RNA–Protein interactions for RNA: YNL207W

RIO2, Essential serine kinase involved in the processing of 20S pre-rRNA, yeast

Gene RIO2, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIO2	YNL207W	YNL234W	P53857	426 aa		2.87	□□□□□ -1.95
RIO2	YNL207W	ZDS2	P54786	942 aa		2.87	□□□□□ -1.95
RIO2	YNL207W	MCP2	Q06567	569 aa		2.87	□□□□□ -1.95
RIO2	YNL207W	NKP1	Q12493	238 aa		2.87	□□□□□ -1.95
RIO2	YNL207W	RPB8	P20436	146 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	MCM10	P32354	571 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	PDR3	P33200	976 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	YPK3	P38070	525 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	BZZ1	P38822	633 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	RTS1	P38903	757 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.86	□□□□□ -1.95	not detected
RIO2	YNL207W	UIP3	P39547	235 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	AFG3	P39925	761 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	BUR6	P40096	142 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	FET5	P43561	622 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	SAD1	P43589	448 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	RRT6	P53117	311 aa	Predicted RBP	2.86	□□□□□ -1.95
RIO2	YNL207W	SMA1	Q02651	245 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	EKI1	Q03764	534 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	ARP10	Q04549	284 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	RTT103	Q05543	409 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	PSK2	Q08217	1101 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	YOL159C	Q08300	171 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	EDE1	P34216	1381 aa		2.86	□□□□□ -1.95
RIO2	YNL207W	BAR1	P12630	587 aa		2.85	□□□□□ -1.95
RIO2	YNL207W	LCB1	P25045	558 aa	Known RBP	2.85	□□□□□ -1.95
RIO2	YNL207W	ADH7	P25377	361 aa		2.85	□□□□□ -1.95
RIO2	YNL207W	ARP1	P38696	384 aa		2.85	□□□□□ -1.95
RIO2	YNL207W	DIA4	P38705	446 aa	Predicted RBP	2.85	□□□□□ -1.95
RIO2	YNL207W	YNG2	P38806	282 aa	Known RBP	2.85	□□□□□ -1.95
RIO2	YNL207W	YFR020W	P43600	232 aa		2.85	□□□□□ -1.95
RIO2	YNL207W	DIA3	P52290	468 aa		2.85	□□□□□ -1.95
RIO2	YNL207W	CUL3	P53202	744 aa		2.85	□□□□□ -1.95
RIO2	YNL207W	YGR127W	P53275	312 aa		2.85	□□□□□ -1.95
RIO2	YNL207W	YMR178W	Q03219	274 aa	Known RBP	2.85	□□□□□ -1.95
RIO2	YNL207W	CTL1	Q03220	320 aa	Known RBP	2.85	□□□□□ -1.95
RIO2	YNL207W	BSC1	Q12140	328 aa		2.85	□□□□□ -1.95
RIO2	YNL207W	INP53	Q12271	1107 aa		2.85	□□□□□ -1.95
RIO2	YNL207W	YOL087C	Q99247	1116 aa		2.85	□□□□□ -1.95
RIO2	YNL207W	PDB1	P32473	366 aa	Known RBP	2.84	□□□□□ -1.95
RIO2	YNL207W	RAD24	P32641	659 aa		2.84	□□□□□ -1.95
RIO2	YNL207W	NOP4	P37838	685 aa	Known RBP	2.84	□□□□□ -1.95
RIO2	YNL207W	RFC1	P38630	861 aa	Known RBP	2.84	□□□□□ -1.95
RIO2	YNL207W	PSD1	P39006	500 aa		2.84	□□□□□ -1.95
RIO2	YNL207W	YEL068C	P39977	110 aa		2.84	□□□□□ -1.95
RIO2	YNL207W	SEC24	P40482	926 aa	Known RBP	2.84	□□□□□ -1.95
RIO2	YNL207W	RTS2	P40962	232 aa		2.84	□□□□□ -1.95
RIO2	YNL207W	ATG27	P46989	271 aa		2.84	□□□□□ -1.95
RIO2	YNL207W	MEP3	P53390	489 aa		2.84	□□□□□ -1.95
RIO2	YNL207W	INA17	Q02888	182 aa		2.84	□□□□□ -1.95
RIO2	YNL207W	BUD22	Q04347	519 aa	Known RBP	2.84	□□□□□ -1.95
RIO2	YNL207W	RSF1	Q05043	376 aa		2.84	□□□□□ -1.95
RIO2	YNL207W	YDL121C	Q07541	149 aa		2.84	□□□□□ -1.95
RIO2	YNL207W	ATG9	Q12142	997 aa		2.84	□□□□□ -1.95
RIO2	YNL207W	TAH18	Q12181	623 aa		2.84	□□□□□ -1.95
RIO2	YNL207W	SEC53	P07283	254 aa	Known RBP	2.83	□□□□□ -1.96
RIO2	YNL207W	LYS14	P40971	790 aa		2.83	□□□□□ -1.96
RIO2	YNL207W	PTR3	P43606	678 aa		2.83	□□□□□ -1.96
RIO2	YNL207W	VPS72	Q03388	795 aa		2.83	□□□□□ -1.96
RIO2	YNL207W	RAD30	Q04049	632 aa		2.83	□□□□□ -1.96
RIO2	YNL207W	RIX7	Q07844	837 aa	Known RBP	2.83	□□□□□ -1.96
RIO2	YNL207W	ENT4	Q07872	247 aa		2.83	□□□□□ -1.96
RIO2	YNL207W	LEU9	Q12166	604 aa	Known RBP	2.83	□□□□□ -1.96
RIO2	YNL207W	NOP58	Q12499	511 aa	Known RBP	2.83	□□□□□ -1.96
RIO2	YNL207W	YBR126W-A	Q8TGU7	68 aa		2.83	□□□□□ -1.96
RIO2	YNL207W	ARG81	P05085	880 aa		2.82	□□□□□ -1.96
RIO2	YNL207W	CDC16	P09798	840 aa		2.82	□□□□□ -1.96
RIO2	YNL207W	RPN2	P32565	945 aa	Known RBP	2.82	□□□□□ -1.96
RIO2	YNL207W	SAC6	P32599	642 aa	Known RBP	2.82	□□□□□ -1.96
RIO2	YNL207W	MAL33	P38157	468 aa		2.82	□□□□□ -1.96
RIO2	YNL207W	RRP3	P38712	501 aa	Known RBP	2.82	□□□□□ -1.96
RIO2	YNL207W	DBP8	P38719	431 aa		2.82	□□□□□ -1.96
RIO2	YNL207W	PHO90	P39535	881 aa		2.82	□□□□□ -1.96
RIO2	YNL207W	YJL070C	P40361	888 aa		2.82	□□□□□ -1.96
RIO2	YNL207W	DPH1	P40487	425 aa	Known RBP	2.82	□□□□□ -1.96
RIO2	YNL207W	YIL060W	P40519	144 aa		2.82	□□□□□ -1.96
RIO2	YNL207W	IAH1	P41734	238 aa		2.82	□□□□□ -1.96
RIO2	YNL207W	FAR3	P46671	204 aa		2.82	□□□□□ -1.96
RIO2	YNL207W	SIP4	P46954	829 aa		2.82	□□□□□ -1.96
RIO2	YNL207W	STR3	P53101	465 aa	Known RBP	2.82	□□□□□ -1.96
RIO2	YNL207W	PKP2	P53170	491 aa		2.82	□□□□□ -1.96
RIO2	YNL207W	PIL1	P53252	339 aa	Known RBP	2.82	□□□□□ -1.96
RIO2	YNL207W	NUP100	Q02629	959 aa		2.82	□□□□□ -1.96
RIO2	YNL207W	YDR415C	Q04033	374 aa	Predicted RBP	2.82	□□□□□ -1.96
RIO2	YNL207W	ADE13	Q05911	482 aa	Known RBP	2.82	□□□□□ -1.96
RIO2	YNL207W	YLR352W	Q06479	807 aa		2.82	□□□□□ -1.96
RIO2	YNL207W	ETT1	Q08421	412 aa	Known RBP	2.82	□□□□□ -1.96
RIO2	YNL207W	SUI2	P20459	304 aa	Known RBP	2.81	□□□□□ -1.96
RIO2	YNL207W	GID7	P25569	745 aa		2.81	□□□□□ -1.96
RIO2	YNL207W	YIH1	P25637	258 aa		2.81	□□□□□ -1.96
RIO2	YNL207W	GAC1	P28006	793 aa		2.81	□□□□□ -1.96
RIO2	YNL207W	PAH1	P32567	862 aa		2.81	□□□□□ -1.96
RIO2	YNL207W	YNK1	P36010	153 aa	Known RBP	2.81	□□□□□ -1.96
RIO2	YNL207W	MIA40	P36046	403 aa		2.81	□□□□□ -1.96
RIO2	YNL207W	SNU114	P36048	1008 aa	Known RBP	2.81	□□□□□ -1.96
RIO2	YNL207W	AUR1	P36107	401 aa	Predicted RBP	2.81	□□□□□ -1.96
RIO2	YNL207W	ICS2	P38284	255 aa		2.81	□□□□□ -1.96
RIO2	YNL207W	NOP16	P40007	231 aa	Known RBP	2.81	□□□□□ -1.96
RIO2	YNL207W	YIR014W	P40570	242 aa		2.81	□□□□□ -1.96
RIO2	YNL207W	GUF1	P46943	645 aa		2.81	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms