RNA–Protein interactions for RNA: YDR257C

RKM4, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM4, Length 1,485 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM4	YDR257C	YNL144C	P53907	740 aa		5.39	□□□□□ -1.55
RKM4	YDR257C	LUC7	Q07508	261 aa	Predicted RBP	5.39	□□□□□ -1.55
RKM4	YDR257C	FRE3	Q08905	711 aa		5.39	□□□□□ -1.55
RKM4	YDR257C	FMP40	Q08968	688 aa	Predicted RBP	5.39	□□□□□ -1.55
RKM4	YDR257C	YJR112W-A	Q3E743	109 aa		5.39	□□□□□ -1.55
RKM4	YDR257C	UTP9	P38882	575 aa	Known RBP	5.39	□□□□□ -1.55
RKM4	YDR257C	VPS41	P38959	992 aa		5.39	□□□□□ -1.55
RKM4	YDR257C	XBP1	P40489	647 aa		5.39	□□□□□ -1.55
RKM4	YDR257C	CFD1	P40558	293 aa		5.39	□□□□□ -1.55
RKM4	YDR257C	PSA1	P41940	361 aa	Known RBP	5.39	□□□□□ -1.55
RKM4	YDR257C	IRC8	P47046	822 aa		5.39	□□□□□ -1.55
RKM4	YDR257C	SGM1	P47166	707 aa		5.39	□□□□□ -1.55
RKM4	YDR257C	VID30	P53076	958 aa		5.39	□□□□□ -1.55
RKM4	YDR257C	YTP1	P53584	459 aa		5.39	□□□□□ -1.55
RKM4	YDR257C	EFM6	P53970	246 aa		5.39	□□□□□ -1.55
RKM4	YDR257C	ASI1	P54074	624 aa		5.39	□□□□□ -1.55
RKM4	YDR257C	DPB4	Q04603	196 aa	Known RBP	5.39	□□□□□ -1.55
RKM4	YDR257C	YOL159C	Q08300	171 aa		5.39	□□□□□ -1.55
RKM4	YDR257C	YPT6	Q99260	215 aa		5.39	□□□□□ -1.55
RKM4	YDR257C	GAL4	P04386	881 aa		5.38	□□□□□ -1.55
RKM4	YDR257C	YAP1	P19880	650 aa	Known RBP	5.38	□□□□□ -1.55
RKM4	YDR257C	PGS1	P25578	521 aa		5.38	□□□□□ -1.55
RKM4	YDR257C	MFT1	P33441	392 aa	Known RBP	5.38	□□□□□ -1.55
RKM4	YDR257C	TOM71	P38825	639 aa	Known RBP	5.38	□□□□□ -1.55
RKM4	YDR257C	CCT6	P39079	546 aa		5.38	□□□□□ -1.55
RKM4	YDR257C	YIL024C	P40543	189 aa		5.38	□□□□□ -1.55
RKM4	YDR257C	ECM22	Q05958	814 aa	Predicted RBP	5.38	□□□□□ -1.55
RKM4	YDR257C	ETT1	Q08421	412 aa	Known RBP	5.38	□□□□□ -1.55
RKM4	YDR257C	SSE2	P32590	693 aa	Known RBP	5.37	□□□□□ -1.55
RKM4	YDR257C	MIA40	P36046	403 aa		5.37	□□□□□ -1.55
RKM4	YDR257C	TSC10	P38342	320 aa		5.37	□□□□□ -1.55
RKM4	YDR257C	ARG3	P05150	338 aa		5.36	□□□□□ -1.55
RKM4	YDR257C	DBP8	P38719	431 aa		5.36	□□□□□ -1.55
RKM4	YDR257C	SPO22	P40511	975 aa		5.36	□□□□□ -1.55
RKM4	YDR257C	PTR3	P43606	678 aa		5.36	□□□□□ -1.55
RKM4	YDR257C	BNA3	P47039	444 aa	Known RBP	5.36	□□□□□ -1.55
RKM4	YDR257C	VPS25	P47142	202 aa		5.36	□□□□□ -1.55
RKM4	YDR257C	EMI2	Q04409	500 aa	Known RBP	5.36	□□□□□ -1.55
RKM4	YDR257C	BUD7	Q08754	746 aa		5.36	□□□□□ -1.55
RKM4	YDR257C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
RKM4	YDR257C	PUP3	P25451	205 aa	Known RBP	5.35	□□□□□ -1.55
RKM4	YDR257C	YBR144C	P34215	104 aa		5.35	□□□□□ -1.55
RKM4	YDR257C	SRO77	P38163	1010 aa		5.35	□□□□□ -1.55
RKM4	YDR257C	RFC1	P38630	861 aa	Known RBP	5.35	□□□□□ -1.55
RKM4	YDR257C	LYS20	P48570	428 aa	Known RBP	5.35	□□□□□ -1.55
RKM4	YDR257C	ERG26	P53199	349 aa	Known RBP	5.35	□□□□□ -1.55
RKM4	YDR257C	SPC19	Q03954	165 aa		5.35	□□□□□ -1.55
RKM4	YDR257C	CAC2	Q04199	468 aa		5.35	□□□□□ -1.55
RKM4	YDR257C	TEN1	Q07921	160 aa		5.35	□□□□□ -1.55
RKM4	YDR257C	CKA1	P15790	372 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	EST1	P17214	699 aa	Predicted RBP	5.34	□□□□□ -1.55
RKM4	YDR257C	PTP1	P25044	335 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	IMG1	P25626	169 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	GAC1	P28006	793 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	SEF1	P34228	1148 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	STV1	P37296	890 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	SCO2	P38072	301 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	ICS2	P38284	255 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	YPT11	P48559	417 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	TAF11	Q04226	346 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	ARP10	Q04549	284 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	YLR287C	Q05881	355 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	VPS38	Q05919	439 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	MCP2	Q06567	569 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	GRC3	Q07845	632 aa		5.34	□□□□□ -1.55
RKM4	YDR257C	ARG81	P05085	880 aa		5.33	□□□□□ -1.56
RKM4	YDR257C	KGD1	P20967	1014 aa	Known RBP	5.33	□□□□□ -1.56
RKM4	YDR257C	BOS1	P25385	244 aa		5.33	□□□□□ -1.56
RKM4	YDR257C	ALG5	P40350	334 aa		5.33	□□□□□ -1.56
RKM4	YDR257C	APT1	P49435	187 aa	Known RBP	5.33	□□□□□ -1.56
RKM4	YDR257C	ATG26	Q06321	1198 aa		5.33	□□□□□ -1.56
RKM4	YDR257C	ECM30	Q06673	1274 aa		5.33	□□□□□ -1.56
RKM4	YDR257C	POS5	Q06892	414 aa		5.33	□□□□□ -1.56
RKM4	YDR257C	RTT109	Q07794	436 aa		5.33	□□□□□ -1.56
RKM4	YDR257C	SCM3	Q12334	223 aa		5.33	□□□□□ -1.56
RKM4	YDR257C	HSH49	Q99181	213 aa	Predicted RBP	5.33	□□□□□ -1.56
RKM4	YDR257C	RPB8	P20436	146 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	SYN8	P31377	255 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	YBL055C	P34220	418 aa	Predicted RBP	5.32	□□□□□ -1.56
RKM4	YDR257C	MPE1	P35728	441 aa	Known RBP	5.32	□□□□□ -1.56
RKM4	YDR257C	UBP11	P36026	717 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	ANS1	P38832	159 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	FLO5	P38894	1075 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	VRG4	P40107	337 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	MET28	P40573	187 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	MAF1	P41910	395 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	AVL9	Q12500	764 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	SGS1	P35187	1447 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	FOB1	O13329	566 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	RED1	P14291	827 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	YKL100C	P34248	587 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	NUP133	P36161	1157 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	YEL057C	P39983	233 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	NET1	P47035	1189 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	SGF73	P53165	657 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	STP1	Q00947	519 aa		5.32	□□□□□ -1.56
RKM4	YDR257C	UTP21	Q06078	939 aa	Predicted RBP	5.32	□□□□□ -1.56
RKM4	YDR257C	MET17	P06106	444 aa		5.31	□□□□□ -1.56
RKM4	YDR257C	BUD5	P25300	642 aa	Predicted RBP	5.31	□□□□□ -1.56
RKM4	YDR257C	TIF3	P34167	436 aa	Known RBP	5.31	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms