RNA–Protein interactions for RNA: YEL047C

FRD1, Transcript of Soluble fumarate reductase, yeast

Gene FRD1, Length 1,413 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRD1	YEL047C	RTT10	Q08924	1013 aa		11.33	□□□□□ -0.6
FRD1	YEL047C	APC9	Q12107	265 aa		11.33	□□□□□ -0.6
FRD1	YEL047C	NCA2	Q12374	616 aa		11.33	□□□□□ -0.6
FRD1	YEL047C	GTT2	Q12390	233 aa		11.33	□□□□□ -0.6
FRD1	YEL047C	SEM1	O94742	89 aa		11.32	□□□□□ -0.6
FRD1	YEL047C	SBP1	P10080	294 aa	Known RBP	11.32	□□□□□ -0.6
FRD1	YEL047C	VPS34	P22543	875 aa		11.32	□□□□□ -0.6
FRD1	YEL047C	RSC6	P25632	483 aa		11.32	□□□□□ -0.6
FRD1	YEL047C	TIP20	P33891	701 aa		11.32	□□□□□ -0.6
FRD1	YEL047C	LIN1	P38852	340 aa	Predicted RBP	11.32	□□□□□ -0.6
FRD1	YEL047C	YIL108W	P40483	696 aa	Known RBP	11.32	□□□□□ -0.6
FRD1	YEL047C	LIA1	P47120	325 aa	Known RBP	11.32	□□□□□ -0.6
FRD1	YEL047C	TGL2	P54857	326 aa		11.32	□□□□□ -0.6
FRD1	YEL047C	GOT1	Q03554	138 aa		11.32	□□□□□ -0.6
FRD1	YEL047C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	11.32	□□□□□ -0.6	not detected
FRD1	YEL047C	TFB4	Q12004	338 aa		11.32	□□□□□ -0.6
FRD1	YEL047C	SRO7	Q12038	1033 aa		11.32	□□□□□ -0.6
FRD1	YEL047C	YSR3	P23501	404 aa		11.31	□□□□□ -0.6
FRD1	YEL047C	PHO84	P25297	587 aa	Known RBP	11.31	□□□□□ -0.6
FRD1	YEL047C	YBR032W	P38223	100 aa		11.31	□□□□□ -0.6
FRD1	YEL047C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	11.31	□□□□□ -0.6	not detected
FRD1	YEL047C	SSN3	P39073	555 aa		11.31	□□□□□ -0.6
FRD1	YEL047C	TY4A-J	P47023	414 aa		11.31	□□□□□ -0.6
FRD1	YEL047C	NNF1	P47149	201 aa		11.31	□□□□□ -0.6
FRD1	YEL047C	TIS11	P47977	285 aa		11.31	□□□□□ -0.6
FRD1	YEL047C	ECM9	Q02202	377 aa		11.31	□□□□□ -0.6
FRD1	YEL047C	YMR155W	Q03795	547 aa		11.31	□□□□□ -0.6
FRD1	YEL047C	HPT1	Q04178	221 aa	Known RBP	11.31	□□□□□ -0.6
FRD1	YEL047C	MDY2	Q12285	212 aa		11.31	□□□□□ -0.6
FRD1	YEL047C	YOR012W	Q12351	137 aa		11.31	□□□□□ -0.6
FRD1	YEL047C	YPL247C	Q12523	523 aa		11.31	□□□□□ -0.6
FRD1	YEL047C	COX6	P00427	148 aa		11.3	□□□□□ -0.6
FRD1	YEL047C	FUM1	P08417	488 aa	Known RBP	11.3	□□□□□ -0.6
FRD1	YEL047C	MCM5	P29496	775 aa	Known RBP	11.3	□□□□□ -0.6
FRD1	YEL047C	SPR1	P32603	445 aa		11.3	□□□□□ -0.6
FRD1	YEL047C	YHR020W	P38708	688 aa	Known RBP	11.3	□□□□□ -0.6
FRD1	YEL047C	CCT6	P39079	546 aa		11.3	□□□□□ -0.6
FRD1	YEL047C	YPS6	P40583	537 aa		11.3	□□□□□ -0.6
FRD1	YEL047C	BIR1	P47134	954 aa		11.3	□□□□□ -0.6
FRD1	YEL047C	PAN2	P53010	1115 aa	Predicted RBP	11.3	□□□□□ -0.6
FRD1	YEL047C	CLD1	P53264	445 aa		11.3	□□□□□ -0.6
FRD1	YEL047C	HST3	P53687	447 aa		11.3	□□□□□ -0.6
FRD1	YEL047C	SWS2	P53937	143 aa		11.3	□□□□□ -0.6
FRD1	YEL047C	CCE1	Q03702	353 aa		11.3	□□□□□ -0.6
FRD1	YEL047C	SPO20	Q04359	397 aa		11.3	□□□□□ -0.6
FRD1	YEL047C	OMS1	Q06668	471 aa		11.3	□□□□□ -0.6
FRD1	YEL047C	KIP2	P28743	706 aa		11.29	□□□□□ -0.6
FRD1	YEL047C	ATP11	P32453	318 aa		11.29	□□□□□ -0.6
FRD1	YEL047C	YSC84	P32793	468 aa		11.29	□□□□□ -0.6
FRD1	YEL047C	YEL073C	P39974	107 aa		11.29	□□□□□ -0.6
FRD1	YEL047C	UTP18	P40362	594 aa	Predicted RBP	11.29	□□□□□ -0.6
FRD1	YEL047C	TRM82	Q03774	444 aa		11.29	□□□□□ -0.6
FRD1	YEL047C	UTP13	Q05946	817 aa	Known RBP	11.29	□□□□□ -0.6
FRD1	YEL047C	PLB3	Q08108	686 aa		11.29	□□□□□ -0.6
FRD1	YEL047C	RRN3	P36070	627 aa		11.28	□□□□□ -0.6
FRD1	YEL047C	RIM2	P38127	377 aa		11.28	□□□□□ -0.6
FRD1	YEL047C	HSE1	P38753	452 aa		11.28	□□□□□ -0.6
FRD1	YEL047C	YDR089W	P38966	869 aa		11.28	□□□□□ -0.6
FRD1	YEL047C	CIS3	P47001	227 aa		11.28	□□□□□ -0.6
FRD1	YEL047C	AIF1	P52923	378 aa		11.28	□□□□□ -0.6
FRD1	YEL047C	YMR085W	P0CF18	432 aa		11.27	□□□□□ -0.6
FRD1	YEL047C	YAR066W	P0CX18	203 aa		11.27	□□□□□ -0.6
FRD1	YEL047C	YHR214W	P0CX19	203 aa		11.27	□□□□□ -0.6
FRD1	YEL047C	TRM1	P15565	570 aa	Known RBP	11.27	□□□□□ -0.6
FRD1	YEL047C	UTH1	P36135	365 aa		11.27	□□□□□ -0.6
FRD1	YEL047C	VRP1	P37370	817 aa		11.27	□□□□□ -0.6
FRD1	YEL047C	UBP14	P38237	781 aa	Known RBP	11.27	□□□□□ -0.6
FRD1	YEL047C	FAR3	P46671	204 aa		11.27	□□□□□ -0.6
FRD1	YEL047C	SUN4	P53616	420 aa		11.27	□□□□□ -0.6
FRD1	YEL047C	PST1	Q12355	444 aa		11.27	□□□□□ -0.6
FRD1	YEL047C	ACC1	Q00955	2233 aa	Known RBP	11.27	□□□□□ -0.61
FRD1	YEL047C	CDC21	P06785	304 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	RPB4	P20433	221 aa	Predicted RBP	11.26	□□□□□ -0.61
FRD1	YEL047C	NUP120	P35729	1037 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	RPF2	P36160	344 aa	Known RBP	11.26	□□□□□ -0.61
FRD1	YEL047C	PRM2	P40534	656 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	AXL1	P40851	1208 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	ZRG17	P53735	605 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	IST1	P53843	298 aa	Predicted RBP	11.26	□□□□□ -0.61
FRD1	YEL047C	AAT1	Q01802	451 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	ALR1	Q08269	859 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	STB3	Q12427	513 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	SPE4	Q12455	300 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	SWI5	P08153	709 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	RED1	P14291	827 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	VAC17	P25591	423 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	DED81	P38707	554 aa	Known RBP	11.26	□□□□□ -0.61
FRD1	YEL047C	GCD14	P46959	383 aa	Predicted RBP	11.26	□□□□□ -0.61
FRD1	YEL047C	RMI1	Q02685	241 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	NHP10	Q03435	203 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	VAM6	Q07468	1049 aa		11.26	□□□□□ -0.61
FRD1	YEL047C	RPN8	Q08723	338 aa	Known RBP	11.26	□□□□□ -0.61
FRD1	YEL047C	SNF5	P18480	905 aa		11.25	□□□□□ -0.61
FRD1	YEL047C	MSH1	P25846	959 aa		11.25	□□□□□ -0.61
FRD1	YEL047C	SKT5	P34226	696 aa		11.25	□□□□□ -0.61
FRD1	YEL047C	UBA4	P38820	440 aa		11.25	□□□□□ -0.61
FRD1	YEL047C	DHH1	P39517	506 aa	Known RBP	11.25	□□□□□ -0.61
FRD1	YEL047C	LTP1	P40347	161 aa		11.25	□□□□□ -0.61
FRD1	YEL047C	VMA13	P41807	478 aa	Known RBP	11.25	□□□□□ -0.61
FRD1	YEL047C	YRB1	P41920	201 aa	Known RBP	11.25	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms