RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	SKN7	P38889	622 aa		4.13	□□□□□ -1.75
TPA1	YER049W	PEX7	P39108	375 aa		4.13	□□□□□ -1.75
TPA1	YER049W	FAA2	P39518	744 aa		4.13	□□□□□ -1.75
TPA1	YER049W	MEF2	P39677	819 aa		4.13	□□□□□ -1.75
TPA1	YER049W	SEC28	P40509	296 aa	Known RBP	4.13	□□□□□ -1.75
TPA1	YER049W	YJL132W	P47014	750 aa		4.13	□□□□□ -1.75
TPA1	YER049W	YGR283C	P53336	341 aa	Predicted RBP	4.13	□□□□□ -1.75
TPA1	YER049W	SKI8	Q02793	397 aa	Predicted RBP	4.13	□□□□□ -1.75
TPA1	YER049W	RSC58	Q07979	502 aa		4.13	□□□□□ -1.75
TPA1	YER049W	NRT1	Q08485	598 aa		4.13	□□□□□ -1.75
TPA1	YER049W	VPS54	Q12071	889 aa		4.13	□□□□□ -1.75
TPA1	YER049W	HOS1	Q12214	470 aa		4.13	□□□□□ -1.75
TPA1	YER049W	NTO1	Q12311	748 aa		4.13	□□□□□ -1.75
TPA1	YER049W	RPL4A	P10664	362 aa	Known RBP	4.12	□□□□□ -1.75
TPA1	YER049W	SAT4	P25333	603 aa	Known RBP	4.12	□□□□□ -1.75
TPA1	YER049W	RPS5	P26783	225 aa	Known RBP	4.12	□□□□□ -1.75
TPA1	YER049W	ATP7	P30902	174 aa		4.12	□□□□□ -1.75
TPA1	YER049W	RPN2	P32565	945 aa	Known RBP	4.12	□□□□□ -1.75
TPA1	YER049W	SPC29	P33419	253 aa		4.12	□□□□□ -1.75
TPA1	YER049W	OCT1	P35999	772 aa		4.12	□□□□□ -1.75
TPA1	YER049W	YHR054C	P38780	354 aa		4.12	□□□□□ -1.75
TPA1	YER049W	YHB1	P39676	399 aa	Known RBP	4.12	□□□□□ -1.75
TPA1	YER049W	YAT2	P40017	923 aa		4.12	□□□□□ -1.75
TPA1	YER049W	DSE1	P40077	573 aa		4.12	□□□□□ -1.75
TPA1	YER049W	RRT5	P43607	289 aa		4.12	□□□□□ -1.75
TPA1	YER049W	TY4A-J	P47023	414 aa		4.12	□□□□□ -1.75
TPA1	YER049W	RPL4B	P49626	362 aa	Known RBP	4.12	□□□□□ -1.75
TPA1	YER049W	MRK1	P50873	501 aa		4.12	□□□□□ -1.75
TPA1	YER049W	SFB2	P53953	876 aa		4.12	□□□□□ -1.75
TPA1	YER049W	SED5	Q01590	340 aa		4.12	□□□□□ -1.75
TPA1	YER049W	MZM1	Q03429	123 aa	Predicted RBP	4.12	□□□□□ -1.75
TPA1	YER049W	ERB1	Q04660	807 aa	Known RBP	4.12	□□□□□ -1.75
TPA1	YER049W	YMR226C	Q05016	267 aa	Known RBP	4.12	□□□□□ -1.75
TPA1	YER049W	YLR455W	Q06188	304 aa		4.12	□□□□□ -1.75
TPA1	YER049W	YOL019W	Q08157	551 aa		4.12	□□□□□ -1.75
TPA1	YER049W	YPR027C	Q12079	277 aa		4.12	□□□□□ -1.75
TPA1	YER049W	LDB17	Q12342	491 aa		4.12	□□□□□ -1.75
TPA1	YER049W	DBP10	Q12389	995 aa	Known RBP	4.12	□□□□□ -1.75
TPA1	YER049W	CHS1	P08004	1131 aa		4.11	□□□□□ -1.75
TPA1	YER049W	SPE1	P08432	466 aa		4.11	□□□□□ -1.75
TPA1	YER049W	HSF1	P10961	833 aa		4.11	□□□□□ -1.75
TPA1	YER049W	KSS1	P14681	368 aa		4.11	□□□□□ -1.75
TPA1	YER049W	URE2	P23202	354 aa	Known RBP	4.11	□□□□□ -1.75
TPA1	YER049W	SPB1	P25582	841 aa	Predicted RBP	4.11	□□□□□ -1.75
TPA1	YER049W	PTP2	P29461	750 aa		4.11	□□□□□ -1.75
TPA1	YER049W	CSE1	P33307	960 aa		4.11	□□□□□ -1.75
TPA1	YER049W	REC104	P33323	182 aa		4.11	□□□□□ -1.75
TPA1	YER049W	PEX5	P35056	612 aa		4.11	□□□□□ -1.75
TPA1	YER049W	TPO5	P36029	618 aa		4.11	□□□□□ -1.75
TPA1	YER049W	YBR241C	P38142	488 aa		4.11	□□□□□ -1.75
TPA1	YER049W	EXO84	P38261	753 aa		4.11	□□□□□ -1.75
TPA1	YER049W	YBR138C	P38277	524 aa		4.11	□□□□□ -1.75
TPA1	YER049W	PCF11	P39081	626 aa	Predicted RBP	4.11	□□□□□ -1.75
TPA1	YER049W	DSS1	P39112	969 aa		4.11	□□□□□ -1.75
TPA1	YER049W	AVT2	P39981	480 aa		4.11	□□□□□ -1.75
TPA1	YER049W	ECM10	P39987	644 aa		4.11	□□□□□ -1.75
TPA1	YER049W	VAB2	P40003	282 aa		4.11	□□□□□ -1.75
TPA1	YER049W	RPT2	P40327	437 aa	Known RBP	4.11	□□□□□ -1.75
TPA1	YER049W	RIC1	P40395	1056 aa		4.11	□□□□□ -1.75
TPA1	YER049W	YRB1	P41920	201 aa	Known RBP	4.11	□□□□□ -1.75
TPA1	YER049W	IRC5	P43610	853 aa		4.11	□□□□□ -1.75
TPA1	YER049W	YJR054W	P47114	497 aa		4.11	□□□□□ -1.75
TPA1	YER049W	IMA1	P53051	589 aa		4.11	□□□□□ -1.75
TPA1	YER049W	ARC35	P53731	342 aa	Known RBP	4.11	□□□□□ -1.75
TPA1	YER049W	SLM2	P53955	656 aa		4.11	□□□□□ -1.75
TPA1	YER049W	SLG1	P54867	378 aa		4.11	□□□□□ -1.75
TPA1	YER049W	YMR155W	Q03795	547 aa		4.11	□□□□□ -1.75
TPA1	YER049W	GPI17	Q04080	534 aa		4.11	□□□□□ -1.75
TPA1	YER049W	HSP31	Q04432	237 aa		4.11	□□□□□ -1.75
TPA1	YER049W	MCM21	Q06675	368 aa		4.11	□□□□□ -1.75
TPA1	YER049W	XYL2	Q07993	356 aa		4.11	□□□□□ -1.75
TPA1	YER049W	THI20	Q08224	551 aa		4.11	□□□□□ -1.75
TPA1	YER049W	SLD7	Q08457	257 aa		4.11	□□□□□ -1.75
TPA1	YER049W	RPN8	Q08723	338 aa	Known RBP	4.11	□□□□□ -1.75
TPA1	YER049W	ENV7	Q12003	364 aa		4.11	□□□□□ -1.75
TPA1	YER049W	HFI1	Q12060	488 aa		4.11	□□□□□ -1.75
TPA1	YER049W	NSL1	Q12143	216 aa		4.11	□□□□□ -1.75
TPA1	YER049W	YLR122C	Q12312	125 aa		4.11	□□□□□ -1.75
TPA1	YER049W	PSY3	Q12318	242 aa		4.11	□□□□□ -1.75
TPA1	YER049W	ZPS1	Q12512	249 aa		4.11	□□□□□ -1.75
TPA1	YER049W	VCX1	Q99385	411 aa		4.11	□□□□□ -1.75
TPA1	YER049W	COX4	P04037	155 aa		4.11	□□□□□ -1.75
TPA1	YER049W	MSS18	P08593	268 aa		4.11	□□□□□ -1.75
TPA1	YER049W	FAR1	P21268	830 aa		4.11	□□□□□ -1.75
TPA1	YER049W	YCL068C	P25593	260 aa		4.11	□□□□□ -1.75
TPA1	YER049W	POL4	P25615	582 aa		4.11	□□□□□ -1.75
TPA1	YER049W	PHO91	P27514	894 aa		4.11	□□□□□ -1.75
TPA1	YER049W	RPC82	P32349	654 aa		4.11	□□□□□ -1.75
TPA1	YER049W	GDA1	P32621	518 aa		4.11	□□□□□ -1.75
TPA1	YER049W	UGP1	P32861	499 aa	Known RBP	4.11	□□□□□ -1.75
TPA1	YER049W	KDX1	P36005	433 aa		4.11	□□□□□ -1.75
TPA1	YER049W	NTR2	P36118	322 aa	Predicted RBP	4.11	□□□□□ -1.75
TPA1	YER049W	YBR238C	P38330	731 aa	Known RBP	4.11	□□□□□ -1.75
TPA1	YER049W	YHI9	P38765	294 aa		4.11	□□□□□ -1.75
TPA1	YER049W	PPE1	P38796	400 aa		4.11	□□□□□ -1.75
TPA1	YER049W	YHR182W	P38870	785 aa		4.11	□□□□□ -1.75
TPA1	YER049W	CYC2	P38909	366 aa		4.11	□□□□□ -1.75
TPA1	YER049W	YER158C	P40095	573 aa		4.11	□□□□□ -1.75
TPA1	YER049W	DIA3	P52290	468 aa		4.11	□□□□□ -1.75
TPA1	YER049W	NOP19	P53317	196 aa	Predicted RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms