RNA–Protein interactions for RNA: YFL040W

YFL040W, Transcript of Putative transporter, yeast

Gene YFL040W, Length 1,623 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YFL040W	YFL040W	YOR019W	Q99248	730 aa		4.25	□□□□□ -1.73
YFL040W	YFL040W	URE2	P23202	354 aa	Known RBP	4.24	□□□□□ -1.73
YFL040W	YFL040W	ROX1	P25042	368 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	BYE1	P36106	594 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	ERV46	P39727	415 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	PHM8	P40025	321 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	JHD1	P40034	492 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	IRC7	P43623	340 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	YPR003C	P53394	754 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	RPT6	Q01939	405 aa	Known RBP	4.24	□□□□□ -1.73
YFL040W	YFL040W	MUB1	Q03162	620 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	FCP1	Q03254	732 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	ARP9	Q05123	467 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	CRN1	Q06440	651 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	CTI6	Q08923	506 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	SNQ2	P32568	1501 aa	Known RBP	4.24	□□□□□ -1.73
YFL040W	YFL040W	PDR10	P51533	1564 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	SRB5	P32585	307 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	KTR3	P38130	404 aa	Predicted RBP	4.24	□□□□□ -1.73
YFL040W	YFL040W	SRO77	P38163	1010 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	FLC2	P39719	783 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	SLZ1	P40167	298 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	AXL1	P40851	1208 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	RIM13	Q03792	727 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	YMR155W	Q03795	547 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	THI3	Q07471	609 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	NUS1	Q12063	375 aa		4.24	□□□□□ -1.73
YFL040W	YFL040W	NOP58	Q12499	511 aa	Known RBP	4.24	□□□□□ -1.73
YFL040W	YFL040W	IQG1	Q12280	1495 aa		4.23	□□□□□ -1.73
YFL040W	YFL040W	ILS1	P09436	1072 aa	Known RBP	4.23	□□□□□ -1.73
YFL040W	YFL040W	SRP54	P20424	541 aa	Known RBP	4.23	□□□□□ -1.73
YFL040W	YFL040W	UBP13	P38187	747 aa		4.23	□□□□□ -1.73
YFL040W	YFL040W	YBL029W	P38201	376 aa		4.23	□□□□□ -1.73
YFL040W	YFL040W	ASG1	P40467	964 aa		4.23	□□□□□ -1.73
YFL040W	YFL040W	ARF3	P40994	183 aa	RIP-Chip data	4.23	□□□□□ -1.73	not detected
YFL040W	YFL040W	LYS4	P49367	693 aa	Predicted RBP	4.23	□□□□□ -1.73
YFL040W	YFL040W	ORC5	P50874	479 aa		4.23	□□□□□ -1.73
YFL040W	YFL040W	GET3	Q12154	354 aa	Known RBP	4.23	□□□□□ -1.73
YFL040W	YFL040W	RTN2	Q12443	393 aa		4.23	□□□□□ -1.73
YFL040W	YFL040W	POL4	P25615	582 aa		4.22	□□□□□ -1.73
YFL040W	YFL040W	ECM32	P32644	1121 aa	Known RBP	4.22	□□□□□ -1.73
YFL040W	YFL040W	YKL050C	P35736	922 aa		4.22	□□□□□ -1.73
YFL040W	YFL040W	YEL057C	P39983	233 aa		4.22	□□□□□ -1.73
YFL040W	YFL040W	CDC1	P40986	491 aa		4.22	□□□□□ -1.73
YFL040W	YFL040W	SNO3	P43544	222 aa		4.22	□□□□□ -1.73
YFL040W	YFL040W	YGL036W	P53185	909 aa	Predicted RBP	4.22	□□□□□ -1.73
YFL040W	YFL040W	IDP3	P53982	420 aa	Known RBP	4.22	□□□□□ -1.73
YFL040W	YFL040W	RSC9	Q03124	581 aa		4.22	□□□□□ -1.73
YFL040W	YFL040W	SXM1	Q04175	944 aa	Known RBP	4.22	□□□□□ -1.73
YFL040W	YFL040W	SPE4	Q12455	300 aa		4.22	□□□□□ -1.73
YFL040W	YFL040W	CBS1	P14066	229 aa		4.21	□□□□□ -1.73
YFL040W	YFL040W	OPI1	P21957	404 aa		4.21	□□□□□ -1.73
YFL040W	YFL040W	PRE8	P23639	250 aa		4.21	□□□□□ -1.73
YFL040W	YFL040W	MSS51	P32335	436 aa		4.21	□□□□□ -1.73
YFL040W	YFL040W	SWI3	P32591	825 aa		4.21	□□□□□ -1.73
YFL040W	YFL040W	AAP1	P37898	856 aa	Known RBP	4.21	□□□□□ -1.73
YFL040W	YFL040W	RTS1	P38903	757 aa		4.21	□□□□□ -1.73
YFL040W	YFL040W	SEC24	P40482	926 aa	Known RBP	4.21	□□□□□ -1.73
YFL040W	YFL040W	IME4	P41833	600 aa		4.21	□□□□□ -1.73
YFL040W	YFL040W	SWP82	P43554	623 aa		4.21	□□□□□ -1.73
YFL040W	YFL040W	LCL3	P53153	274 aa		4.21	□□□□□ -1.73
YFL040W	YFL040W	YLR352W	Q06479	807 aa		4.21	□□□□□ -1.73
YFL040W	YFL040W	GPN2	Q08726	347 aa	Predicted RBP	4.21	□□□□□ -1.73
YFL040W	YFL040W	RCN2	Q12044	265 aa		4.21	□□□□□ -1.73
YFL040W	YFL040W	PDR15	Q04182	1529 aa	Known RBP	4.21	□□□□□ -1.74
YFL040W	YFL040W	DNF3	Q12674	1656 aa		4.21	□□□□□ -1.74
YFL040W	YFL040W	YMR085W	P0CF18	432 aa		4.21	□□□□□ -1.74
YFL040W	YFL040W	LCB1	P25045	558 aa	Known RBP	4.21	□□□□□ -1.74
YFL040W	YFL040W	PEP3	P27801	918 aa		4.21	□□□□□ -1.74
YFL040W	YFL040W	NTR2	P36118	322 aa	Predicted RBP	4.21	□□□□□ -1.74
YFL040W	YFL040W	MAL33	P38157	468 aa		4.21	□□□□□ -1.74
YFL040W	YFL040W	LTP1	P40347	161 aa		4.21	□□□□□ -1.74
YFL040W	YFL040W	XBP1	P40489	647 aa		4.21	□□□□□ -1.74
YFL040W	YFL040W	PDR12	Q02785	1511 aa		4.2	□□□□□ -1.74
YFL040W	YFL040W	GDB1	Q06625	1536 aa		4.2	□□□□□ -1.74
YFL040W	YFL040W	PDX1	P16451	410 aa		4.2	□□□□□ -1.74
YFL040W	YFL040W	OCA4	P25366	362 aa		4.2	□□□□□ -1.74
YFL040W	YFL040W	CDC15	P27636	974 aa		4.2	□□□□□ -1.74
YFL040W	YFL040W	ADE17	P38009	592 aa	Known RBP	4.2	□□□□□ -1.74
YFL040W	YFL040W	UTP9	P38882	575 aa	Known RBP	4.2	□□□□□ -1.74
YFL040W	YFL040W	SEC31	P38968	1273 aa	Known RBP	4.2	□□□□□ -1.74
YFL040W	YFL040W	MRX1	P40050	688 aa		4.2	□□□□□ -1.74
YFL040W	YFL040W	RGI2	P40188	164 aa		4.2	□□□□□ -1.74
YFL040W	YFL040W	YJL107C	P42947	387 aa		4.2	□□□□□ -1.74
YFL040W	YFL040W	GLO1	P50107	326 aa		4.2	□□□□□ -1.74
YFL040W	YFL040W	RSM28	Q03430	361 aa		4.2	□□□□□ -1.74
YFL040W	YFL040W	YDR131C	Q03899	556 aa		4.2	□□□□□ -1.74
YFL040W	YFL040W	GRX6	Q12438	231 aa		4.2	□□□□□ -1.74
YFL040W	YFL040W	YOL159C-A	Q3E769	90 aa		4.2	□□□□□ -1.74
YFL040W	YFL040W	NUP157	P40064	1391 aa	Known RBP	4.19	□□□□□ -1.74
YFL040W	YFL040W	MDM10	P18409	493 aa		4.19	□□□□□ -1.74
YFL040W	YFL040W	YCR006C	P25350	157 aa		4.19	□□□□□ -1.74
YFL040W	YFL040W	COQ3	P27680	312 aa		4.19	□□□□□ -1.74
YFL040W	YFL040W	SOF1	P33750	489 aa	Known RBP	4.19	□□□□□ -1.74
YFL040W	YFL040W	PXA2	P34230	853 aa		4.19	□□□□□ -1.74
YFL040W	YFL040W	LHS1	P36016	881 aa		4.19	□□□□□ -1.74
YFL040W	YFL040W	ARN1	P38731	627 aa		4.19	□□□□□ -1.74
YFL040W	YFL040W	ULP2	P40537	1034 aa	Predicted RBP	4.19	□□□□□ -1.74
YFL040W	YFL040W	ERG13	P54839	491 aa	Known RBP	4.19	□□□□□ -1.74
YFL040W	YFL040W	YML122C	Q03207	126 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms