RNA–Protein interactions for RNA: YER011W

TIR1, Transcript of Cell wall mannoprotein, yeast

Gene TIR1, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR1	YER011W	MDY2	Q12285	212 aa		13.42	□□□□□ -0.26
TIR1	YER011W	INH1	P01097	85 aa		13.41	□□□□□ -0.26
TIR1	YER011W	SNT1	P25357	1226 aa		13.41	□□□□□ -0.26
TIR1	YER011W	MSH1	P25846	959 aa		13.41	□□□□□ -0.26
TIR1	YER011W	PTM1	P32857	523 aa		13.41	□□□□□ -0.26
TIR1	YER011W	SQT1	P35184	431 aa		13.41	□□□□□ -0.26
TIR1	YER011W	WSC4	P38739	605 aa		13.41	□□□□□ -0.26
TIR1	YER011W	SSN3	P39073	555 aa		13.41	□□□□□ -0.26
TIR1	YER011W	GCD14	P46959	383 aa	Predicted RBP	13.41	□□□□□ -0.26
TIR1	YER011W	DAN4	P47179	1161 aa		13.41	□□□□□ -0.26
TIR1	YER011W	CLD1	P53264	445 aa		13.41	□□□□□ -0.26
TIR1	YER011W	SPO20	Q04359	397 aa		13.41	□□□□□ -0.26
TIR1	YER011W	SSL1	Q04673	461 aa	Predicted RBP	13.41	□□□□□ -0.26
TIR1	YER011W	RCO1	Q04779	684 aa		13.41	□□□□□ -0.26
TIR1	YER011W	MFB1	Q04922	465 aa		13.41	□□□□□ -0.26
TIR1	YER011W	UTP13	Q05946	817 aa	Known RBP	13.41	□□□□□ -0.26
TIR1	YER011W	TRM8	Q12009	286 aa		13.41	□□□□□ -0.26
TIR1	YER011W	RRP3	P38712	501 aa	Known RBP	13.4	□□□□□ -0.26
TIR1	YER011W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	13.4	□□□□□ -0.26	not detected
TIR1	YER011W	TIF34	P40217	347 aa	Known RBP	13.4	□□□□□ -0.26
TIR1	YER011W	GOT1	Q03554	138 aa		13.4	□□□□□ -0.26
TIR1	YER011W	TAF12	Q03761	539 aa		13.4	□□□□□ -0.26
TIR1	YER011W	RSC3	Q06639	885 aa		13.4	□□□□□ -0.26
TIR1	YER011W	VPS68	Q12016	184 aa		13.4	□□□□□ -0.26
TIR1	YER011W	APC9	Q12107	265 aa		13.4	□□□□□ -0.26
TIR1	YER011W	CIN8	P27895	1000 aa		13.39	□□□□□ -0.27
TIR1	YER011W	HEM3	P28789	327 aa		13.39	□□□□□ -0.27
TIR1	YER011W	YHR020W	P38708	688 aa	Known RBP	13.39	□□□□□ -0.27
TIR1	YER011W	PFS1	P38872	237 aa		13.39	□□□□□ -0.27
TIR1	YER011W	AXL1	P40851	1208 aa		13.39	□□□□□ -0.27
TIR1	YER011W	TDA10	P42938	290 aa		13.39	□□□□□ -0.27
TIR1	YER011W	ALR1	Q08269	859 aa		13.39	□□□□□ -0.27
TIR1	YER011W	YPR089W	O13585	888 aa		13.38	□□□□□ -0.27
TIR1	YER011W	TUB1	P09733	447 aa	Known RBP	13.38	□□□□□ -0.27
TIR1	YER011W	LOS1	P33418	1100 aa	Predicted RBP	13.38	□□□□□ -0.27
TIR1	YER011W	HSE1	P38753	452 aa		13.38	□□□□□ -0.27
TIR1	YER011W	LSM5	P40089	93 aa	Known RBP	13.38	□□□□□ -0.27
TIR1	YER011W	MEP1	P40260	492 aa		13.38	□□□□□ -0.27
TIR1	YER011W	GAT1	P43574	510 aa		13.38	□□□□□ -0.27
TIR1	YER011W	ARC1	P46672	376 aa	Known RBP	13.38	□□□□□ -0.27
TIR1	YER011W	MNN10	P50108	393 aa	Known RBP	13.38	□□□□□ -0.27
TIR1	YER011W	TEL2	P53038	688 aa		13.38	□□□□□ -0.27
TIR1	YER011W	TRM12	Q04235	462 aa		13.38	□□□□□ -0.27
TIR1	YER011W	YPL247C	Q12523	523 aa		13.38	□□□□□ -0.27
TIR1	YER011W	COX3	P00420	269 aa		13.37	□□□□□ -0.27
TIR1	YER011W	PHO5	P00635	467 aa		13.37	□□□□□ -0.27
TIR1	YER011W	YCR090C	P25654	182 aa	Known RBP	13.37	□□□□□ -0.27
TIR1	YER011W	YSC84	P32793	468 aa		13.37	□□□□□ -0.27
TIR1	YER011W	YPT52	P36018	234 aa	Known RBP	13.37	□□□□□ -0.27
TIR1	YER011W	RRN3	P36070	627 aa		13.37	□□□□□ -0.27
TIR1	YER011W	BIR1	P47134	954 aa		13.37	□□□□□ -0.27
TIR1	YER011W	TAF6	P53040	516 aa		13.37	□□□□□ -0.27
TIR1	YER011W	SEC10	Q06245	871 aa		13.37	□□□□□ -0.27
TIR1	YER011W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	13.37	□□□□□ -0.27	not detected
TIR1	YER011W	YMR085W	P0CF18	432 aa		13.36	□□□□□ -0.27
TIR1	YER011W	YAR066W	P0CX18	203 aa		13.36	□□□□□ -0.27
TIR1	YER011W	YHR214W	P0CX19	203 aa		13.36	□□□□□ -0.27
TIR1	YER011W	VPS34	P22543	875 aa		13.36	□□□□□ -0.27
TIR1	YER011W	VAC17	P25591	423 aa		13.36	□□□□□ -0.27
TIR1	YER011W	RSC6	P25632	483 aa		13.36	□□□□□ -0.27
TIR1	YER011W	RPF2	P36160	344 aa	Known RBP	13.36	□□□□□ -0.27
TIR1	YER011W	VRP1	P37370	817 aa		13.36	□□□□□ -0.27
TIR1	YER011W	YBR062C	P38239	180 aa		13.36	□□□□□ -0.27
TIR1	YER011W	YDR089W	P38966	869 aa		13.36	□□□□□ -0.27
TIR1	YER011W	AIF1	P52923	378 aa		13.36	□□□□□ -0.27
TIR1	YER011W	ZRG17	P53735	605 aa		13.36	□□□□□ -0.27
TIR1	YER011W	RMI1	Q02685	241 aa		13.36	□□□□□ -0.27
TIR1	YER011W	SRO7	Q12038	1033 aa		13.36	□□□□□ -0.27
TIR1	YER011W	HEM2	P05373	342 aa		13.35	□□□□□ -0.27
TIR1	YER011W	SWI5	P08153	709 aa		13.35	□□□□□ -0.27
TIR1	YER011W	YSR3	P23501	404 aa		13.35	□□□□□ -0.27
TIR1	YER011W	SKT5	P34226	696 aa		13.35	□□□□□ -0.27
TIR1	YER011W	VPS41	P38959	992 aa		13.35	□□□□□ -0.27
TIR1	YER011W	YHB1	P39676	399 aa	Known RBP	13.35	□□□□□ -0.27
TIR1	YER011W	UTP18	P40362	594 aa	Predicted RBP	13.35	□□□□□ -0.27
TIR1	YER011W	MAD3	P47074	515 aa		13.35	□□□□□ -0.27
TIR1	YER011W	GRS2	Q06817	618 aa		13.35	□□□□□ -0.27
TIR1	YER011W	PLB3	Q08108	686 aa		13.35	□□□□□ -0.27
TIR1	YER011W	TMA46	Q12000	345 aa	Known RBP	13.35	□□□□□ -0.27
TIR1	YER011W	RHO2	P06781	192 aa		13.34	□□□□□ -0.27
TIR1	YER011W	HSC82	P15108	705 aa	Known RBP	13.34	□□□□□ -0.27
TIR1	YER011W	SPR1	P32603	445 aa		13.34	□□□□□ -0.27
TIR1	YER011W	TFB1	P32776	642 aa		13.34	□□□□□ -0.27
TIR1	YER011W	YHR045W	P38775	560 aa		13.34	□□□□□ -0.27
TIR1	YER011W	YEL073C	P39974	107 aa		13.34	□□□□□ -0.27
TIR1	YER011W	PRM2	P40534	656 aa		13.34	□□□□□ -0.27
TIR1	YER011W	VAM6	Q07468	1049 aa		13.34	□□□□□ -0.27
TIR1	YER011W	RTT10	Q08924	1013 aa		13.34	□□□□□ -0.27
TIR1	YER011W	TFB4	Q12004	338 aa		13.34	□□□□□ -0.27
TIR1	YER011W	MCD1	Q12158	566 aa		13.34	□□□□□ -0.27
TIR1	YER011W	CDC10	P25342	322 aa	Known RBP	13.33	□□□□□ -0.28
TIR1	YER011W	ATP11	P32453	318 aa		13.33	□□□□□ -0.28
TIR1	YER011W	TIS11	P47977	285 aa		13.33	□□□□□ -0.28
TIR1	YER011W	TVP15	Q03860	143 aa		13.33	□□□□□ -0.28
TIR1	YER011W	YFT2	Q06676	274 aa		13.33	□□□□□ -0.28
TIR1	YER011W	ENT4	Q07872	247 aa		13.33	□□□□□ -0.28
TIR1	YER011W	STB3	Q12427	513 aa		13.33	□□□□□ -0.28
TIR1	YER011W	TOR2	P32600	2474 aa	Known RBP	13.33	□□□□□ -0.28
TIR1	YER011W	FUM1	P08417	488 aa	Known RBP	13.32	□□□□□ -0.28
TIR1	YER011W	NMT1	P14743	455 aa		13.32	□□□□□ -0.28

Retrieved 100 of 5,963 RNA–protein pairs in 52.3 ms