RNA–Protein interactions for RNA: YBR041W

FAT1, Transcript of Very long chain fatty acyl-CoA synthetase and fatty acid transporter, yeast

Gene FAT1, Length 2,010 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAT1	YBR041W	SLM4	P38247	162 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	YBR225W	P38321	900 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	GND1	P38720	489 aa	Known RBP	3.75	□□□□□ -1.81
FAT1	YBR041W	CYC2	P38909	366 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	FAA2	P39518	744 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	NUP60	P39705	539 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	PDS1	P40316	373 aa	Predicted RBP	3.75	□□□□□ -1.81
FAT1	YBR041W	IMA5	P40884	581 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	OPT1	P40897	799 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	CNN1	P43618	361 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	VPS25	P47142	202 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	YJR154W	P47181	346 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	MET13	P53128	600 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	GTR2	P53290	341 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	IPI3	P53877	555 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	IBD2	P53892	351 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	MTD1	Q02046	320 aa	Known RBP	3.75	□□□□□ -1.81
FAT1	YBR041W	ECM9	Q02202	377 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	RSC4	Q02206	625 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	MMT1	Q03218	510 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	YDR132C	Q03900	495 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	GPB1	Q08886	897 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	NUS1	Q12063	375 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	YOR342C	Q12182	319 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	AHA1	Q12449	350 aa	Known RBP	3.75	□□□□□ -1.81
FAT1	YBR041W	NKP1	Q12493	238 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	SAS5	Q99314	248 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	TPK2	P06245	380 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	KGD2	P19262	463 aa	Predicted RBP	3.75	□□□□□ -1.81
FAT1	YBR041W	BUB2	P26448	306 aa	Predicted RBP	3.75	□□□□□ -1.81
FAT1	YBR041W	RPC82	P32349	654 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	PTM1	P32857	523 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	IMP3	P32899	183 aa	Predicted RBP	3.75	□□□□□ -1.81
FAT1	YBR041W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
FAT1	YBR041W	TSA1	P34760	196 aa	Known RBP	3.75	□□□□□ -1.81
FAT1	YBR041W	YBR056W	P38081	501 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	YHR131C	P38835	850 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	ECM10	P39987	644 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	UBP7	P40453	1071 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	PRM2	P40534	656 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	SPO74	P45819	413 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	BNA3	P47039	444 aa	Known RBP	3.75	□□□□□ -1.81
FAT1	YBR041W	REX2	P54964	269 aa	Known RBP	3.75	□□□□□ -1.81
FAT1	YBR041W	PRP38	Q00723	242 aa	Predicted RBP	3.75	□□□□□ -1.81
FAT1	YBR041W	NHP10	Q03435	203 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	YDR179W-A	Q03983	463 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	UAF30	Q08747	228 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	MRH1	Q12117	320 aa	Predicted RBP	3.75	□□□□□ -1.81
FAT1	YBR041W	ICT1	Q12385	394 aa		3.75	□□□□□ -1.81
FAT1	YBR041W	HEM2	P05373	342 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	SPT3	P06844	337 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	SUI3	P09064	285 aa	Known RBP	3.74	□□□□□ -1.81
FAT1	YBR041W	RPS4A	P0CX35	261 aa	Known RBP	3.74	□□□□□ -1.81
FAT1	YBR041W	RPS4B	P0CX36	261 aa	Known RBP	3.74	□□□□□ -1.81
FAT1	YBR041W	SNF4	P12904	322 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	RPB4	P20433	221 aa	Predicted RBP	3.74	□□□□□ -1.81
FAT1	YBR041W	SDH2	P21801	266 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	EMC1	P25574	760 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	SPB1	P25582	841 aa	Predicted RBP	3.74	□□□□□ -1.81
FAT1	YBR041W	YJU3	P28321	313 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	DAL1	P32375	460 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	ISF1	P32488	338 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	STE14	P32584	239 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	PEP12	P32854	288 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	RPS0A	P32905	252 aa	Known RBP	3.74	□□□□□ -1.81
FAT1	YBR041W	RPS1A	P33442	255 aa	Known RBP	3.74	□□□□□ -1.81
FAT1	YBR041W	SKT5	P34226	696 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	ROT2	P38138	954 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	YBL029W	P38201	376 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	MSC7	P38694	644 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	GOS1	P38736	223 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	YHR045W	P38775	560 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	NPT1	P39683	429 aa	Known RBP	3.74	□□□□□ -1.81
FAT1	YBR041W	MEP1	P40260	492 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	MPS3	P47069	682 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	MTR3	P48240	250 aa	Predicted RBP	3.74	□□□□□ -1.81
FAT1	YBR041W	RMR1	P53060	241 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	TIM13	P53299	105 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	PXR1	P53335	271 aa	Predicted RBP	3.74	□□□□□ -1.81
FAT1	YBR041W	DCP2	P53550	970 aa	Known RBP	3.74	□□□□□ -1.81
FAT1	YBR041W	YNL033W	P53964	284 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	YNL019C	P53975	284 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	TMA20	P89886	181 aa	Predicted RBP	3.74	□□□□□ -1.81
FAT1	YBR041W	HER2	Q03557	464 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	RAD30	Q04049	632 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	RCO1	Q04779	684 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	GMC2	Q06201	188 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	MCP2	Q06567	569 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	YLR012C	Q07927	99 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	MUM3	Q08750	479 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	UBX3	Q12229	455 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	YKL018C-A	Q3E7A7	99 aa		3.74	□□□□□ -1.81
FAT1	YBR041W	CBP2	P03874	630 aa	Predicted RBP	3.73	□□□□□ -1.81
FAT1	YBR041W	BCY1	P07278	416 aa	Known RBP	3.73	□□□□□ -1.81
FAT1	YBR041W	SEC53	P07283	254 aa	Known RBP	3.73	□□□□□ -1.81
FAT1	YBR041W	RAP1	P11938	827 aa		3.73	□□□□□ -1.81
FAT1	YBR041W	SEC63	P14906	663 aa		3.73	□□□□□ -1.81
FAT1	YBR041W	NSP1	P14907	823 aa	Known RBP	3.73	□□□□□ -1.81
FAT1	YBR041W	AMD1	P15274	810 aa	Known RBP	3.73	□□□□□ -1.81
FAT1	YBR041W	FAR1	P21268	830 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms