RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W ROK1P45818 564 aaPredicted RBP2.23□□□□□ -2.05
SMD1YGR074W PET130P47065 347 aa2.23□□□□□ -2.05
SMD1YGR074W TWF1P53250 332 aa2.23□□□□□ -2.05
SMD1YGR074W OGG1P53397 376 aaPredicted RBP2.23□□□□□ -2.05
SMD1YGR074W YNL234WP53857 426 aa2.23□□□□□ -2.05
SMD1YGR074W DUG3P53871 357 aa2.23□□□□□ -2.05
SMD1YGR074W YVH1Q02256 364 aaKnown RBP2.23□□□□□ -2.05
SMD1YGR074W YMR155WQ03795 547 aa2.23□□□□□ -2.05
SMD1YGR074W FIN1Q03898 291 aa2.23□□□□□ -2.05
SMD1YGR074W SXM1Q04175 944 aaKnown RBP2.23□□□□□ -2.05
SMD1YGR074W ARP10Q04549 284 aa2.23□□□□□ -2.05
SMD1YGR074W PIG1Q06216 648 aa2.23□□□□□ -2.05
SMD1YGR074W GRC3Q07845 632 aa2.23□□□□□ -2.05
SMD1YGR074W TEN1Q07921 160 aa2.23□□□□□ -2.05
SMD1YGR074W RDR1Q08904 546 aa2.23□□□□□ -2.05
SMD1YGR074W ATG9Q12142 997 aa2.23□□□□□ -2.05
SMD1YGR074W SMC6Q12749 1114 aa2.23□□□□□ -2.05
SMD1YGR074W YER145C-AA0A023PYF4 145 aa2.22□□□□□ -2.05
SMD1YGR074W CHO1P08456 276 aa2.22□□□□□ -2.05
SMD1YGR074W GPA1P08539 472 aa2.22□□□□□ -2.05
SMD1YGR074W PDX1P16451 410 aa2.22□□□□□ -2.05
SMD1YGR074W SRV2P17555 526 aaKnown RBP2.22□□□□□ -2.05
SMD1YGR074W CLC1P17891 233 aa2.22□□□□□ -2.05
SMD1YGR074W CNA1P23287 553 aa2.22□□□□□ -2.05
SMD1YGR074W PUP3P25451 205 aaKnown RBP2.22□□□□□ -2.05
SMD1YGR074W ERG3P32353 365 aa2.22□□□□□ -2.05
SMD1YGR074W NFU1P32860 256 aa2.22□□□□□ -2.05
SMD1YGR074W YBL055CP34220 418 aaPredicted RBP2.22□□□□□ -2.05
SMD1YGR074W MIA40P36046 403 aa2.22□□□□□ -2.05
SMD1YGR074W TCD2P36101 447 aaKnown RBP2.22□□□□□ -2.05
SMD1YGR074W RPL32P38061 130 aaKnown RBP2.22□□□□□ -2.05
SMD1YGR074W MNN2P38069 597 aa2.22□□□□□ -2.05
SMD1YGR074W ROT2P38138 954 aa2.22□□□□□ -2.05
SMD1YGR074W MSR1P38714 643 aa2.22□□□□□ -2.05
SMD1YGR074W SMF1P38925 575 aa2.22□□□□□ -2.05
SMD1YGR074W CIN4P39110 191 aa2.22□□□□□ -2.05
SMD1YGR074W MET18P40469 1032 aa2.22□□□□□ -2.05
SMD1YGR074W MET28P40573 187 aa2.22□□□□□ -2.05
SMD1YGR074W AXL1P40851 1208 aa2.22□□□□□ -2.05
SMD1YGR074W MEP2P41948 499 aa2.22□□□□□ -2.05
SMD1YGR074W IMD4P50094 524 aaKnown RBP2.22□□□□□ -2.05
SMD1YGR074W MNP1P53163 194 aaPredicted RBP2.22□□□□□ -2.05
SMD1YGR074W YTP1P53584 459 aa2.22□□□□□ -2.05
SMD1YGR074W RSM23Q01163 450 aa2.22□□□□□ -2.05
SMD1YGR074W YMR160WQ03823 816 aa2.22□□□□□ -2.05
SMD1YGR074W ATG26Q06321 1198 aa2.22□□□□□ -2.05
SMD1YGR074W PFA4Q12006 378 aa2.22□□□□□ -2.05
SMD1YGR074W RLM1Q12224 676 aa2.22□□□□□ -2.05
SMD1YGR074W YLR111WQ12528 110 aa2.22□□□□□ -2.05
SMD1YGR074W SEC39Q12745 709 aa2.22□□□□□ -2.05
SMD1YGR074W YRF1-4O13559 1382 aa2.22□□□□□ -2.05
SMD1YGR074W YMR085WP0CF18 432 aa2.21□□□□□ -2.06
SMD1YGR074W KGD1P20967 1014 aaKnown RBP2.21□□□□□ -2.06
SMD1YGR074W CLB2P24869 491 aa2.21□□□□□ -2.06
SMD1YGR074W SYN8P31377 255 aa2.21□□□□□ -2.06
SMD1YGR074W VMA8P32610 256 aaKnown RBP2.21□□□□□ -2.06
SMD1YGR074W MRE11P32829 692 aa2.21□□□□□ -2.06
SMD1YGR074W PMT1P33775 817 aa2.21□□□□□ -2.06
SMD1YGR074W YKL023WP36103 277 aaKnown RBP2.21□□□□□ -2.06
SMD1YGR074W APE3P37302 537 aaKnown RBP2.21□□□□□ -2.06
SMD1YGR074W TOM71P38825 639 aaKnown RBP2.21□□□□□ -2.06
SMD1YGR074W ANS1P38832 159 aa2.21□□□□□ -2.06
SMD1YGR074W CCT6P39079 546 aa2.21□□□□□ -2.06
SMD1YGR074W YEL057CP39983 233 aa2.21□□□□□ -2.06
SMD1YGR074W SGN1P40561 250 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
SMD1YGR074W CDC1P40986 491 aa2.21□□□□□ -2.06
SMD1YGR074W HXT14P42833 540 aa2.21□□□□□ -2.06
SMD1YGR074W YPT11P48559 417 aa2.21□□□□□ -2.06
SMD1YGR074W YGL082WP53155 381 aa2.21□□□□□ -2.06
SMD1YGR074W YGR126WP53274 230 aa2.21□□□□□ -2.06
SMD1YGR074W CAF130P53280 1122 aaPredicted RBP2.21□□□□□ -2.06
SMD1YGR074W COP1P53622 1201 aaKnown RBP2.21□□□□□ -2.06
SMD1YGR074W TOF2Q02208 771 aa2.21□□□□□ -2.06
SMD1YGR074W VTC3Q02725 835 aa2.21□□□□□ -2.06
SMD1YGR074W CTL1Q03220 320 aaKnown RBP2.21□□□□□ -2.06
SMD1YGR074W VTA1Q06263 330 aa2.21□□□□□ -2.06
SMD1YGR074W POS5Q06892 414 aa2.21□□□□□ -2.06
SMD1YGR074W YDL057WQ07379 328 aa2.21□□□□□ -2.06
SMD1YGR074W FRE3Q08905 711 aa2.21□□□□□ -2.06
SMD1YGR074W YPL272CQ08984 517 aa2.21□□□□□ -2.06
SMD1YGR074W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
SMD1YGR074W BRR1Q99177 341 aaPredicted RBP2.21□□□□□ -2.06
SMD1YGR074W PUT2P07275 575 aa2.2□□□□□ -2.06
SMD1YGR074W MRP13P12686 339 aa2.2□□□□□ -2.06
SMD1YGR074W RPL3P14126 387 aaKnown RBP2.2□□□□□ -2.06
SMD1YGR074W YAP1P19880 650 aaKnown RBP2.2□□□□□ -2.06
SMD1YGR074W BUD5P25300 642 aaPredicted RBP2.2□□□□□ -2.06
SMD1YGR074W STE50P25344 346 aa2.2□□□□□ -2.06
SMD1YGR074W PRD1P25375 712 aa2.2□□□□□ -2.06
SMD1YGR074W GAC1P28006 793 aa2.2□□□□□ -2.06
SMD1YGR074W TFB1P32776 642 aa2.2□□□□□ -2.06
SMD1YGR074W WBP1P33767 430 aaKnown RBP2.2□□□□□ -2.06
SMD1YGR074W HCS1P34243 683 aa2.2□□□□□ -2.06
SMD1YGR074W BLI1P35727 113 aa2.2□□□□□ -2.06
SMD1YGR074W YNK1P36010 153 aaKnown RBP2.2□□□□□ -2.06
SMD1YGR074W NUP133P36161 1157 aa2.2□□□□□ -2.06
SMD1YGR074W FLO5P38894 1075 aa2.2□□□□□ -2.06
SMD1YGR074W YJL068CP40363 299 aa2.2□□□□□ -2.06
SMD1YGR074W ULP2P40537 1034 aaPredicted RBP2.2□□□□□ -2.06
SMD1YGR074W CFD1P40558 293 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms