RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	SUT2	Q12286	268 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	BUD5	P25300	642 aa	Predicted RBP	5.11	□□□□□ -1.59
ECM1	YAL059W	NTH1	P32356	751 aa		5.11	□□□□□ -1.59
ECM1	YAL059W	MTC7	P32633	139 aa		5.11	□□□□□ -1.59
ECM1	YAL059W	AUR1	P36107	401 aa	Predicted RBP	5.11	□□□□□ -1.59
ECM1	YAL059W	KSP1	P38691	1029 aa	Known RBP	5.11	□□□□□ -1.59
ECM1	YAL059W	DLD2	P46681	530 aa	Known RBP	5.11	□□□□□ -1.59
ECM1	YAL059W	MLC1	P53141	149 aa		5.11	□□□□□ -1.59
ECM1	YAL059W	RPA49	Q01080	415 aa	Predicted RBP	5.11	□□□□□ -1.59
ECM1	YAL059W	MUB1	Q03162	620 aa		5.11	□□□□□ -1.59
ECM1	YAL059W	YML037C	Q03703	340 aa		5.11	□□□□□ -1.59
ECM1	YAL059W	SOV1	Q04748	898 aa		5.11	□□□□□ -1.59
ECM1	YAL059W	RQC1	Q05468	723 aa	Known RBP	5.11	□□□□□ -1.59
ECM1	YAL059W	YLR413W	Q06689	675 aa		5.11	□□□□□ -1.59
ECM1	YAL059W	BUD7	Q08754	746 aa		5.11	□□□□□ -1.59
ECM1	YAL059W	LEU9	Q12166	604 aa	Known RBP	5.11	□□□□□ -1.59
ECM1	YAL059W	UBX3	Q12229	455 aa		5.11	□□□□□ -1.59
ECM1	YAL059W	YDR061W	Q12298	539 aa		5.11	□□□□□ -1.59
ECM1	YAL059W	ADF1	Q2V2Q1	113 aa		5.11	□□□□□ -1.59
ECM1	YAL059W	YPT6	Q99260	215 aa		5.11	□□□□□ -1.59
ECM1	YAL059W	VCX1	Q99385	411 aa		5.11	□□□□□ -1.59
ECM1	YAL059W	TDH1	P00360	332 aa	Known RBP	5.1	□□□□□ -1.59
ECM1	YAL059W	TPK2	P06245	380 aa		5.1	□□□□□ -1.59
ECM1	YAL059W	ARO3	P14843	370 aa	Known RBP	5.1	□□□□□ -1.59
ECM1	YAL059W	TAL1	P15019	335 aa	Known RBP	5.1	□□□□□ -1.59
ECM1	YAL059W	TUP1	P16649	713 aa		5.1	□□□□□ -1.59
ECM1	YAL059W	VPS3	P23643	1011 aa		5.1	□□□□□ -1.59
ECM1	YAL059W	YJU2	P28320	278 aa	Predicted RBP	5.1	□□□□□ -1.59
ECM1	YAL059W	PRE4	P30657	266 aa		5.1	□□□□□ -1.59
ECM1	YAL059W	DOA4	P32571	926 aa		5.1	□□□□□ -1.59
ECM1	YAL059W	LRO1	P40345	661 aa		5.1	□□□□□ -1.59
ECM1	YAL059W	ASG1	P40467	964 aa		5.1	□□□□□ -1.59
ECM1	YAL059W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
ECM1	YAL059W	VMA13	P41807	478 aa	Known RBP	5.1	□□□□□ -1.59
ECM1	YAL059W	RHO5	P53879	331 aa	Known RBP	5.1	□□□□□ -1.59
ECM1	YAL059W	SMA1	Q02651	245 aa		5.1	□□□□□ -1.59
ECM1	YAL059W	VPS38	Q05919	439 aa		5.1	□□□□□ -1.59
ECM1	YAL059W	SMD2	Q06217	110 aa	Known RBP	5.1	□□□□□ -1.59
ECM1	YAL059W	TY3A-G	Q12173	290 aa		5.1	□□□□□ -1.59
ECM1	YAL059W	RKI1	Q12189	258 aa		5.1	□□□□□ -1.59
ECM1	YAL059W	SPE4	Q12455	300 aa		5.1	□□□□□ -1.59
ECM1	YAL059W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.1	□□□□□ -1.59
ECM1	YAL059W	TY3A-I	Q99219	290 aa		5.1	□□□□□ -1.59
ECM1	YAL059W	CLC1	P17891	233 aa		5.09	□□□□□ -1.59
ECM1	YAL059W	SPS22	P25380	463 aa		5.09	□□□□□ -1.59
ECM1	YAL059W	PMT1	P33775	817 aa		5.09	□□□□□ -1.59
ECM1	YAL059W	CMC1	P36064	111 aa		5.09	□□□□□ -1.59
ECM1	YAL059W	GMH1	P36125	273 aa		5.09	□□□□□ -1.59
ECM1	YAL059W	PEX32	P38292	413 aa		5.09	□□□□□ -1.59
ECM1	YAL059W	CRG1	P38892	291 aa	RIP-Chip data	5.09	□□□□□ -1.59	not detected
ECM1	YAL059W	YJL070C	P40361	888 aa		5.09	□□□□□ -1.59
ECM1	YAL059W	NMA2	P53204	395 aa		5.09	□□□□□ -1.59
ECM1	YAL059W	YGR054W	P53235	642 aa	Known RBP	5.09	□□□□□ -1.59
ECM1	YAL059W	MSC3	Q05812	728 aa		5.09	□□□□□ -1.59
ECM1	YAL059W	ADE13	Q05911	482 aa	Known RBP	5.09	□□□□□ -1.59
ECM1	YAL059W	AIM6	Q07716	390 aa		5.09	□□□□□ -1.59
ECM1	YAL059W	IZH3	Q07959	543 aa		5.09	□□□□□ -1.59
ECM1	YAL059W	RAD61	Q99359	647 aa		5.09	□□□□□ -1.59
ECM1	YAL059W	YLR278C	Q05854	1341 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	GAL80	P04387	435 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	GCD2	P12754	651 aa	Predicted RBP	5.08	□□□□□ -1.6
ECM1	YAL059W	RPL3	P14126	387 aa	Known RBP	5.08	□□□□□ -1.6
ECM1	YAL059W	EFB1	P32471	206 aa	Known RBP	5.08	□□□□□ -1.6
ECM1	YAL059W	EMP70	P32802	667 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	ELF1	P36053	145 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	AFG3	P39925	761 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	TMN3	P40071	706 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	FTR1	P40088	404 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	YTA12	P40341	825 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	MAF1	P41910	395 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	CGR1	P53188	120 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	TAM41	P53230	385 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	YNL144C	P53907	740 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	STP3	Q05937	343 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	TSR1	Q07381	788 aa	Known RBP	5.08	□□□□□ -1.6
ECM1	YAL059W	UAF30	Q08747	228 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	MRPL23	Q12487	163 aa	Predicted RBP	5.08	□□□□□ -1.6
ECM1	YAL059W	NBL1	Q3E7Y6	73 aa		5.08	□□□□□ -1.6
ECM1	YAL059W	LAM4	P38800	1345 aa		5.07	□□□□□ -1.6
ECM1	YAL059W	LPD1	P09624	499 aa	Known RBP	5.07	□□□□□ -1.6
ECM1	YAL059W	MSS116	P15424	664 aa	Known RBP	5.07	□□□□□ -1.6
ECM1	YAL059W	PRP2	P20095	876 aa	Predicted RBP	5.07	□□□□□ -1.6
ECM1	YAL059W	RPL5	P26321	297 aa	Known RBP	5.07	□□□□□ -1.6
ECM1	YAL059W	CRM1	P30822	1084 aa	Known RBP	5.07	□□□□□ -1.6
ECM1	YAL059W	AFG1	P32317	509 aa		5.07	□□□□□ -1.6
ECM1	YAL059W	APL3	P38065	1025 aa		5.07	□□□□□ -1.6
ECM1	YAL059W	SLM4	P38247	162 aa		5.07	□□□□□ -1.6
ECM1	YAL059W	STB5	P38699	743 aa		5.07	□□□□□ -1.6
ECM1	YAL059W	INA22	P40576	216 aa		5.07	□□□□□ -1.6
ECM1	YAL059W	YFR018C	P43599	363 aa		5.07	□□□□□ -1.6
ECM1	YAL059W	PET130	P47065	347 aa		5.07	□□□□□ -1.6
ECM1	YAL059W	TWF1	P53250	332 aa		5.07	□□□□□ -1.6
ECM1	YAL059W	RRP46	P53256	223 aa	Predicted RBP	5.07	□□□□□ -1.6
ECM1	YAL059W	DIP5	P53388	608 aa		5.07	□□□□□ -1.6
ECM1	YAL059W	YNL143C	P53908	130 aa		5.07	□□□□□ -1.6
ECM1	YAL059W	VTA1	Q06263	330 aa		5.07	□□□□□ -1.6
ECM1	YAL059W	RBD2	Q12270	262 aa		5.07	□□□□□ -1.6
ECM1	YAL059W	AVL9	Q12500	764 aa		5.07	□□□□□ -1.6
ECM1	YAL059W	YML133C	Q03099	1374 aa		5.06	□□□□□ -1.6
ECM1	YAL059W	YLL067C	Q07888	1374 aa		5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms