RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN3	YER021W	GND1	P38720	489 aa	Known RBP	3.19	□□□□□ -1.9
RPN3	YER021W	SPL2	P38839	148 aa		3.19	□□□□□ -1.9
RPN3	YER021W	SPC97	P38863	823 aa		3.19	□□□□□ -1.9
RPN3	YER021W	SEC31	P38968	1273 aa	Known RBP	3.19	□□□□□ -1.9
RPN3	YER021W	MRX1	P40050	688 aa		3.19	□□□□□ -1.9
RPN3	YER021W	KAP123	P40069	1113 aa	Known RBP	3.19	□□□□□ -1.9
RPN3	YER021W	YNL144C	P53907	740 aa		3.19	□□□□□ -1.9
RPN3	YER021W	MPS1	P54199	764 aa		3.19	□□□□□ -1.9
RPN3	YER021W	SEC5	P89102	971 aa		3.19	□□□□□ -1.9
RPN3	YER021W	FCP1	Q03254	732 aa		3.19	□□□□□ -1.9
RPN3	YER021W	RSM28	Q03430	361 aa		3.19	□□□□□ -1.9
RPN3	YER021W	MRPL1	Q04599	285 aa		3.19	□□□□□ -1.9
RPN3	YER021W	CIR2	Q08822	631 aa		3.19	□□□□□ -1.9
RPN3	YER021W	ATX2	Q12067	313 aa		3.19	□□□□□ -1.9
RPN3	YER021W	CFT2	Q12102	859 aa	Predicted RBP	3.19	□□□□□ -1.9
RPN3	YER021W	YLR049C	Q12110	428 aa		3.19	□□□□□ -1.9
RPN3	YER021W	YOR019W	Q99248	730 aa		3.19	□□□□□ -1.9
RPN3	YER021W	CBF2	P32504	956 aa		3.18	□□□□□ -1.9
RPN3	YER021W	RRN3	P36070	627 aa		3.18	□□□□□ -1.9
RPN3	YER021W	ECM10	P39987	644 aa		3.18	□□□□□ -1.9
RPN3	YER021W	FMP10	P40098	244 aa		3.18	□□□□□ -1.9
RPN3	YER021W	CTK2	P46962	323 aa		3.18	□□□□□ -1.9
RPN3	YER021W	YPL068C	Q02749	293 aa		3.18	□□□□□ -1.9
RPN3	YER021W	SNO4	Q04902	237 aa		3.18	□□□□□ -1.9
RPN3	YER021W	HSP33	Q08914	237 aa	Known RBP	3.18	□□□□□ -1.9
RPN3	YER021W	HSP32	Q08992	237 aa		3.18	□□□□□ -1.9
RPN3	YER021W	YOL087C	Q99247	1116 aa		3.18	□□□□□ -1.9
RPN3	YER021W	STE50	P25344	346 aa		3.17	□□□□□ -1.9
RPN3	YER021W	MRP20	P32387	263 aa		3.17	□□□□□ -1.9
RPN3	YER021W	SCO2	P38072	301 aa		3.17	□□□□□ -1.9
RPN3	YER021W	VAB2	P40003	282 aa		3.17	□□□□□ -1.9
RPN3	YER021W	LYS14	P40971	790 aa		3.17	□□□□□ -1.9
RPN3	YER021W	YFR020W	P43600	232 aa		3.17	□□□□□ -1.9
RPN3	YER021W	LYS20	P48570	428 aa	Known RBP	3.17	□□□□□ -1.9
RPN3	YER021W	UBP8	P50102	471 aa		3.17	□□□□□ -1.9
RPN3	YER021W	ASI1	P54074	624 aa		3.17	□□□□□ -1.9
RPN3	YER021W	PFA5	Q03289	374 aa		3.17	□□□□□ -1.9
RPN3	YER021W	CAC2	Q04199	468 aa		3.17	□□□□□ -1.9
RPN3	YER021W	SWF1	Q04629	336 aa		3.17	□□□□□ -1.9
RPN3	YER021W	RCO1	Q04779	684 aa		3.17	□□□□□ -1.9
RPN3	YER021W	NEW1	Q08972	1196 aa	Known RBP	3.17	□□□□□ -1.9
RPN3	YER021W	DAP1	Q12091	152 aa		3.17	□□□□□ -1.9
RPN3	YER021W	TKL1	P23254	680 aa	Known RBP	3.17	□□□□□ -1.9
RPN3	YER021W	KEL1	P38853	1164 aa	Known RBP	3.17	□□□□□ -1.9
RPN3	YER021W	AFG3	P39925	761 aa		3.17	□□□□□ -1.9
RPN3	YER021W	MDV1	P47025	714 aa		3.17	□□□□□ -1.9
RPN3	YER021W	VID30	P53076	958 aa		3.17	□□□□□ -1.9
RPN3	YER021W	IRC4	Q03036	179 aa		3.17	□□□□□ -1.9
RPN3	YER021W	NUS1	Q12063	375 aa		3.17	□□□□□ -1.9
RPN3	YER021W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
RPN3	YER021W	DPB3	P27344	201 aa		3.16	□□□□□ -1.9
RPN3	YER021W	SEC24	P40482	926 aa	Known RBP	3.16	□□□□□ -1.9
RPN3	YER021W	YIR016W	P40572	265 aa		3.16	□□□□□ -1.9
RPN3	YER021W	IME4	P41833	600 aa		3.16	□□□□□ -1.9
RPN3	YER021W	VPS25	P47142	202 aa		3.16	□□□□□ -1.9
RPN3	YER021W	PIL1	P53252	339 aa	Known RBP	3.16	□□□□□ -1.9
RPN3	YER021W	MUB1	Q03162	620 aa		3.16	□□□□□ -1.9
RPN3	YER021W	GSH2	Q08220	491 aa		3.16	□□□□□ -1.9
RPN3	YER021W	YLR112W	Q12130	139 aa		3.16	□□□□□ -1.9
RPN3	YER021W	SAC3	P46674	1301 aa		3.15	□□□□□ -1.9
RPN3	YER021W	RPL42A	P0CX27	106 aa	Known RBP	3.15	□□□□□ -1.91
RPN3	YER021W	RPL42B	P0CX28	106 aa	Known RBP	3.15	□□□□□ -1.91
RPN3	YER021W	RAP1	P11938	827 aa		3.15	□□□□□ -1.91
RPN3	YER021W	LCB1	P25045	558 aa	Known RBP	3.15	□□□□□ -1.91
RPN3	YER021W	RER1	P25560	188 aa		3.15	□□□□□ -1.91
RPN3	YER021W	CDC15	P27636	974 aa		3.15	□□□□□ -1.91
RPN3	YER021W	ALY1	P36117	915 aa		3.15	□□□□□ -1.91
RPN3	YER021W	LEU5	P38702	357 aa		3.15	□□□□□ -1.91
RPN3	YER021W	SLZ1	P40167	298 aa		3.15	□□□□□ -1.91
RPN3	YER021W	DPH1	P40487	425 aa	Known RBP	3.15	□□□□□ -1.91
RPN3	YER021W	IRC8	P47046	822 aa		3.15	□□□□□ -1.91
RPN3	YER021W	YTP1	P53584	459 aa		3.15	□□□□□ -1.91
RPN3	YER021W	CBK1	P53894	756 aa		3.15	□□□□□ -1.91
RPN3	YER021W	INN1	P53901	409 aa		3.15	□□□□□ -1.91
RPN3	YER021W	YOL159C	Q08300	171 aa		3.15	□□□□□ -1.91
RPN3	YER021W	ATG9	Q12142	997 aa		3.15	□□□□□ -1.91
RPN3	YER021W	NUM1	Q00402	2748 aa		3.15	□□□□□ -1.91
RPN3	YER021W	FAB1	P34756	2278 aa		3.14	□□□□□ -1.91
RPN3	YER021W	CLB2	P24869	491 aa		3.14	□□□□□ -1.91
RPN3	YER021W	SAC1	P32368	623 aa	Known RBP	3.14	□□□□□ -1.91
RPN3	YER021W	ATO2	P32907	282 aa		3.14	□□□□□ -1.91
RPN3	YER021W	YIL152W	P40455	235 aa		3.14	□□□□□ -1.91
RPN3	YER021W	SIP4	P46954	829 aa		3.14	□□□□□ -1.91
RPN3	YER021W	MEP3	P53390	489 aa		3.14	□□□□□ -1.91
RPN3	YER021W	IZH1	Q03419	316 aa		3.14	□□□□□ -1.91
RPN3	YER021W	POS5	Q06892	414 aa		3.14	□□□□□ -1.91
RPN3	YER021W	UBX3	Q12229	455 aa		3.14	□□□□□ -1.91
RPN3	YER021W	SWI1	P09547	1314 aa		3.14	□□□□□ -1.91
RPN3	YER021W	YBR085C-A	O43137	85 aa		3.13	□□□□□ -1.91
RPN3	YER021W	HXK2	P04807	486 aa	Known RBP	3.13	□□□□□ -1.91
RPN3	YER021W	SSH4	P32343	579 aa		3.13	□□□□□ -1.91
RPN3	YER021W	YJR061W	P40355	935 aa		3.13	□□□□□ -1.91
RPN3	YER021W	PKP1	P40530	394 aa		3.13	□□□□□ -1.91
RPN3	YER021W	IST1	P53843	298 aa	Predicted RBP	3.13	□□□□□ -1.91
RPN3	YER021W	YNL050C	P53952	270 aa		3.13	□□□□□ -1.91
RPN3	YER021W	INA17	Q02888	182 aa		3.13	□□□□□ -1.91
RPN3	YER021W	MLH2	Q07980	695 aa		3.13	□□□□□ -1.91
RPN3	YER021W	DSE3	Q08729	430 aa		3.13	□□□□□ -1.91
RPN3	YER021W	SUP35	P05453	685 aa	Known RBP	3.12	□□□□□ -1.91
RPN3	YER021W	FUM1	P08417	488 aa	Known RBP	3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms