RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W RKM3P38222 552 aa2.59□□□□□ -2
NIC96YFR002W NPR3P38742 1146 aa2.59□□□□□ -2
NIC96YFR002W CTK2P46962 323 aa2.59□□□□□ -2
NIC96YFR002W TY2A-DR2Q03483 438 aa2.59□□□□□ -2
NIC96YFR002W ATG16Q03818 150 aa2.59□□□□□ -2
NIC96YFR002W YTH1Q06102 208 aaPredicted RBP2.59□□□□□ -2
NIC96YFR002W TY2A-BQ12260 438 aa2.59□□□□□ -2
NIC96YFR002W COX17Q12287 69 aa2.59□□□□□ -2
NIC96YFR002W TY2A-OR2Q12293 438 aa2.59□□□□□ -2
NIC96YFR002W TY2A-DR1Q12392 438 aa2.59□□□□□ -2
NIC96YFR002W TY2A-OR1Q12439 438 aa2.59□□□□□ -2
NIC96YFR002W TY2A-DR3Q99303 438 aa2.59□□□□□ -2
NIC96YFR002W ROM2P51862 1356 aaKnown RBP2.58□□□□□ -2
NIC96YFR002W PHO81P17442 1178 aa2.58□□□□□ -2
NIC96YFR002W MSM1P22438 575 aa2.58□□□□□ -2
NIC96YFR002W PPZ1P26570 692 aa2.58□□□□□ -2
NIC96YFR002W NUP120P35729 1037 aa2.58□□□□□ -2
NIC96YFR002W LHS1P36016 881 aa2.58□□□□□ -2
NIC96YFR002W RTT107P38850 1070 aa2.58□□□□□ -2
NIC96YFR002W HXT9P40885 567 aa2.58□□□□□ -2
NIC96YFR002W SAD1P43589 448 aa2.58□□□□□ -2
NIC96YFR002W PSP1P50896 841 aaKnown RBP2.58□□□□□ -2
NIC96YFR002W YGR021WP53212 290 aa2.58□□□□□ -2
NIC96YFR002W TMA64Q04600 565 aaKnown RBP2.58□□□□□ -2
NIC96YFR002W YMR317WQ04893 1140 aa2.58□□□□□ -2
NIC96YFR002W UTP21Q06078 939 aaPredicted RBP2.58□□□□□ -2
NIC96YFR002W YLL066CQ99208 1374 aa2.58□□□□□ -2
NIC96YFR002W PSF2P40359 213 aa2.58□□□□□ -2
NIC96YFR002W COG1P53079 417 aa2.58□□□□□ -2
NIC96YFR002W YTP1P53584 459 aa2.58□□□□□ -2
NIC96YFR002W PAP2P53632 584 aaKnown RBP2.58□□□□□ -2
NIC96YFR002W MDG1P53885 366 aa2.58□□□□□ -2
NIC96YFR002W TMA16Q08687 178 aa2.58□□□□□ -2
NIC96YFR002W MTF2P10849 440 aa2.57□□□□□ -2
NIC96YFR002W CLB2P24869 491 aa2.57□□□□□ -2
NIC96YFR002W MGR1P25573 417 aa2.57□□□□□ -2
NIC96YFR002W SEC1P30619 724 aaKnown RBP2.57□□□□□ -2
NIC96YFR002W IFA38P38286 347 aa2.57□□□□□ -2
NIC96YFR002W SEC31P38968 1273 aaKnown RBP2.57□□□□□ -2
NIC96YFR002W ERP2P39704 215 aa2.57□□□□□ -2
NIC96YFR002W ECM10P39987 644 aa2.57□□□□□ -2
NIC96YFR002W MRX1P40050 688 aa2.57□□□□□ -2
NIC96YFR002W FAF1P40546 346 aaPredicted RBP2.57□□□□□ -2
NIC96YFR002W ASE1P50275 885 aa2.57□□□□□ -2
NIC96YFR002W SGF73P53165 657 aa2.57□□□□□ -2
NIC96YFR002W YNR061CP53747 219 aa2.57□□□□□ -2
NIC96YFR002W YNL181WP53878 407 aa2.57□□□□□ -2
NIC96YFR002W MCP2Q06567 569 aa2.57□□□□□ -2
NIC96YFR002W YMR230W-AQ3E7B5 62 aa2.57□□□□□ -2
NIC96YFR002W HNM1P19807 563 aa2.57□□□□□ -2
NIC96YFR002W SOF1P33750 489 aaKnown RBP2.57□□□□□ -2
NIC96YFR002W VRG4P40107 337 aa2.57□□□□□ -2
NIC96YFR002W RPN11P43588 306 aaKnown RBP2.57□□□□□ -2
NIC96YFR002W YGL260WP53056 76 aa2.57□□□□□ -2
NIC96YFR002W UBX4P54730 416 aa2.57□□□□□ -2
NIC96YFR002W RSM28Q03430 361 aa2.57□□□□□ -2
NIC96YFR002W PHO2P07269 559 aa2.56□□□□□ -2
NIC96YFR002W RAP1P11938 827 aa2.56□□□□□ -2
NIC96YFR002W UBC1P21734 215 aaKnown RBP2.56□□□□□ -2
NIC96YFR002W SAC1P32368 623 aaKnown RBP2.56□□□□□ -2
NIC96YFR002W SRB5P32585 307 aa2.56□□□□□ -2
NIC96YFR002W PDR3P33200 976 aa2.56□□□□□ -2
NIC96YFR002W FMP46P36141 133 aaKnown RBP2.56□□□□□ -2
NIC96YFR002W YFR020WP43600 232 aa2.56□□□□□ -2
NIC96YFR002W SMA1Q02651 245 aa2.56□□□□□ -2
NIC96YFR002W EKI1Q03764 534 aa2.56□□□□□ -2
NIC96YFR002W ARP10Q04549 284 aa2.56□□□□□ -2
NIC96YFR002W COG4Q06096 861 aa2.56□□□□□ -2
NIC96YFR002W PGI1P12709 554 aaKnown RBP2.56□□□□□ -2
NIC96YFR002W MPE1P35728 441 aaKnown RBP2.56□□□□□ -2
NIC96YFR002W YPK3P38070 525 aa2.56□□□□□ -2
NIC96YFR002W BZZ1P38822 633 aa2.56□□□□□ -2
NIC96YFR002W RRT6P53117 311 aaPredicted RBP2.56□□□□□ -2
NIC96YFR002W MRPL13Q02204 264 aa2.56□□□□□ -2
NIC96YFR002W TPK1P06244 397 aa2.55□□□□□ -2
NIC96YFR002W NUC1P08466 329 aa2.55□□□□□ -2
NIC96YFR002W MRPL36P36531 177 aa2.55□□□□□ -2
NIC96YFR002W RFC1P38630 861 aaKnown RBP2.55□□□□□ -2
NIC96YFR002W YNL234WP53857 426 aa2.55□□□□□ -2
NIC96YFR002W VMS1Q04311 632 aaKnown RBP2.55□□□□□ -2
NIC96YFR002W VCX1Q99385 411 aa2.55□□□□□ -2
NIC96YFR002W DPB3P27344 201 aa2.54□□□□□ -2
NIC96YFR002W RAD24P32641 659 aa2.54□□□□□ -2
NIC96YFR002W VID27P40157 782 aa2.54□□□□□ -2
NIC96YFR002W CTL1Q03220 320 aaKnown RBP2.54□□□□□ -2
NIC96YFR002W YOL159CQ08300 171 aa2.54□□□□□ -2
NIC96YFR002W TAH18Q12181 623 aa2.54□□□□□ -2
NIC96YFR002W ENT1Q12518 454 aa2.54□□□□□ -2
NIC96YFR002W URB1P34241 1764 aaKnown RBP2.54□□□□□ -2
NIC96YFR002W BAR1P12630 587 aa2.54□□□□□ -2
NIC96YFR002W TFC3P34111 1160 aa2.54□□□□□ -2
NIC96YFR002W RTS2P40962 232 aa2.54□□□□□ -2
NIC96YFR002W FET5P43561 622 aa2.54□□□□□ -2
NIC96YFR002W ATG27P46989 271 aa2.54□□□□□ -2
NIC96YFR002W CTF18P49956 741 aa2.54□□□□□ -2
NIC96YFR002W CUL3P53202 744 aa2.54□□□□□ -2
NIC96YFR002W RSF1Q05043 376 aa2.54□□□□□ -2
NIC96YFR002W BLS1Q06071 122 aa2.54□□□□□ -2
NIC96YFR002W CSR1Q06705 408 aaKnown RBP2.54□□□□□ -2
NIC96YFR002W ARP1P38696 384 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms