RNA–Protein interactions for RNA: YCR073C

SSK22, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK22, Length 3,996 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK22YCR073C YDL109CQ12103 647 aa5.66□□□□□ -1.5
SSK22YCR073C DCP1Q12517 231 aaPredicted RBP5.66□□□□□ -1.5
SSK22YCR073C SWI5P08153 709 aa5.65□□□□□ -1.5
SSK22YCR073C CCA1P21269 546 aa5.65□□□□□ -1.5
SSK22YCR073C TAH1P25638 111 aaPredicted RBP5.65□□□□□ -1.5
SSK22YCR073C HIR2P32480 875 aa5.65□□□□□ -1.5
SSK22YCR073C HSP78P33416 811 aa5.65□□□□□ -1.5
SSK22YCR073C GUA1P38625 525 aaKnown RBP5.65□□□□□ -1.5
SSK22YCR073C YHR020WP38708 688 aaKnown RBP5.65□□□□□ -1.5
SSK22YCR073C YJL132WP47014 750 aa5.65□□□□□ -1.5
SSK22YCR073C SNF12P53628 566 aa5.65□□□□□ -1.5
SSK22YCR073C MRPS16Q02608 121 aa5.65□□□□□ -1.5
SSK22YCR073C MRPL35Q06678 367 aa5.65□□□□□ -1.5
SSK22YCR073C VPS36Q06696 566 aa5.65□□□□□ -1.5
SSK22YCR073C MET16P18408 261 aaPredicted RBP5.65□□□□□ -1.5
SSK22YCR073C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
SSK22YCR073C MTW1P39731 289 aa5.65□□□□□ -1.5
SSK22YCR073C MRPL13Q02204 264 aa5.65□□□□□ -1.5
SSK22YCR073C YDR124WQ04608 324 aa5.65□□□□□ -1.5
SSK22YCR073C YDL121CQ07541 149 aa5.65□□□□□ -1.5
SSK22YCR073C DPH2P32461 534 aa5.65□□□□□ -1.51
SSK22YCR073C YHR182WP38870 785 aa5.65□□□□□ -1.51
SSK22YCR073C LYS9P38999 446 aa5.65□□□□□ -1.51
SSK22YCR073C FMP48P53233 369 aa5.65□□□□□ -1.51
SSK22YCR073C YML037CQ03703 340 aa5.65□□□□□ -1.51
SSK22YCR073C MET17P06106 444 aa5.65□□□□□ -1.51
SSK22YCR073C VBA3P25594 458 aa5.65□□□□□ -1.51
SSK22YCR073C UBC8P28263 218 aa5.65□□□□□ -1.51
SSK22YCR073C VBA5P36172 582 aa5.65□□□□□ -1.51
SSK22YCR073C AGP2P38090 596 aa5.65□□□□□ -1.51
SSK22YCR073C SDH8P38345 138 aa5.65□□□□□ -1.51
SSK22YCR073C TPA1P40032 644 aaKnown RBP5.65□□□□□ -1.51
SSK22YCR073C TIS11P47977 285 aa5.65□□□□□ -1.51
SSK22YCR073C BIO3P50277 480 aa5.65□□□□□ -1.51
SSK22YCR073C YGR283CP53336 341 aaPredicted RBP5.65□□□□□ -1.51
SSK22YCR073C DOT1Q04089 582 aaKnown RBP5.65□□□□□ -1.51
SSK22YCR073C CDD1Q06549 142 aa5.65□□□□□ -1.51
SSK22YCR073C GSH2Q08220 491 aa5.65□□□□□ -1.51
SSK22YCR073C MRH1Q12117 320 aaPredicted RBP5.65□□□□□ -1.51
SSK22YCR073C YRR1Q12172 810 aa5.65□□□□□ -1.51
SSK22YCR073C HSP42Q12329 375 aa5.65□□□□□ -1.51
SSK22YCR073C PFK27Q12471 397 aaPredicted RBP5.65□□□□□ -1.51
SSK22YCR073C VPS5Q92331 675 aa5.65□□□□□ -1.51
SSK22YCR073C SPT3P06844 337 aa5.64□□□□□ -1.51
SSK22YCR073C KGD2P19262 463 aaPredicted RBP5.64□□□□□ -1.51
SSK22YCR073C ATP12P22135 325 aa5.64□□□□□ -1.51
SSK22YCR073C NDI1P32340 513 aa5.64□□□□□ -1.51
SSK22YCR073C STB5P38699 743 aa5.64□□□□□ -1.51
SSK22YCR073C YNL010WP53981 241 aaKnown RBP5.64□□□□□ -1.51
SSK22YCR073C MUS81Q04149 632 aaPredicted RBP5.64□□□□□ -1.51
SSK22YCR073C YLR345WQ06137 509 aa5.64□□□□□ -1.51
SSK22YCR073C GPM2Q12008 311 aa5.64□□□□□ -1.51
SSK22YCR073C YLR125WQ12138 136 aa5.64□□□□□ -1.51
SSK22YCR073C YOR012WQ12351 137 aa5.64□□□□□ -1.51
SSK22YCR073C GAL10P04397 699 aa5.64□□□□□ -1.51
SSK22YCR073C PMA1P05030 918 aaKnown RBP5.64□□□□□ -1.51
SSK22YCR073C FBP1P09201 348 aa5.64□□□□□ -1.51
SSK22YCR073C MNN9P39107 395 aaKnown RBP5.64□□□□□ -1.51
SSK22YCR073C POP1P41812 875 aa5.64□□□□□ -1.51
SSK22YCR073C COG1P53079 417 aa5.64□□□□□ -1.51
SSK22YCR073C VAC7P53950 1165 aa5.64□□□□□ -1.51
SSK22YCR073C RMI1Q02685 241 aa5.64□□□□□ -1.51
SSK22YCR073C TSR2Q06672 205 aaKnown RBP5.64□□□□□ -1.51
SSK22YCR073C SYT1Q06836 1226 aa5.64□□□□□ -1.51
SSK22YCR073C ESC8Q08119 714 aa5.64□□□□□ -1.51
SSK22YCR073C HFI1Q12060 488 aa5.64□□□□□ -1.51
SSK22YCR073C RRG1Q12167 365 aaPredicted RBP5.64□□□□□ -1.51
SSK22YCR073C YCK2P23292 546 aaKnown RBP5.64□□□□□ -1.51
SSK22YCR073C PCS60P38137 543 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
SSK22YCR073C VPS29P38759 282 aa5.64□□□□□ -1.51
SSK22YCR073C VRG4P40107 337 aa5.64□□□□□ -1.51
SSK22YCR073C YGR168CP53293 376 aa5.64□□□□□ -1.51
SSK22YCR073C CSN9Q03981 162 aa5.64□□□□□ -1.51
SSK22YCR073C MCA1Q08601 432 aa5.64□□□□□ -1.51
SSK22YCR073C NSI1Q12457 570 aa5.64□□□□□ -1.51
SSK22YCR073C SKG6P32900 734 aaPredicted RBP5.63□□□□□ -1.51
SSK22YCR073C TAF14P35189 244 aa5.63□□□□□ -1.51
SSK22YCR073C MAC1P35192 417 aa5.63□□□□□ -1.51
SSK22YCR073C YJL181WP46987 611 aa5.63□□□□□ -1.51
SSK22YCR073C SPP2Q02521 185 aa5.63□□□□□ -1.51
SSK22YCR073C RSB1Q08417 382 aa5.63□□□□□ -1.51
SSK22YCR073C BRR1Q99177 341 aaPredicted RBP5.63□□□□□ -1.51
SSK22YCR073C DAP2P18962 818 aa5.63□□□□□ -1.51
SSK22YCR073C BUB2P26448 306 aaPredicted RBP5.63□□□□□ -1.51
SSK22YCR073C ARO7P32178 256 aa5.63□□□□□ -1.51
SSK22YCR073C RPC34P32910 317 aa5.63□□□□□ -1.51
SSK22YCR073C CAF4P36130 643 aa5.63□□□□□ -1.51
SSK22YCR073C APD1P38281 316 aa5.63□□□□□ -1.51
SSK22YCR073C QRI7P43122 407 aa5.63□□□□□ -1.51
SSK22YCR073C IRC18P47056 224 aa5.63□□□□□ -1.51
SSK22YCR073C HAM1P47119 197 aaKnown RBP5.63□□□□□ -1.51
SSK22YCR073C TPN1P53099 579 aa5.63□□□□□ -1.51
SSK22YCR073C RAX1Q08760 435 aa5.63□□□□□ -1.51
SSK22YCR073C RTN2Q12443 393 aa5.63□□□□□ -1.51
SSK22YCR073C ZPS1Q12512 249 aa5.63□□□□□ -1.51
SSK22YCR073C AI4P03878 556 aa5.63□□□□□ -1.51
SSK22YCR073C HTA2P04912 132 aa5.63□□□□□ -1.51
SSK22YCR073C PEP7P32609 515 aa5.63□□□□□ -1.51
SSK22YCR073C GND1P38720 489 aaKnown RBP5.63□□□□□ -1.51
SSK22YCR073C ELO3P40319 345 aa5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 107.9 ms