□□□ -1.8
UBP12YJL197W CRT10Q08226 957 aa3.79□□□□□ -1.8
UBP12YJL197W SAC3P46674 1301 aa3.78□□□□□ -1.8
UBP12YJL197W ILV2P07342 687 aaKnown RBP3.78□□□□□ -1.8
UBP12YJL197W GCD1P09032 578 aaPredicted RBP3.78□□□□□ -1.8
UBP12YJL197W ART10P18634 518 aaKnown RBP3.78□□□□□ -1.8
UBP12YJL197W LAS21P40367 830 aa3.78□□□□□ -1.8
UBP12YJL197W LOC1P43586 204 aaPredicted RBP3.78□□□□□ -1.8
UBP12YJL197W COP1P53622 1201 aaKnown RBP3.78□□□□□ -1.8
UBP12YJL197W PFK27Q12471 397 aaPredicted RBP3.78□□□□□ -1.8
UBP12YJL197W SUP35P05453 685 aaKnown RBP3.78□□□□□ -1.8
UBP12YJL197W CLN1P20437 546 aa3.78□□□□□ -1.8
UBP12YJL197W SIP1P32578 815 aa3.78□□□□□ -1.8
UBP12YJL197W CAB3P36076 571 aa3.78□□□□□ -1.8
UBP12YJL197W ELP2P42935 788 aa3.78□□□□□ -1.8
UBP12YJL197W AGX1P43567 385 aa3.78□□□□□ -1.8
UBP12YJL197W RPA34P47006 233 aaPredicted RBP3.78□□□□□ -1.8
UBP12YJL197W MCM6P53091 1017 aaKnown RBP3.78□□□□□ -1.8
UBP12YJL197W PDS5Q04264 1277 aa3.78□□□□□ -1.8
UBP12YJL197W VPS20Q04272 221 aa3.78□□□□□ -1.8
UBP12YJL197W TAP42Q04372 366 aa3.78□□□□□ -1.8
UBP12YJL197W INP53Q12271 1107 aa3.78□□□□□ -1.8
UBP12YJL197W CBP2P03874 630 aaPredicted RBP3.78□□□□□ -1.8
UBP12YJL197W CHO2P05374 869 aaKnown RBP3.78□□□□□ -1.8
UBP12YJL197W ABF1P14164 731 aa3.78□□□□□ -1.8
UBP12YJL197W CRM1P30822 1084 aaKnown RBP3.78□□□□□ -1.8
UBP12YJL197W GSH1P32477 678 aa3.78□□□□□ -1.8
UBP12YJL197W MNN2P38069 597 aa3.78□□□□□ -1.8
UBP12YJL197W UBC11P52492 156 aa3.78□□□□□ -1.8
UBP12YJL197W VPS73P53142 486 aaKnown RBP3.78□□□□□ -1.8
UBP12YJL197W TGS1Q12052 315 aa3.78□□□□□ -1.8
UBP12YJL197W YLR122CQ12312 125 aa3.78□□□□□ -1.8
UBP12YJL197W SPS4P09937 338 aa3.77□□□□□ -1.81
UBP12YJL197W ARO3P14843 370 aaKnown RBP3.77□□□□□ -1.81
UBP12YJL197W UBA1P22515 1024 aaKnown RBP3.77□□□□□ -1.81
UBP12YJL197W SOF1P33750 489 aaKnown RBP3.77□□□□□ -1.81
UBP12YJL197W YBR053CP38235 358 aa3.77□□□□□ -1.81
UBP12YJL197W YHL017WP38745 532 aa3.77□□□□□ -1.81
UBP12YJL197W IPI3P53877 555 aa3.77□□□□□ -1.81
UBP12YJL197W ROT1Q03691 256 aa3.77□□□□□ -1.81
UBP12YJL197W YMR130WQ04223 302 aa3.77□□□□□ -1.81
UBP12YJL197W RGC1Q06108 1083 aaKnown RBP3.77□□□□□ -1.81
UBP12YJL197W ACK1Q07622 623 aaPredicted RBP3.77□□□□□ -1.81
UBP12YJL197W SLK19Q08581 821 aaKnown RBP3.77□□□□□ -1.81
UBP12YJL197W MET3P08536 511 aa3.77□□□□□ -1.81
UBP12YJL197W MCM4P30665 933 aaKnown RBP3.77□□□□□ -1.81
UBP12YJL197W YME1P32795 747 aa3.77□□□□□ -1.81
UBP12YJL197W SER3P40054 469 aa3.77□□□□□ -1.81
UBP12YJL197W PRY1P47032 299 aa3.77□□□□□ -1.81
UBP12YJL197W ECM27P47144 725 aa3.77□□□□□ -1.81
UBP12YJL197W CTH1P47976 325 aa3.77□□□□□ -1.81
UBP12YJL197W RPC11Q04307 110 aaPredicted RBP3.77□□□□□ -1.81
UBP12YJL197W HPF1Q05164 967 aa3.77□□□□□ -1.81
UBP12YJL197W KAP95Q06142 861 aaKnown RBP3.77□□□□□ -1.81
UBP12YJL197W NDL1Q06568 189 aa3.77□□□□□ -1.81
UBP12YJL197W AAC1P04710 309 aa3.77□□□□□ -1.81
UBP12YJL197W MRP13P12686 339 aa3.77□□□□□ -1.81
UBP12YJL197W URA4P20051 364 aa3.77□□□□□ -1.81
UBP12YJL197W MEF2P39677 819 aa3.77□□□□□ -1.81
UBP12YJL197W ECM10P39987 644 aa3.77□□□□□ -1.81
UBP12YJL197W NPA3P47122 385 aa3.77□□□□□ -1.81
UBP12YJL197W RMD9P53140 646 aaKnown RBP3.77□□□□□ -1.81
UBP12YJL197W DLT1Q04216 342 aa3.77□□□□□ -1.81
UBP12YJL197W YDL242WQ07746 117 aa3.77□□□□□ -1.81
UBP12YJL197W GSH2Q08220 491 aa3.77□□□□□ -1.81
UBP12YJL197W DFG16Q99234 619 aa3.77□□□□□ -1.81
UBP12YJL197W PET123P17558 318 aa3.76□□□□□ -1.81
UBP12YJL197W RDS1P25611 832 aa3.76□□□□□ -1.81
UBP12YJL197W IMG1P25626 169 aa3.76□□□□□ -1.81
UBP12YJL197W NTG1P31378 399 aa3.76□□□□□ -1.81
UBP12YJL197W LHS1P36016 881 aa3.76□□□□□ -1.81
UBP12YJL197W MSR1P38714 643 aa3.76□□□□□ -1.81
UBP12YJL197W TOM71P38825 639 aaKnown RBP3.76□□□□□ -1.81
UBP12YJL197W YJL107CP42947 387 aa3.76□□□□□ -1.81
UBP12YJL197W MFM1Q02783 413 aa3.76□□□□□ -1.81
UBP12YJL197W GCN5Q03330 439 aa3.76□□□□□ -1.81
UBP12YJL197W MRPL1Q04599 285 aa3.76□□□□□ -1.81
UBP12YJL197W YDR215CQ12240 137 aa3.76□□□□□ -1.81
UBP12YJL197W SGS1P35187 1447 aa3.76□□□□□ -1.81
UBP12YJL197W PCT1P13259 424 aa3.76□□□□□ -1.81
UBP12YJL197W PET18P25362 215 aa3.76□□□□□ -1.81
UBP12YJL197W FUB1P25659 250 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms