RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C UAF30Q08747 228 aa7.56□□□□□ -1.2
SNP1YIL061C TPK2P06245 380 aa7.55□□□□□ -1.2
SNP1YIL061C MRPS28P21771 286 aa7.55□□□□□ -1.2
SNP1YIL061C STE14P32584 239 aa7.55□□□□□ -1.2
SNP1YIL061C IRS4P36115 615 aaKnown RBP7.55□□□□□ -1.2
SNP1YIL061C CAF4P36130 643 aa7.55□□□□□ -1.2
SNP1YIL061C RPH1P39956 796 aa7.55□□□□□ -1.2
SNP1YIL061C IMA5P40884 581 aa7.55□□□□□ -1.2
SNP1YIL061C FKH2P41813 862 aa7.55□□□□□ -1.2
SNP1YIL061C MPS3P47069 682 aa7.55□□□□□ -1.2
SNP1YIL061C YJR124CP47159 448 aa7.55□□□□□ -1.2
SNP1YIL061C TIS11P47977 285 aa7.55□□□□□ -1.2
SNP1YIL061C GET1P53192 235 aa7.55□□□□□ -1.2
SNP1YIL061C PRM1P53835 661 aa7.55□□□□□ -1.2
SNP1YIL061C PEX13P80667 386 aa7.55□□□□□ -1.2
SNP1YIL061C PRP38Q00723 242 aaPredicted RBP7.55□□□□□ -1.2
SNP1YIL061C TRM12Q04235 462 aa7.55□□□□□ -1.2
SNP1YIL061C YMR111CQ04461 462 aaPredicted RBP7.55□□□□□ -1.2
SNP1YIL061C SGT1Q08446 395 aa7.55□□□□□ -1.2
SNP1YIL061C MUM3Q08750 479 aa7.55□□□□□ -1.2
SNP1YIL061C LEU1P07264 779 aaKnown RBP7.54□□□□□ -1.2
SNP1YIL061C COS2P0CX12 379 aa7.54□□□□□ -1.2
SNP1YIL061C COS3P0CX13 379 aa7.54□□□□□ -1.2
SNP1YIL061C GUK1P15454 187 aaKnown RBP7.54□□□□□ -1.2
SNP1YIL061C CCA1P21269 546 aa7.54□□□□□ -1.2
SNP1YIL061C TIP20P33891 701 aa7.54□□□□□ -1.2
SNP1YIL061C YKR078WP36158 585 aaKnown RBP7.54□□□□□ -1.2
SNP1YIL061C CYC2P38909 366 aa7.54□□□□□ -1.2
SNP1YIL061C DUN1P39009 513 aa7.54□□□□□ -1.2
SNP1YIL061C DHH1P39517 506 aaKnown RBP7.54□□□□□ -1.2
SNP1YIL061C GIP4P39732 760 aa7.54□□□□□ -1.2
SNP1YIL061C SEC26P41810 973 aaKnown RBP7.54□□□□□ -1.2
SNP1YIL061C GCD10P41814 478 aa7.54□□□□□ -1.2
SNP1YIL061C YRB1P41920 201 aaKnown RBP7.54□□□□□ -1.2
SNP1YIL061C COS4P43542 379 aa7.54□□□□□ -1.2
SNP1YIL061C GAT1P43574 510 aa7.54□□□□□ -1.2
SNP1YIL061C MTR3P48240 250 aaPredicted RBP7.54□□□□□ -1.2
SNP1YIL061C SPC105P53148 917 aa7.54□□□□□ -1.2
SNP1YIL061C ECM9Q02202 377 aa7.54□□□□□ -1.2
SNP1YIL061C NAN1Q02931 896 aaKnown RBP7.54□□□□□ -1.2
SNP1YIL061C CLP1Q08685 445 aaPredicted RBP7.54□□□□□ -1.2
SNP1YIL061C YOR012WQ12351 137 aa7.54□□□□□ -1.2
SNP1YIL061C YBL029C-AQ3E756 94 aa7.54□□□□□ -1.2
SNP1YIL061C UGA1P17649 471 aa7.53□□□□□ -1.2
SNP1YIL061C CIN8P27895 1000 aa7.53□□□□□ -1.2
SNP1YIL061C SFP1P32432 683 aa7.53□□□□□ -1.2
SNP1YIL061C ROT2P38138 954 aa7.53□□□□□ -1.2
SNP1YIL061C HSE1P38753 452 aa7.53□□□□□ -1.2
SNP1YIL061C MNT2P53059 558 aa7.53□□□□□ -1.2
SNP1YIL061C TUB4P53378 473 aa7.53□□□□□ -1.2
SNP1YIL061C MMT1Q03218 510 aa7.53□□□□□ -1.2
SNP1YIL061C PER33Q12144 273 aa7.53□□□□□ -1.2
SNP1YIL061C MCD1Q12158 566 aa7.53□□□□□ -1.2
SNP1YIL061C SUC2P00724 532 aa7.52□□□□□ -1.21
SNP1YIL061C HXK2P04807 486 aaKnown RBP7.52□□□□□ -1.21
SNP1YIL061C HTA2P04912 132 aa7.52□□□□□ -1.21
SNP1YIL061C MSS18P08593 268 aa7.52□□□□□ -1.21
SNP1YIL061C APA1P16550 321 aaKnown RBP7.52□□□□□ -1.21
SNP1YIL061C YCK2P23292 546 aaKnown RBP7.52□□□□□ -1.21
SNP1YIL061C ERG6P25087 383 aaKnown RBP7.52□□□□□ -1.21
SNP1YIL061C OCA4P25366 362 aa7.52□□□□□ -1.21
SNP1YIL061C SGF29P25554 259 aa7.52□□□□□ -1.21
SNP1YIL061C SYN8P31377 255 aa7.52□□□□□ -1.21
SNP1YIL061C SPT16P32558 1035 aaKnown RBP7.52□□□□□ -1.21
SNP1YIL061C SPS19P32573 292 aaKnown RBP7.52□□□□□ -1.21
SNP1YIL061C COX13P32799 129 aa7.52□□□□□ -1.21
SNP1YIL061C PEX28P38848 579 aa7.52□□□□□ -1.21
SNP1YIL061C DSS1P39112 969 aa7.52□□□□□ -1.21
SNP1YIL061C TIM17P39515 158 aa7.52□□□□□ -1.21
SNP1YIL061C NPT1P39683 429 aaKnown RBP7.52□□□□□ -1.21
SNP1YIL061C ECM10P39987 644 aa7.52□□□□□ -1.21
SNP1YIL061C YER034WP40022 185 aaKnown RBP7.52□□□□□ -1.21
SNP1YIL061C SEC27P41811 889 aaKnown RBP7.52□□□□□ -1.21
SNP1YIL061C PTR3P43606 678 aa7.52□□□□□ -1.21
SNP1YIL061C GLG2P47011 380 aa7.52□□□□□ -1.21
SNP1YIL061C FRE4P53746 719 aa7.52□□□□□ -1.21
SNP1YIL061C YNL033WP53964 284 aa7.52□□□□□ -1.21
SNP1YIL061C YNL019CP53975 284 aa7.52□□□□□ -1.21
SNP1YIL061C NPL3Q01560 414 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
SNP1YIL061C LEE1Q02799 301 aaKnown RBP7.52□□□□□ -1.21
SNP1YIL061C NSE5Q03718 556 aa7.52□□□□□ -1.21
SNP1YIL061C YDR124WQ04608 324 aa7.52□□□□□ -1.21
SNP1YIL061C SSL1Q04673 461 aaPredicted RBP7.52□□□□□ -1.21
SNP1YIL061C CIA1Q05583 330 aa7.52□□□□□ -1.21
SNP1YIL061C GMC2Q06201 188 aa7.52□□□□□ -1.21
SNP1YIL061C VTA1Q06263 330 aa7.52□□□□□ -1.21
SNP1YIL061C BUD7Q08754 746 aa7.52□□□□□ -1.21
SNP1YIL061C TGL5Q12043 749 aa7.52□□□□□ -1.21
SNP1YIL061C HUA2Q12134 243 aa7.52□□□□□ -1.21
SNP1YIL061C JLP1Q12358 412 aa7.52□□□□□ -1.21
SNP1YIL061C GTT2Q12390 233 aa7.52□□□□□ -1.21
SNP1YIL061C YKL018C-AQ3E7A7 99 aa7.52□□□□□ -1.21
SNP1YIL061C UBR1P19812 1950 aa7.51□□□□□ -1.21
SNP1YIL061C PHO5P00635 467 aa7.51□□□□□ -1.21
SNP1YIL061C KIN3P22209 435 aa7.51□□□□□ -1.21
SNP1YIL061C UBA1P22515 1024 aaKnown RBP7.51□□□□□ -1.21
SNP1YIL061C BRF1P29056 596 aa7.51□□□□□ -1.21
SNP1YIL061C YME2P32843 850 aa7.51□□□□□ -1.21
SNP1YIL061C PRP18P33411 251 aaPredicted RBP7.51□□□□□ -1.21
SNP1YIL061C YKL100CP34248 587 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms