RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C NPL6P32832 435 aa3.44□□□□□ -1.86
CDC40YDR364C SHP1P34223 423 aa3.44□□□□□ -1.86
CDC40YDR364C EBP2P36049 427 aaKnown RBP3.44□□□□□ -1.86
CDC40YDR364C GMH1P36125 273 aa3.44□□□□□ -1.86
CDC40YDR364C CDS1P38221 457 aa3.44□□□□□ -1.86
CDC40YDR364C SPT8P38915 602 aa3.44□□□□□ -1.86
CDC40YDR364C CAJ1P39101 391 aa3.44□□□□□ -1.86
CDC40YDR364C FTR1P40088 404 aa3.44□□□□□ -1.86
CDC40YDR364C JEM1P40358 645 aa3.44□□□□□ -1.86
CDC40YDR364C YIL089WP40500 205 aa3.44□□□□□ -1.86
CDC40YDR364C TFG2P41896 400 aaPredicted RBP3.44□□□□□ -1.86
CDC40YDR364C SIP4P46954 829 aa3.44□□□□□ -1.86
CDC40YDR364C MRX6P48564 524 aa3.44□□□□□ -1.86
CDC40YDR364C VPS75P53853 264 aa3.44□□□□□ -1.86
CDC40YDR364C PGA2P53903 129 aa3.44□□□□□ -1.86
CDC40YDR364C TY2A-DR2Q03483 438 aa3.44□□□□□ -1.86
CDC40YDR364C SPH1Q06160 661 aa3.44□□□□□ -1.86
CDC40YDR364C YPL216WQ08964 1102 aa3.44□□□□□ -1.86
CDC40YDR364C RCN2Q12044 265 aa3.44□□□□□ -1.86
CDC40YDR364C TY2A-BQ12260 438 aa3.44□□□□□ -1.86
CDC40YDR364C TY2A-OR2Q12293 438 aa3.44□□□□□ -1.86
CDC40YDR364C SUL2Q12325 893 aa3.44□□□□□ -1.86
CDC40YDR364C TY2A-DR1Q12392 438 aa3.44□□□□□ -1.86
CDC40YDR364C TY2A-OR1Q12439 438 aa3.44□□□□□ -1.86
CDC40YDR364C RTN2Q12443 393 aa3.44□□□□□ -1.86
CDC40YDR364C ERG27Q12452 347 aaKnown RBP3.44□□□□□ -1.86
CDC40YDR364C ARP6Q12509 438 aa3.44□□□□□ -1.86
CDC40YDR364C TY2A-DR3Q99303 438 aa3.44□□□□□ -1.86
CDC40YDR364C NAT1P12945 854 aaKnown RBP3.43□□□□□ -1.86
CDC40YDR364C VMA2P16140 517 aaKnown RBP3.43□□□□□ -1.86
CDC40YDR364C NUP1P20676 1076 aa3.43□□□□□ -1.86
CDC40YDR364C PSO2P30620 661 aa3.43□□□□□ -1.86
CDC40YDR364C PRE2P30656 287 aaKnown RBP3.43□□□□□ -1.86
CDC40YDR364C ERG3P32353 365 aa3.43□□□□□ -1.86
CDC40YDR364C DPH2P32461 534 aa3.43□□□□□ -1.86
CDC40YDR364C SIP3P38717 1229 aa3.43□□□□□ -1.86
CDC40YDR364C PIH1P38768 344 aa3.43□□□□□ -1.86
CDC40YDR364C LRP1P38801 184 aaKnown RBP3.43□□□□□ -1.86
CDC40YDR364C UTP9P38882 575 aaKnown RBP3.43□□□□□ -1.86
CDC40YDR364C YJL068CP40363 299 aa3.43□□□□□ -1.86
CDC40YDR364C YIL077CP40508 320 aa3.43□□□□□ -1.86
CDC40YDR364C THI6P41835 540 aa3.43□□□□□ -1.86
CDC40YDR364C MEP2P41948 499 aa3.43□□□□□ -1.86
CDC40YDR364C IDS2P46958 469 aa3.43□□□□□ -1.86
CDC40YDR364C YDL183CP48569 320 aa3.43□□□□□ -1.86
CDC40YDR364C YPL068CQ02749 293 aa3.43□□□□□ -1.86
CDC40YDR364C HMO1Q03973 246 aaKnown RBP3.43□□□□□ -1.86
CDC40YDR364C STP3Q05937 343 aa3.43□□□□□ -1.86
CDC40YDR364C PSR1Q07800 427 aa3.43□□□□□ -1.86
CDC40YDR364C NUS1Q12063 375 aa3.43□□□□□ -1.86
CDC40YDR364C TY1B-AO13527 1196 aaKnown RBP3.42□□□□□ -1.86
CDC40YDR364C CBS1P14066 229 aa3.42□□□□□ -1.86
CDC40YDR364C ISY1P21374 235 aaPredicted RBP3.42□□□□□ -1.86
CDC40YDR364C APN1P22936 367 aa3.42□□□□□ -1.86
CDC40YDR364C ERG8P24521 451 aa3.42□□□□□ -1.86
CDC40YDR364C MNE1P24720 663 aa3.42□□□□□ -1.86
CDC40YDR364C OCA4P25366 362 aa3.42□□□□□ -1.86
CDC40YDR364C SPC110P32380 944 aa3.42□□□□□ -1.86
CDC40YDR364C YPT7P32939 208 aa3.42□□□□□ -1.86
CDC40YDR364C RPC25P35718 212 aa3.42□□□□□ -1.86
CDC40YDR364C YET1P35723 206 aa3.42□□□□□ -1.86
CDC40YDR364C MCR1P36060 302 aaKnown RBP3.42□□□□□ -1.86
CDC40YDR364C ALY1P36117 915 aa3.42□□□□□ -1.86
CDC40YDR364C REG2P38232 338 aa3.42□□□□□ -1.86
CDC40YDR364C COS111P38308 924 aa3.42□□□□□ -1.86
CDC40YDR364C PSD1P39006 500 aa3.42□□□□□ -1.86
CDC40YDR364C GET2P40056 285 aa3.42□□□□□ -1.86
CDC40YDR364C LSM5P40089 93 aaKnown RBP3.42□□□□□ -1.86
CDC40YDR364C PFK26P40433 827 aaKnown RBP3.42□□□□□ -1.86
CDC40YDR364C TOS3P43637 560 aa3.42□□□□□ -1.86
CDC40YDR364C AIP1P46680 615 aaKnown RBP3.42□□□□□ -1.86
CDC40YDR364C FYV8P46949 817 aaKnown RBP3.42□□□□□ -1.86
CDC40YDR364C DIP5P53388 608 aa3.42□□□□□ -1.86
CDC40YDR364C NGL3Q03210 505 aa3.42□□□□□ -1.86
CDC40YDR364C EBS1Q03466 884 aaKnown RBP3.42□□□□□ -1.86
CDC40YDR364C RCO1Q04779 684 aa3.42□□□□□ -1.86
CDC40YDR364C FUS2Q05670 677 aa3.42□□□□□ -1.86
CDC40YDR364C AIM6Q07716 390 aa3.42□□□□□ -1.86
CDC40YDR364C NOP58Q12499 511 aaKnown RBP3.42□□□□□ -1.86
CDC40YDR364C PNO1Q99216 274 aaKnown RBP3.42□□□□□ -1.86
CDC40YDR364C HRP1Q99383 534 aaKnown RBP3.42□□□□□ -1.86
CDC40YDR364C RPB2P08518 1224 aaKnown RBP3.41□□□□□ -1.86
CDC40YDR364C TCP1P12612 559 aaKnown RBP3.41□□□□□ -1.86
CDC40YDR364C CLN3P13365 580 aa3.41□□□□□ -1.86
CDC40YDR364C PMS1P14242 873 aa3.41□□□□□ -1.86
CDC40YDR364C THR1P17423 357 aaKnown RBP3.41□□□□□ -1.86
CDC40YDR364C PHO13P19881 312 aa3.41□□□□□ -1.86
CDC40YDR364C SRO77P38163 1010 aa3.41□□□□□ -1.86
CDC40YDR364C YJL193WP39542 402 aa3.41□□□□□ -1.86
CDC40YDR364C ARB1P40024 610 aaKnown RBP3.41□□□□□ -1.86
CDC40YDR364C TMN3P40071 706 aa3.41□□□□□ -1.86
CDC40YDR364C FMP10P40098 244 aa3.41□□□□□ -1.86
CDC40YDR364C YIL161WP40449 235 aaKnown RBP3.41□□□□□ -1.86
CDC40YDR364C YGL039WP53183 348 aaKnown RBP3.41□□□□□ -1.86
CDC40YDR364C TAM41P53230 385 aa3.41□□□□□ -1.86
CDC40YDR364C ZPR1P53303 486 aaKnown RBP3.41□□□□□ -1.86
CDC40YDR364C YGR250CP53316 781 aaKnown RBP3.41□□□□□ -1.86
CDC40YDR364C OGG1P53397 376 aaPredicted RBP3.41□□□□□ -1.86
CDC40YDR364C YDR286CQ05530 114 aa3.41□□□□□ -1.86
CDC40YDR364C VAM6Q07468 1049 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 74.3 ms