RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	GRX7	P38068	203 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	ROT2	P38138	954 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	LEU5	P38702	357 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	ANS1	P38832	159 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	SPC72	P39723	622 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	ECM10	P39987	644 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	PFK26	P40433	827 aa	Known RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	HIS6	P40545	261 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	AXL1	P40851	1208 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	YFR016C	P43597	1233 aa	Known RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	CTK2	P46962	323 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	IKS1	P47042	667 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	COS10	P52924	374 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	COG1	P53079	417 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	PKP2	P53170	491 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	RSM28	Q03430	361 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	TMA16	Q08687	178 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	APL4	Q12028	832 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	NYV1	Q12255	253 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	HXK2	P04807	486 aa	Known RBP	0.48	□□□□□ -2.33
RCO1	YMR075W	SNF3	P10870	884 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	SSB1	P11484	613 aa	Known RBP	0.48	□□□□□ -2.33
RCO1	YMR075W	SPO16	P17122	198 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	SEC62	P21825	274 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	ATS1	P31386	333 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	ACH1	P32316	526 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	NDC1	P32500	655 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	TFC3	P34111	1160 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	YKL133C	P36066	463 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	FSH1	P38777	243 aa	Known RBP	0.48	□□□□□ -2.33
RCO1	YMR075W	UME6	P39001	836 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	PUG1	P40100	303 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	SSB2	P40150	613 aa	Known RBP	0.48	□□□□□ -2.33
RCO1	YMR075W	SWP82	P43554	623 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	RPS7B	P48164	190 aa	Known RBP	0.48	□□□□□ -2.33
RCO1	YMR075W	ASE1	P50275	885 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	WSC2	P53832	503 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	DUG3	P53871	357 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	REG1	Q00816	1014 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	YVH1	Q02256	364 aa	Known RBP	0.48	□□□□□ -2.33
RCO1	YMR075W	NUP100	Q02629	959 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	MSS11	Q03825	758 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	RBA50	Q04418	439 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	ATG23	Q06671	453 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	PCD1	Q12524	340 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	YOR019W	Q99248	730 aa		0.48	□□□□□ -2.33
RCO1	YMR075W	NUC1	P08466	329 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	PRB1	P09232	635 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	TY2A-LR1	P0C2J4	438 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	TY2A-F	P0CX61	438 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	TY2A-GR2	P0CX62	438 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	BIK1	P11709	440 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	PRE8	P23639	250 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	TY2A-C	P25383	438 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	YKL050C	P35736	922 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	BUD16	P39988	312 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	SMC3	P47037	1230 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	RTT101	P47050	842 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	PUS4	P48567	403 aa	Known RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	SOL4	P53315	255 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	PAP2	P53632	584 aa	Known RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	HST1	P53685	503 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	CPR6	P53691	371 aa	Known RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	SMM1	P53720	384 aa	Known RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	ZDS2	P54786	942 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	MET14	Q02196	202 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	TY2A-DR2	Q03483	438 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	DIC1	Q06143	298 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	ECM30	Q06673	1274 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	TY2A-B	Q12260	438 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	TY2A-OR2	Q12293	438 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	TY2A-DR1	Q12392	438 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	TY2A-OR1	Q12439	438 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	TMA7	Q3E764	64 aa	Known RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	TY2A-DR3	Q99303	438 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	YLR302C	O13544	120 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	CAR1	P00812	333 aa	Known RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	HHF1	P02309	103 aa	Known RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	RPL20A	P0CX23	172 aa	Known RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	RPL20B	P0CX24	172 aa	Predicted RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	MRS3	P10566	314 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	PMR1	P13586	950 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	KRS1	P15180	591 aa	Known RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	SUI2	P20459	304 aa	Known RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	ISY1	P21374	235 aa	Predicted RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	CLB2	P24869	491 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	MTC4	P38335	694 aa	Known RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	DBP8	P38719	431 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	NDT80	P38830	627 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	VPS52	P39904	641 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	AFG3	P39925	761 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	YER130C	P39959	443 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	PHM8	P40025	321 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	BUR6	P40096	142 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	RGI2	P40188	164 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	IMA1	P53051	589 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	STR3	P53101	465 aa	Known RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	IST1	P53843	298 aa	Predicted RBP	0.47	□□□□□ -2.33
RCO1	YMR075W	MDG1	P53885	366 aa		0.47	□□□□□ -2.33
RCO1	YMR075W	TGL2	P54857	326 aa		0.47	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 66.9 ms