RNA–Protein interactions for RNA: YCR054C

CTR86, Transcript of Essential protein of unknown function, yeast

Gene CTR86, Length 1,692 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR86	YCR054C	SPH1	Q06160	661 aa		4.1	□□□□□ -1.75
CTR86	YCR054C	YLH47	Q06493	454 aa		4.1	□□□□□ -1.75
CTR86	YCR054C	YPL216W	Q08964	1102 aa		4.1	□□□□□ -1.75
CTR86	YCR054C	RLM1	Q12224	676 aa		4.1	□□□□□ -1.75
CTR86	YCR054C	CEX1	Q12453	761 aa		4.1	□□□□□ -1.75
CTR86	YCR054C	HIP1	P06775	603 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	SNT1	P25357	1226 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	CDC20	P26309	610 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	HXT3	P32466	567 aa	Known RBP	4.09	□□□□□ -1.76
CTR86	YCR054C	RML2	P32611	393 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	SUR1	P33300	382 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	YBR144C	P34215	104 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	PIM1	P36775	1133 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	YBR053C	P38235	358 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	SLM4	P38247	162 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	NTC20	P38302	140 aa	Predicted RBP	4.09	□□□□□ -1.76
CTR86	YCR054C	ELO3	P40319	345 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	URB2	P47108	1174 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	RPS7B	P48164	190 aa	Known RBP	4.09	□□□□□ -1.76
CTR86	YCR054C	MSY1	P48527	492 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	SHE4	P51534	789 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	ALT2	P52892	507 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	PAN2	P53010	1115 aa	Predicted RBP	4.09	□□□□□ -1.76
CTR86	YCR054C	ARP5	P53946	755 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	YPL034W	Q03083	165 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	RBS1	Q05672	457 aa	Known RBP	4.09	□□□□□ -1.76
CTR86	YCR054C	VPS54	Q12071	889 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	YDL177C	Q12257	170 aa		4.09	□□□□□ -1.76
CTR86	YCR054C	SIR3	P06701	978 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	TRP4	P07285	380 aa	Predicted RBP	4.08	□□□□□ -1.76
CTR86	YCR054C	SOF1	P33750	489 aa	Known RBP	4.08	□□□□□ -1.76
CTR86	YCR054C	ELF1	P36053	145 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	ADH5	P38113	351 aa	Known RBP	4.08	□□□□□ -1.76
CTR86	YCR054C	YSW1	P38280	609 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	YHR131C	P38835	850 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
CTR86	YCR054C	VPS45	P38932	577 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	MRX1	P40050	688 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	OSW5	P40219	148 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	LAS21	P40367	830 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	YIL089W	P40500	205 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	CHS6	P40955	746 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	STB2	P46679	850 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	DPB11	P47027	764 aa	Predicted RBP	4.08	□□□□□ -1.76
CTR86	YCR054C	APT1	P49435	187 aa	Known RBP	4.08	□□□□□ -1.76
CTR86	YCR054C	PRO2	P54885	456 aa	Known RBP	4.08	□□□□□ -1.76
CTR86	YCR054C	SKO1	Q02100	647 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	GRX3	Q03835	250 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	PPM1	Q04081	328 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	RRP45	Q05636	305 aa	Known RBP	4.08	□□□□□ -1.76
CTR86	YCR054C	YDL086W	Q07505	273 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	CRT10	Q08226	957 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	UAF30	Q08747	228 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	MED2	Q12124	431 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	TAF3	Q12297	353 aa		4.08	□□□□□ -1.76
CTR86	YCR054C	YLR278C	Q05854	1341 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	COX1	P00401	534 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	OM45	P16547	393 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	YSP3	P25036	478 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	CNE1	P27825	502 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	IDH2	P28241	369 aa	Known RBP	4.07	□□□□□ -1.76
CTR86	YCR054C	YME1	P32795	747 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	SRB2	P34162	210 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	TIF3	P34167	436 aa	Known RBP	4.07	□□□□□ -1.76
CTR86	YCR054C	RRP1	P35178	278 aa	Predicted RBP	4.07	□□□□□ -1.76
CTR86	YCR054C	PHO11	P35842	467 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	LHS1	P36016	881 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	APL3	P38065	1025 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	PHO12	P38693	467 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	PHM8	P40025	321 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	MKT1	P40850	830 aa	Known RBP	4.07	□□□□□ -1.76
CTR86	YCR054C	SEC27	P41811	889 aa	Known RBP	4.07	□□□□□ -1.76
CTR86	YCR054C	STU2	P46675	888 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	SMC3	P47037	1230 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	YGR149W	P48236	432 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	FMS1	P50264	508 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	YGL138C	P53122	345 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	BUD17	P53727	317 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	IPI3	P53877	555 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	NSG2	P53898	299 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	RPS15	Q01855	142 aa	Known RBP	4.07	□□□□□ -1.76
CTR86	YCR054C	RBA50	Q04418	439 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	UFO1	Q04511	668 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	YDR109C	Q04585	715 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	YDL242W	Q07746	117 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	FRE3	Q08905	711 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	YDR061W	Q12298	539 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.07	□□□□□ -1.76
CTR86	YCR054C	NBL1	Q3E7Y6	73 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	AI5_ALPHA	Q9ZZX1	630 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	SGS1	P35187	1447 aa		4.07	□□□□□ -1.76
CTR86	YCR054C	AAC1	P04710	309 aa		4.06	□□□□□ -1.76
CTR86	YCR054C	LPD1	P09624	499 aa	Known RBP	4.06	□□□□□ -1.76
CTR86	YCR054C	ART10	P18634	518 aa	Known RBP	4.06	□□□□□ -1.76
CTR86	YCR054C	SRP54	P20424	541 aa	Known RBP	4.06	□□□□□ -1.76
CTR86	YCR054C	GRR1	P24814	1151 aa		4.06	□□□□□ -1.76
CTR86	YCR054C	LAC1	P28496	418 aa		4.06	□□□□□ -1.76
CTR86	YCR054C	GSH1	P32477	678 aa		4.06	□□□□□ -1.76
CTR86	YCR054C	UGP1	P32861	499 aa	Known RBP	4.06	□□□□□ -1.76
CTR86	YCR054C	HIS7	P33734	552 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms