RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A SSK1Q07084 712 aa1.51□□□□□ -2.17
YMR172C-AYMR172C-A AYT1Q12226 474 aa1.51□□□□□ -2.17
YMR172C-AYMR172C-A YCL021W-AQ96VH3 125 aa1.51□□□□□ -2.17
YMR172C-AYMR172C-A PRS1P32895 427 aaKnown RBP1.5□□□□□ -2.17
YMR172C-AYMR172C-A SIP2P34164 415 aaKnown RBP1.5□□□□□ -2.17
YMR172C-AYMR172C-A TUL1P36096 758 aa1.5□□□□□ -2.17
YMR172C-AYMR172C-A NPR2P39923 615 aa1.5□□□□□ -2.17
YMR172C-AYMR172C-A SWP82P43554 623 aa1.5□□□□□ -2.17
YMR172C-AYMR172C-A SMC3P47037 1230 aa1.5□□□□□ -2.17
YMR172C-AYMR172C-A TEP1P53916 434 aa1.5□□□□□ -2.17
YMR172C-AYMR172C-A SAM50P53969 484 aa1.5□□□□□ -2.17
YMR172C-AYMR172C-A APL4Q12028 832 aa1.5□□□□□ -2.17
YMR172C-AYMR172C-A YOL114CQ12322 202 aa1.5□□□□□ -2.17
YMR172C-AYMR172C-A PDH1Q12428 516 aaKnown RBP1.5□□□□□ -2.17
YMR172C-AYMR172C-A CAR1P00812 333 aaKnown RBP1.49□□□□□ -2.17
YMR172C-AYMR172C-A SPE2P21182 396 aa1.49□□□□□ -2.17
YMR172C-AYMR172C-A CDC15P27636 974 aa1.49□□□□□ -2.17
YMR172C-AYMR172C-A SNC1P31109 117 aa1.49□□□□□ -2.17
YMR172C-AYMR172C-A TFC3P34111 1160 aa1.49□□□□□ -2.17
YMR172C-AYMR172C-A ECM15P35195 104 aa1.49□□□□□ -2.17
YMR172C-AYMR172C-A NDT80P38830 627 aa1.49□□□□□ -2.17
YMR172C-AYMR172C-A SIM1P40472 476 aa1.49□□□□□ -2.17
YMR172C-AYMR172C-A ASE1P50275 885 aa1.49□□□□□ -2.17
YMR172C-AYMR172C-A BTN2P53286 410 aa1.49□□□□□ -2.17
YMR172C-AYMR172C-A CPR6P53691 371 aaKnown RBP1.49□□□□□ -2.17
YMR172C-AYMR172C-A WSC2P53832 503 aa1.49□□□□□ -2.17
YMR172C-AYMR172C-A TRS130Q03660 1102 aa1.49□□□□□ -2.17
YMR172C-AYMR172C-A EIS1Q05050 843 aaKnown RBP1.49□□□□□ -2.17
YMR172C-AYMR172C-A MHR1Q06630 226 aa1.49□□□□□ -2.17
YMR172C-AYMR172C-A RRP6Q12149 733 aaKnown RBP1.49□□□□□ -2.17
YMR172C-AYMR172C-A SOD1P00445 154 aaKnown RBP1.48□□□□□ -2.17
YMR172C-AYMR172C-A HEM2P05373 342 aa1.48□□□□□ -2.17
YMR172C-AYMR172C-A PIF1P07271 859 aa1.48□□□□□ -2.17
YMR172C-AYMR172C-A PMR1P13586 950 aa1.48□□□□□ -2.17
YMR172C-AYMR172C-A SAC6P32599 642 aaKnown RBP1.48□□□□□ -2.17
YMR172C-AYMR172C-A YKL050CP35736 922 aa1.48□□□□□ -2.17
YMR172C-AYMR172C-A ROT2P38138 954 aa1.48□□□□□ -2.17
YMR172C-AYMR172C-A PKP1P40530 394 aa1.48□□□□□ -2.17
YMR172C-AYMR172C-A TIS11P47977 285 aa1.48□□□□□ -2.17
YMR172C-AYMR172C-A CTF18P49956 741 aa1.48□□□□□ -2.17
YMR172C-AYMR172C-A TAN1P53072 289 aaPredicted RBP1.48□□□□□ -2.17
YMR172C-AYMR172C-A YMR160WQ03823 816 aa1.48□□□□□ -2.17
YMR172C-AYMR172C-A YOR387CQ08910 206 aa1.48□□□□□ -2.17
YMR172C-AYMR172C-A RRP12Q12754 1228 aaKnown RBP1.48□□□□□ -2.17
YMR172C-AYMR172C-A SNF3P10870 884 aa1.47□□□□□ -2.17
YMR172C-AYMR172C-A SST2P11972 698 aaKnown RBP1.47□□□□□ -2.17
YMR172C-AYMR172C-A SPT15P13393 240 aaKnown RBP1.47□□□□□ -2.17
YMR172C-AYMR172C-A RER1P25560 188 aa1.47□□□□□ -2.17
YMR172C-AYMR172C-A YME1P32795 747 aa1.47□□□□□ -2.17
YMR172C-AYMR172C-A PAD1P33751 242 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
YMR172C-AYMR172C-A YBL059WP34224 193 aa1.47□□□□□ -2.17
YMR172C-AYMR172C-A PMU1P36069 295 aa1.47□□□□□ -2.17
YMR172C-AYMR172C-A UBA4P38820 440 aa1.47□□□□□ -2.17
YMR172C-AYMR172C-A DPB11P47027 764 aaPredicted RBP1.47□□□□□ -2.17
YMR172C-AYMR172C-A ADE13Q05911 482 aaKnown RBP1.47□□□□□ -2.17
YMR172C-AYMR172C-A DIC1Q06143 298 aa1.47□□□□□ -2.17
YMR172C-AYMR172C-A ENT4Q07872 247 aa1.47□□□□□ -2.17
YMR172C-AYMR172C-A THI20Q08224 551 aa1.47□□□□□ -2.17
YMR172C-AYMR172C-A HNT3Q08702 217 aa1.47□□□□□ -2.17
YMR172C-AYMR172C-A ATR1P13090 542 aa1.46□□□□□ -2.18
YMR172C-AYMR172C-A NCP1P16603 691 aaKnown RBP1.46□□□□□ -2.18
YMR172C-AYMR172C-A CLB4P24871 460 aa1.46□□□□□ -2.18
YMR172C-AYMR172C-A SRB5P32585 307 aa1.46□□□□□ -2.18
YMR172C-AYMR172C-A GEX2P36173 615 aa1.46□□□□□ -2.18
YMR172C-AYMR172C-A MRPL36P36531 177 aa1.46□□□□□ -2.18
YMR172C-AYMR172C-A ANS1P38832 159 aa1.46□□□□□ -2.18
YMR172C-AYMR172C-A VPS27P40343 622 aaKnown RBP1.46□□□□□ -2.18
YMR172C-AYMR172C-A YGR210CP42942 411 aa1.46□□□□□ -2.18
YMR172C-AYMR172C-A MSO1P53604 210 aaKnown RBP1.46□□□□□ -2.18
YMR172C-AYMR172C-A GLO2Q05584 274 aa1.46□□□□□ -2.18
YMR172C-AYMR172C-A HIM1Q06674 414 aa1.46□□□□□ -2.18
YMR172C-AYMR172C-A ERG27Q12452 347 aaKnown RBP1.46□□□□□ -2.18
YMR172C-AYMR172C-A NAM9P27929 486 aa1.45□□□□□ -2.18
YMR172C-AYMR172C-A FUN19P28003 413 aaPredicted RBP1.45□□□□□ -2.18
YMR172C-AYMR172C-A CBF2P32504 956 aa1.45□□□□□ -2.18
YMR172C-AYMR172C-A SPR1P32603 445 aa1.45□□□□□ -2.18
YMR172C-AYMR172C-A GRX4P32642 244 aa1.45□□□□□ -2.18
YMR172C-AYMR172C-A PAF1P38351 445 aa1.45□□□□□ -2.18
YMR172C-AYMR172C-A LAG1P38703 411 aa1.45□□□□□ -2.18
YMR172C-AYMR172C-A VPS52P39904 641 aa1.45□□□□□ -2.18
YMR172C-AYMR172C-A YMR087WQ04299 284 aa1.45□□□□□ -2.18
YMR172C-AYMR172C-A YOL057WQ08225 711 aa1.45□□□□□ -2.18
YMR172C-AYMR172C-A TMA16Q08687 178 aa1.45□□□□□ -2.18
YMR172C-AYMR172C-A YER078W-AQ3E7A2 54 aa1.45□□□□□ -2.18
YMR172C-AYMR172C-A HHF1P02309 103 aaKnown RBP1.44□□□□□ -2.18
YMR172C-AYMR172C-A SUP35P05453 685 aaKnown RBP1.44□□□□□ -2.18
YMR172C-AYMR172C-A PGS1P25578 521 aa1.44□□□□□ -2.18
YMR172C-AYMR172C-A YBR138CP38277 524 aa1.44□□□□□ -2.18
YMR172C-AYMR172C-A DBP8P38719 431 aa1.44□□□□□ -2.18
YMR172C-AYMR172C-A SHO1P40073 367 aa1.44□□□□□ -2.18
YMR172C-AYMR172C-A ALG8P40351 577 aa1.44□□□□□ -2.18
YMR172C-AYMR172C-A PFK26P40433 827 aaKnown RBP1.44□□□□□ -2.18
YMR172C-AYMR172C-A STR3P53101 465 aaKnown RBP1.44□□□□□ -2.18
YMR172C-AYMR172C-A YLR152CP54072 576 aa1.44□□□□□ -2.18
YMR172C-AYMR172C-A YPL014WQ02606 381 aa1.44□□□□□ -2.18
YMR172C-AYMR172C-A RNY1Q02933 434 aaKnown RBP1.44□□□□□ -2.18
YMR172C-AYMR172C-A EMI2Q04409 500 aaKnown RBP1.44□□□□□ -2.18
YMR172C-AYMR172C-A COX17Q12287 69 aa1.44□□□□□ -2.18
YMR172C-AYMR172C-A ARG81P05085 880 aa1.43□□□□□ -2.18
YMR172C-AYMR172C-A TPK1P06244 397 aa1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms