RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C ATG20Q07528 640 aa12.22□□□□□ -0.45
BDF1YLR399C TPO1Q07824 586 aa12.22□□□□□ -0.45
BDF1YLR399C RTR2Q12378 196 aa12.22□□□□□ -0.45
BDF1YLR399C TSC13Q99190 310 aa12.22□□□□□ -0.45
BDF1YLR399C YHR182WP38870 785 aa12.22□□□□□ -0.45
BDF1YLR399C GIP4P39732 760 aa12.22□□□□□ -0.45
BDF1YLR399C RPT2P40327 437 aaKnown RBP12.22□□□□□ -0.45
BDF1YLR399C GUF1P46943 645 aa12.22□□□□□ -0.45
BDF1YLR399C BPL1P48445 690 aaPredicted RBP12.22□□□□□ -0.45
BDF1YLR399C IMP4P53941 290 aaKnown RBP12.22□□□□□ -0.45
BDF1YLR399C DID2P69771 204 aa12.22□□□□□ -0.45
BDF1YLR399C PFK27Q12471 397 aaPredicted RBP12.22□□□□□ -0.45
BDF1YLR399C UBR2Q07963 1872 aa12.21□□□□□ -0.45
BDF1YLR399C YAP1P19880 650 aaKnown RBP12.21□□□□□ -0.45
BDF1YLR399C ROT2P38138 954 aa12.21□□□□□ -0.45
BDF1YLR399C BIO3P50277 480 aa12.21□□□□□ -0.45
BDF1YLR399C DIA3P52290 468 aa12.21□□□□□ -0.45
BDF1YLR399C GRX5Q02784 150 aa12.21□□□□□ -0.45
BDF1YLR399C YPL107WQ02873 248 aa12.21□□□□□ -0.45
BDF1YLR399C GPI11Q06636 219 aa12.21□□□□□ -0.45
BDF1YLR399C IZH4Q99393 312 aa12.21□□□□□ -0.45
BDF1YLR399C HMG1P12683 1054 aa12.2□□□□□ -0.46
BDF1YLR399C HSP26P15992 214 aaKnown RBP RIP-Chip data12.2□□□□□ -0.46not detected
BDF1YLR399C GIT1P25346 518 aa12.2□□□□□ -0.46
BDF1YLR399C APE2P32454 952 aaKnown RBP12.2□□□□□ -0.46
BDF1YLR399C BEM3P32873 1128 aa12.2□□□□□ -0.46
BDF1YLR399C NIC96P34077 839 aa12.2□□□□□ -0.46
BDF1YLR399C GPX2P38143 162 aa12.2□□□□□ -0.46
BDF1YLR399C IFA38P38286 347 aa12.2□□□□□ -0.46
BDF1YLR399C YHK8P38776 514 aa12.2□□□□□ -0.46
BDF1YLR399C ATG7P38862 630 aa12.2□□□□□ -0.46
BDF1YLR399C HUA2Q12134 243 aa12.2□□□□□ -0.46
BDF1YLR399C ATG31Q12421 196 aa12.2□□□□□ -0.46
BDF1YLR399C TIM9O74700 87 aa12.2□□□□□ -0.46
BDF1YLR399C ARG3P05150 338 aa12.2□□□□□ -0.46
BDF1YLR399C ERG20P08524 352 aaKnown RBP12.2□□□□□ -0.46
BDF1YLR399C PPQ1P32945 549 aa12.2□□□□□ -0.46
BDF1YLR399C SEA4P38164 1038 aa12.2□□□□□ -0.46
BDF1YLR399C YNL146WP53906 100 aa12.2□□□□□ -0.46
BDF1YLR399C INA17Q02888 182 aa12.2□□□□□ -0.46
BDF1YLR399C SNU56Q03782 492 aaKnown RBP12.2□□□□□ -0.46
BDF1YLR399C HPT1Q04178 221 aaKnown RBP12.2□□□□□ -0.46
BDF1YLR399C DLT1Q04216 342 aa12.2□□□□□ -0.46
BDF1YLR399C RQC1Q05468 723 aaKnown RBP12.2□□□□□ -0.46
BDF1YLR399C YPS7Q06325 596 aa12.2□□□□□ -0.46
BDF1YLR399C CBC2Q08920 208 aaKnown RBP RIP-Chip data12.2□□□□□ -0.46not detected
BDF1YLR399C URA3P03962 267 aa12.19□□□□□ -0.46
BDF1YLR399C PMA1P05030 918 aaKnown RBP12.19□□□□□ -0.46
BDF1YLR399C WHI2P12611 486 aa12.19□□□□□ -0.46
BDF1YLR399C IPI1P38803 334 aaPredicted RBP12.19□□□□□ -0.46
BDF1YLR399C MND2P40577 368 aa12.19□□□□□ -0.46
BDF1YLR399C COS4P43542 379 aa12.19□□□□□ -0.46
BDF1YLR399C MET13P53128 600 aa12.19□□□□□ -0.46
BDF1YLR399C YGR053CP53234 283 aa12.19□□□□□ -0.46
BDF1YLR399C YGR127WP53275 312 aa12.19□□□□□ -0.46
BDF1YLR399C SLM2P53955 656 aa12.19□□□□□ -0.46
BDF1YLR399C NGL2Q03264 515 aaKnown RBP12.19□□□□□ -0.46
BDF1YLR399C YLR455WQ06188 304 aa12.19□□□□□ -0.46
BDF1YLR399C SLD7Q08457 257 aa12.19□□□□□ -0.46
BDF1YLR399C PCD1Q12524 340 aa12.19□□□□□ -0.46
BDF1YLR399C YOL159C-AQ3E769 90 aa12.19□□□□□ -0.46
BDF1YLR399C THP2O13539 261 aaKnown RBP12.18□□□□□ -0.46
BDF1YLR399C GAL10P04397 699 aa12.18□□□□□ -0.46
BDF1YLR399C GPH1P06738 902 aaKnown RBP12.18□□□□□ -0.46
BDF1YLR399C COQ8P27697 501 aa12.18□□□□□ -0.46
BDF1YLR399C SMI1P32566 505 aa12.18□□□□□ -0.46
BDF1YLR399C LSM12P38828 187 aaKnown RBP12.18□□□□□ -0.46
BDF1YLR399C IPT1P38954 527 aa12.18□□□□□ -0.46
BDF1YLR399C SPF1P39986 1215 aaKnown RBP12.18□□□□□ -0.46
BDF1YLR399C SNX4P47057 423 aa12.18□□□□□ -0.46
BDF1YLR399C SOL4P53315 255 aa12.18□□□□□ -0.46
BDF1YLR399C CPR8P53728 308 aa12.18□□□□□ -0.46
BDF1YLR399C OSW2Q12202 724 aa12.18□□□□□ -0.46
BDF1YLR399C NSI1Q12457 570 aa12.18□□□□□ -0.46
BDF1YLR399C YPL247CQ12523 523 aa12.18□□□□□ -0.46
BDF1YLR399C PRC1P00729 532 aa12.18□□□□□ -0.46
BDF1YLR399C FUN30P31380 1131 aa12.18□□□□□ -0.46
BDF1YLR399C GRE3P38715 327 aaKnown RBP RIP-Chip data12.18□□□□□ -0.46not detected
BDF1YLR399C ARN2P38724 620 aa12.18□□□□□ -0.46
BDF1YLR399C SCD6P45978 349 aaKnown RBP RIP-Chip data12.18□□□□□ -0.46 RIP-Chip
BDF1YLR399C KEL2P50090 882 aa12.18□□□□□ -0.46
BDF1YLR399C SDH1Q00711 640 aa12.18□□□□□ -0.46
BDF1YLR399C PPN1Q04119 674 aa12.18□□□□□ -0.46
BDF1YLR399C BCH1Q05029 724 aa12.18□□□□□ -0.46
BDF1YLR399C ECM38Q05902 660 aaPredicted RBP12.18□□□□□ -0.46
BDF1YLR399C MSC6Q08818 692 aaKnown RBP12.18□□□□□ -0.46
BDF1YLR399C SMF3Q12078 473 aaPredicted RBP12.18□□□□□ -0.46
BDF1YLR399C TRM10Q12400 293 aa12.18□□□□□ -0.46
BDF1YLR399C SAS5Q99314 248 aa12.18□□□□□ -0.46
BDF1YLR399C CBP2P03874 630 aaPredicted RBP12.17□□□□□ -0.46
BDF1YLR399C INO1P11986 533 aa12.17□□□□□ -0.46
BDF1YLR399C CHA1P25379 360 aaKnown RBP12.17□□□□□ -0.46
BDF1YLR399C NMD3P38861 518 aaKnown RBP12.17□□□□□ -0.46
BDF1YLR399C MNN9P39107 395 aaKnown RBP12.17□□□□□ -0.46
BDF1YLR399C FHL1P39521 936 aa12.17□□□□□ -0.46
BDF1YLR399C SOP4P39543 234 aaPredicted RBP12.17□□□□□ -0.46
BDF1YLR399C YKE4P40544 346 aa12.17□□□□□ -0.46
BDF1YLR399C YJL171CP46992 396 aa12.17□□□□□ -0.46
BDF1YLR399C YJR154WP47181 346 aa12.17□□□□□ -0.46
BDF1YLR399C MND1P53102 219 aa12.17□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms