RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W ARA2Q04212 335 aa3.92□□□□□ -1.78
SSL1YLR005W YDR061WQ12298 539 aa3.92□□□□□ -1.78
SSL1YLR005W TRA1P38811 3744 aa3.92□□□□□ -1.78
SSL1YLR005W BI2P03873 423 aa3.91□□□□□ -1.78
SSL1YLR005W YKR104WP0CE69 306 aa3.91□□□□□ -1.78
SSL1YLR005W EST1P17214 699 aaPredicted RBP3.91□□□□□ -1.78
SSL1YLR005W PRP9P19736 530 aaKnown RBP3.91□□□□□ -1.78
SSL1YLR005W DAL82P21705 255 aa3.91□□□□□ -1.78
SSL1YLR005W GSY2P27472 705 aa3.91□□□□□ -1.78
SSL1YLR005W KAR9P32526 644 aa3.91□□□□□ -1.78
SSL1YLR005W REC104P33323 182 aa3.91□□□□□ -1.78
SSL1YLR005W YET1P35723 206 aa3.91□□□□□ -1.78
SSL1YLR005W UBS1P38290 277 aa3.91□□□□□ -1.78
SSL1YLR005W SWC5P38326 303 aa3.91□□□□□ -1.78
SSL1YLR005W MSR1P38714 643 aa3.91□□□□□ -1.78
SSL1YLR005W MIP6P38760 659 aaKnown RBP3.91□□□□□ -1.78
SSL1YLR005W PPE1P38796 400 aa3.91□□□□□ -1.78
SSL1YLR005W CCT6P39079 546 aa3.91□□□□□ -1.78
SSL1YLR005W ELO1P39540 310 aa3.91□□□□□ -1.78
SSL1YLR005W RAD26P40352 1085 aa3.91□□□□□ -1.78
SSL1YLR005W RPS10BP46784 105 aaKnown RBP3.91□□□□□ -1.78
SSL1YLR005W TIM54P47045 478 aa3.91□□□□□ -1.78
SSL1YLR005W AMA1P50082 593 aa3.91□□□□□ -1.78
SSL1YLR005W MNT2P53059 558 aa3.91□□□□□ -1.78
SSL1YLR005W YGR111WP53265 400 aa3.91□□□□□ -1.78
SSL1YLR005W YGR283CP53336 341 aaPredicted RBP3.91□□□□□ -1.78
SSL1YLR005W INP2Q03824 705 aa3.91□□□□□ -1.78
SSL1YLR005W YML096WQ04489 525 aa3.91□□□□□ -1.78
SSL1YLR005W YPR114WQ06107 315 aa3.91□□□□□ -1.78
SSL1YLR005W RPS10AQ08745 105 aaPredicted RBP3.91□□□□□ -1.78
SSL1YLR005W YOR389WQ08912 624 aa3.91□□□□□ -1.78
SSL1YLR005W YPL278CQ08990 100 aa3.91□□□□□ -1.78
SSL1YLR005W RKM5Q12367 367 aa3.91□□□□□ -1.78
SSL1YLR005W YIL046W-AQ3E7Z4 54 aa3.91□□□□□ -1.78
SSL1YLR005W BI3Q9ZZW7 517 aa3.91□□□□□ -1.78
SSL1YLR005W INH1P01097 85 aa3.9□□□□□ -1.78
SSL1YLR005W TRP4P07285 380 aaPredicted RBP3.9□□□□□ -1.78
SSL1YLR005W RIP1P08067 215 aa3.9□□□□□ -1.78
SSL1YLR005W RPL1AP0CX43 217 aaKnown RBP3.9□□□□□ -1.78
SSL1YLR005W RPL1BP0CX44 217 aaKnown RBP3.9□□□□□ -1.78
SSL1YLR005W ABF1P14164 731 aa3.9□□□□□ -1.78
SSL1YLR005W SNT1P25357 1226 aa3.9□□□□□ -1.78
SSL1YLR005W ADY2P25613 283 aa3.9□□□□□ -1.78
SSL1YLR005W OAR1P35731 278 aa3.9□□□□□ -1.78
SSL1YLR005W PBP2P38151 413 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
SSL1YLR005W TAE1P38340 232 aa3.9□□□□□ -1.78
SSL1YLR005W SPT8P38915 602 aa3.9□□□□□ -1.78
SSL1YLR005W SMC2P38989 1170 aaKnown RBP3.9□□□□□ -1.78
SSL1YLR005W SDP1P40479 209 aa3.9□□□□□ -1.78
SSL1YLR005W YIL054WP40524 105 aa3.9□□□□□ -1.78
SSL1YLR005W MKT1P40850 830 aaKnown RBP3.9□□□□□ -1.78
SSL1YLR005W YFR018CP43599 363 aa3.9□□□□□ -1.78
SSL1YLR005W DLD2P46681 530 aaKnown RBP3.9□□□□□ -1.78
SSL1YLR005W GLG2P47011 380 aa3.9□□□□□ -1.78
SSL1YLR005W SPC105P53148 917 aa3.9□□□□□ -1.78
SSL1YLR005W YGR266WP53326 701 aa3.9□□□□□ -1.78
SSL1YLR005W IPI3P53877 555 aa3.9□□□□□ -1.78
SSL1YLR005W ERG5P54781 538 aa3.9□□□□□ -1.78
SSL1YLR005W VPS9P54787 451 aa3.9□□□□□ -1.78
SSL1YLR005W TGL2P54857 326 aa3.9□□□□□ -1.78
SSL1YLR005W YKR011CQ02209 353 aa3.9□□□□□ -1.78
SSL1YLR005W RSM10Q03201 203 aa3.9□□□□□ -1.78
SSL1YLR005W RPC11Q04307 110 aaPredicted RBP3.9□□□□□ -1.78
SSL1YLR005W TRE2Q08693 809 aa3.9□□□□□ -1.78
SSL1YLR005W CWC2Q12046 339 aaPredicted RBP3.9□□□□□ -1.78
SSL1YLR005W GPM3Q12326 303 aa3.9□□□□□ -1.78
SSL1YLR005W HBN1Q96VH4 193 aa3.9□□□□□ -1.78
SSL1YLR005W YOR338WQ99326 363 aa3.9□□□□□ -1.78
SSL1YLR005W KAR3P17119 729 aa3.89□□□□□ -1.79
SSL1YLR005W PMA2P19657 947 aa3.89□□□□□ -1.79
SSL1YLR005W AAT2P23542 418 aaKnown RBP3.89□□□□□ -1.79
SSL1YLR005W CWP1P28319 239 aa3.89□□□□□ -1.79
SSL1YLR005W VPS24P36095 224 aaKnown RBP3.89□□□□□ -1.79
SSL1YLR005W LRP1P38801 184 aaKnown RBP3.89□□□□□ -1.79
SSL1YLR005W STN1P38960 494 aa3.89□□□□□ -1.79
SSL1YLR005W ERP2P39704 215 aa3.89□□□□□ -1.79
SSL1YLR005W YEL028WP39989 153 aa3.89□□□□□ -1.79
SSL1YLR005W IST3P40565 148 aaPredicted RBP3.89□□□□□ -1.79
SSL1YLR005W SIP4P46954 829 aa3.89□□□□□ -1.79
SSL1YLR005W EMC4P53073 190 aa3.89□□□□□ -1.79
SSL1YLR005W YNL143CP53908 130 aa3.89□□□□□ -1.79
SSL1YLR005W TEP1P53916 434 aa3.89□□□□□ -1.79
SSL1YLR005W INA17Q02888 182 aa3.89□□□□□ -1.79
SSL1YLR005W YDR222WQ04925 415 aa3.89□□□□□ -1.79
SSL1YLR005W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
SSL1YLR005W TGL5Q12043 749 aa3.89□□□□□ -1.79
SSL1YLR005W SKM1Q12469 655 aa3.89□□□□□ -1.79
SSL1YLR005W SEC39Q12745 709 aa3.89□□□□□ -1.79
SSL1YLR005W AFI1Q99222 893 aa3.89□□□□□ -1.79
SSL1YLR005W SEY1Q99287 776 aa3.89□□□□□ -1.79
SSL1YLR005W SCH9P11792 824 aaKnown RBP3.89□□□□□ -1.79
SSL1YLR005W TOP3P13099 656 aa3.89□□□□□ -1.79
SSL1YLR005W PTP1P25044 335 aa3.89□□□□□ -1.79
SSL1YLR005W ARE1P25628 610 aa3.89□□□□□ -1.79
SSL1YLR005W CIN8P27895 1000 aa3.89□□□□□ -1.79
SSL1YLR005W PMC1P38929 1173 aaPredicted RBP3.89□□□□□ -1.79
SSL1YLR005W TMN3P40071 706 aa3.89□□□□□ -1.79
SSL1YLR005W VFA1P40080 203 aa3.89□□□□□ -1.79
SSL1YLR005W TFG2P41896 400 aaPredicted RBP3.89□□□□□ -1.79
SSL1YLR005W YGL108CP53139 140 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms