RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W CBP1P07252 654 aa2.58□□□□□ -2
PEP8YJL053W YML002WP0CF17 737 aa2.58□□□□□ -2
PEP8YJL053W AAC3P18238 307 aa2.58□□□□□ -2
PEP8YJL053W SUI2P20459 304 aaKnown RBP2.58□□□□□ -2
PEP8YJL053W YCK1P23291 538 aa2.58□□□□□ -2
PEP8YJL053W IMP2'P32351 346 aa2.58□□□□□ -2
PEP8YJL053W SWE1P32944 819 aa2.58□□□□□ -2
PEP8YJL053W TIF3P34167 436 aaKnown RBP2.58□□□□□ -2
PEP8YJL053W AUR1P36107 401 aaPredicted RBP2.58□□□□□ -2
PEP8YJL053W MNN2P38069 597 aa2.58□□□□□ -2
PEP8YJL053W YPK3P38070 525 aa2.58□□□□□ -2
PEP8YJL053W TSC10P38342 320 aa2.58□□□□□ -2
PEP8YJL053W ELO1P39540 310 aa2.58□□□□□ -2
PEP8YJL053W ERG26P53199 349 aaKnown RBP2.58□□□□□ -2
PEP8YJL053W YKU80Q04437 629 aa2.58□□□□□ -2
PEP8YJL053W DPB4Q04603 196 aaKnown RBP2.58□□□□□ -2
PEP8YJL053W ARP9Q05123 467 aa2.58□□□□□ -2
PEP8YJL053W ATG26Q06321 1198 aa2.58□□□□□ -2
PEP8YJL053W YDL218WQ07629 317 aa2.58□□□□□ -2
PEP8YJL053W FMP40Q08968 688 aaPredicted RBP2.58□□□□□ -2
PEP8YJL053W RRI2Q12348 645 aa2.58□□□□□ -2
PEP8YJL053W ARD1P07347 238 aaPredicted RBP2.57□□□□□ -2
PEP8YJL053W POL4P25615 582 aa2.57□□□□□ -2
PEP8YJL053W CPR3P25719 182 aa2.57□□□□□ -2
PEP8YJL053W YKL100CP34248 587 aa2.57□□□□□ -2
PEP8YJL053W MRPL4P36517 319 aa2.57□□□□□ -2
PEP8YJL053W REG2P38232 338 aa2.57□□□□□ -2
PEP8YJL053W ICS2P38284 255 aa2.57□□□□□ -2
PEP8YJL053W RRP3P38712 501 aaKnown RBP2.57□□□□□ -2
PEP8YJL053W VID30P53076 958 aa2.57□□□□□ -2
PEP8YJL053W YGR066CP53242 292 aa2.57□□□□□ -2
PEP8YJL053W EFM6P53970 246 aa2.57□□□□□ -2
PEP8YJL053W MAK10Q02197 733 aa2.57□□□□□ -2
PEP8YJL053W YDR415CQ04033 374 aaPredicted RBP2.57□□□□□ -2
PEP8YJL053W ECM30Q06673 1274 aa2.57□□□□□ -2
PEP8YJL053W GRC3Q07845 632 aa2.57□□□□□ -2
PEP8YJL053W TEN1Q07921 160 aa2.57□□□□□ -2
PEP8YJL053W RDR1Q08904 546 aa2.57□□□□□ -2
PEP8YJL053W GCN4P03069 281 aa2.56□□□□□ -2
PEP8YJL053W PUT2P07275 575 aa2.56□□□□□ -2
PEP8YJL053W HSC82P15108 705 aaKnown RBP2.56□□□□□ -2
PEP8YJL053W CDC23P16522 626 aa2.56□□□□□ -2
PEP8YJL053W KAR3P17119 729 aa2.56□□□□□ -2
PEP8YJL053W BOS1P25385 244 aa2.56□□□□□ -2
PEP8YJL053W SGF29P25554 259 aa2.56□□□□□ -2
PEP8YJL053W GID7P25569 745 aa2.56□□□□□ -2
PEP8YJL053W PGS1P25578 521 aa2.56□□□□□ -2
PEP8YJL053W IMG1P25626 169 aa2.56□□□□□ -2
PEP8YJL053W PEP3P27801 918 aa2.56□□□□□ -2
PEP8YJL053W SSE2P32590 693 aaKnown RBP2.56□□□□□ -2
PEP8YJL053W ANS1P38832 159 aa2.56□□□□□ -2
PEP8YJL053W PHO90P39535 881 aa2.56□□□□□ -2
PEP8YJL053W RGI2P40188 164 aa2.56□□□□□ -2
PEP8YJL053W YJL070CP40361 888 aa2.56□□□□□ -2
PEP8YJL053W MKT1P40850 830 aaKnown RBP2.56□□□□□ -2
PEP8YJL053W RMD8P43620 662 aa2.56□□□□□ -2
PEP8YJL053W UPF3P48412 387 aaKnown RBP2.56□□□□□ -2
PEP8YJL053W CUL3P53202 744 aa2.56□□□□□ -2
PEP8YJL053W YMR160WQ03823 816 aa2.56□□□□□ -2
PEP8YJL053W RSF1Q05043 376 aa2.56□□□□□ -2
PEP8YJL053W LUC7Q07508 261 aaPredicted RBP2.56□□□□□ -2
PEP8YJL053W CDC45Q08032 650 aa2.56□□□□□ -2
PEP8YJL053W BSC6Q08280 497 aa2.56□□□□□ -2
PEP8YJL053W CTI6Q08923 506 aa2.56□□□□□ -2
PEP8YJL053W NMD4Q12129 218 aa2.56□□□□□ -2
PEP8YJL053W MRP7P12687 371 aa2.55□□□□□ -2
PEP8YJL053W BUD5P25300 642 aaPredicted RBP2.55□□□□□ -2
PEP8YJL053W OCA4P25366 362 aa2.55□□□□□ -2
PEP8YJL053W PUP3P25451 205 aaKnown RBP2.55□□□□□ -2
PEP8YJL053W CMK1P27466 446 aaKnown RBP2.55□□□□□ -2
PEP8YJL053W PRO3P32263 286 aaKnown RBP2.55□□□□□ -2
PEP8YJL053W RPN12P32496 274 aa2.55□□□□□ -2
PEP8YJL053W PDR3P33200 976 aa2.55□□□□□ -2
PEP8YJL053W YBL055CP34220 418 aaPredicted RBP2.55□□□□□ -2
PEP8YJL053W SEF1P34228 1148 aa2.55□□□□□ -2
PEP8YJL053W MIC60P36112 540 aa2.55□□□□□ -2
PEP8YJL053W ROT2P38138 954 aa2.55□□□□□ -2
PEP8YJL053W YIL060WP40519 144 aa2.55□□□□□ -2
PEP8YJL053W RTS2P40962 232 aa2.55□□□□□ -2
PEP8YJL053W LYS4P49367 693 aaPredicted RBP2.55□□□□□ -2
PEP8YJL053W DSD1P53095 428 aa2.55□□□□□ -2
PEP8YJL053W YGL082WP53155 381 aa2.55□□□□□ -2
PEP8YJL053W SOL4P53315 255 aa2.55□□□□□ -2
PEP8YJL053W ESBP6P53918 673 aa2.55□□□□□ -2
PEP8YJL053W NGL3Q03210 505 aa2.55□□□□□ -2
PEP8YJL053W EKI1Q03764 534 aa2.55□□□□□ -2
PEP8YJL053W YMR254CQ04838 102 aa2.55□□□□□ -2
PEP8YJL053W TSR2Q06672 205 aaKnown RBP2.55□□□□□ -2
PEP8YJL053W SSK1Q07084 712 aa2.55□□□□□ -2
PEP8YJL053W SDH5Q08230 162 aa2.55□□□□□ -2
PEP8YJL053W YOL159CQ08300 171 aa2.55□□□□□ -2
PEP8YJL053W YJR112W-AQ3E743 109 aa2.55□□□□□ -2
PEP8YJL053W SNF3P10870 884 aa2.54□□□□□ -2
PEP8YJL053W CBS1P14066 229 aa2.54□□□□□ -2
PEP8YJL053W OLE1P21147 510 aaKnown RBP2.54□□□□□ -2
PEP8YJL053W MGR1P25573 417 aa2.54□□□□□ -2
PEP8YJL053W MCM4P30665 933 aaKnown RBP2.54□□□□□ -2
PEP8YJL053W SNC1P31109 117 aa2.54□□□□□ -2
PEP8YJL053W RAD24P32641 659 aa2.54□□□□□ -2
PEP8YJL053W YBR144CP34215 104 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 66 ms