RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH2	YOL090W	MNN2	P38069	597 aa		3.2	□□□□□ -1.9
MSH2	YOL090W	SPT8	P38915	602 aa		3.2	□□□□□ -1.9
MSH2	YOL090W	REV7	P38927	245 aa		3.2	□□□□□ -1.9
MSH2	YOL090W	ZRG8	P40021	1076 aa		3.2	□□□□□ -1.9
MSH2	YOL090W	IME4	P41833	600 aa		3.2	□□□□□ -1.9
MSH2	YOL090W	APT1	P49435	187 aa	Known RBP	3.2	□□□□□ -1.9
MSH2	YOL090W	YGR066C	P53242	292 aa		3.2	□□□□□ -1.9
MSH2	YOL090W	VPS20	Q04272	221 aa		3.2	□□□□□ -1.9
MSH2	YOL090W	ATG38	Q05789	226 aa	Known RBP	3.2	□□□□□ -1.9
MSH2	YOL090W	VPS38	Q05919	439 aa		3.2	□□□□□ -1.9
MSH2	YOL090W	GPN2	Q08726	347 aa	Predicted RBP	3.2	□□□□□ -1.9
MSH2	YOL090W	PRS5	Q12265	496 aa	Known RBP	3.2	□□□□□ -1.9
MSH2	YOL090W	COQ4	O13525	335 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	URK1	P27515	501 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	YKT6	P36015	200 aa	Known RBP	3.19	□□□□□ -1.9
MSH2	YOL090W	PIM1	P36775	1133 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	YHR078W	P38799	552 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	MLH1	P38920	769 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	SDP1	P40479	209 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	YIL089W	P40500	205 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	ELP2	P42935	788 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	DLD2	P46681	530 aa	Known RBP	3.19	□□□□□ -1.9
MSH2	YOL090W	PET130	P47065	347 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	ECM27	P47144	725 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	BPL1	P48445	690 aa	Predicted RBP	3.19	□□□□□ -1.9
MSH2	YOL090W	PRP31	P49704	494 aa	Predicted RBP	3.19	□□□□□ -1.9
MSH2	YOL090W	ASE1	P50275	885 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	YGR012W	P53206	393 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	YNL143C	P53908	130 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	MSC2	Q03455	724 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	YSH1	Q06224	779 aa	Predicted RBP	3.19	□□□□□ -1.9
MSH2	YOL090W	ARR3	Q06598	404 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	WHI4	Q07655	649 aa	Known RBP	3.19	□□□□□ -1.9
MSH2	YOL090W	TRE1	Q08919	783 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	NUS1	Q12063	375 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	SFG1	Q12507	346 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	ARD1	P07347	238 aa	Predicted RBP	3.19	□□□□□ -1.9
MSH2	YOL090W	GAL7	P08431	366 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	RML2	P32611	393 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	SLM4	P38247	162 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	SEC24	P40482	926 aa	Known RBP	3.19	□□□□□ -1.9
MSH2	YOL090W	GTS1	P40956	396 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	CTK2	P46962	323 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	PRY1	P47032	299 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	NCS6	P53088	359 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	DSE4	P53753	1117 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	ARP5	P53946	755 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	CUR1	Q06469	252 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	DIB1	Q06819	143 aa	Predicted RBP	3.19	□□□□□ -1.9
MSH2	YOL090W	SEC39	Q12745	709 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	ADF1	Q2V2Q1	113 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	ECM3	Q99252	613 aa		3.19	□□□□□ -1.9
MSH2	YOL090W	AI3	P03877	415 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	YML003W	P0CF16	290 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	TAL1	P15019	335 aa	Known RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	RNR1	P21524	888 aa	Known RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	COS111	P38308	924 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	ALG5	P40350	334 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	YGL242C	P53066	181 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	YNL050C	P53952	270 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	RCM1	P53972	490 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	YVC1	Q12324	675 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	SNF2	P22082	1703 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	CAR2	P07991	424 aa	Known RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	TUB3	P09734	445 aa	Known RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	RPS4A	P0CX35	261 aa	Known RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	RPS4B	P0CX36	261 aa	Known RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	PUT4	P15380	627 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	FAA1	P30624	700 aa	Known RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	MRE11	P32829	692 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	MRP4	P32902	394 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	KES1	P35844	434 aa	Known RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	TCD2	P36101	447 aa	Known RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	MSS4	P38994	779 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	PEX7	P39108	375 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	NUP60	P39705	539 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	GET2	P40056	285 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	INA22	P40576	216 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	INP52	P50942	1183 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	TWF1	P53250	332 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	SGO1	Q08490	590 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	LYS21	Q12122	440 aa	Known RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	RLM1	Q12224	676 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	YDR215C	Q12240	137 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	PFK27	Q12471	397 aa	Predicted RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	MRPL23	Q12487	163 aa	Predicted RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	UNG1	P12887	359 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	RPL3	P14126	387 aa	Known RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	HMX1	P32339	317 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	YME2	P32843	850 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	TIF3	P34167	436 aa	Known RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	YHL012W	P38709	493 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	YHL017W	P38745	532 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	LSC1	P53598	329 aa	Known RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	ASI2	P53895	289 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	AQR1	P53943	586 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	YPL108W	Q02872	168 aa	Predicted RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	YDR239C	Q03780	787 aa		3.18	□□□□□ -1.9
MSH2	YOL090W	HRP1	Q99383	534 aa	Known RBP	3.18	□□□□□ -1.9
MSH2	YOL090W	SRB8	P25648	1427 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 668.1 ms