RNA–Protein interactions for RNA: YPL112C

PEX25, Transcript of Peripheral peroxisomal membrane peroxin, yeast

Gene PEX25, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX25	YPL112C	SAE2	P46946	345 aa		10.57	□□□□□ -0.72
PEX25	YPL112C	ARH1	P48360	493 aa		10.57	□□□□□ -0.72
PEX25	YPL112C	ARP4	P80428	489 aa		10.57	□□□□□ -0.72
PEX25	YPL112C	YMR027W	Q04371	470 aa		10.57	□□□□□ -0.72
PEX25	YPL112C	YDR109C	Q04585	715 aa		10.57	□□□□□ -0.72
PEX25	YPL112C	NUT2	Q06213	157 aa		10.57	□□□□□ -0.72
PEX25	YPL112C	VTA1	Q06263	330 aa		10.57	□□□□□ -0.72
PEX25	YPL112C	RMD5	Q12508	421 aa		10.57	□□□□□ -0.72
PEX25	YPL112C	SEM1	O94742	89 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	RPL1A	P0CX43	217 aa	Known RBP	10.56	□□□□□ -0.72
PEX25	YPL112C	RPL1B	P0CX44	217 aa	Known RBP	10.56	□□□□□ -0.72
PEX25	YPL112C	RED1	P14291	827 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	TRM1	P15565	570 aa	Known RBP	10.56	□□□□□ -0.72
PEX25	YPL112C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	10.56	□□□□□ -0.72	not detected
PEX25	YPL112C	ATP12	P22135	325 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	VAN1	P23642	535 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	KAR4	P25583	335 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	YCR099C	P25657	155 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	RPC37	P36121	282 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	YSW1	P38280	609 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	OCA5	P38738	679 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	ELO1	P39540	310 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	ALA1	P40825	983 aa	Known RBP	10.56	□□□□□ -0.72
PEX25	YPL112C	YAT1	P80235	687 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	TFB2	Q02939	513 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	CCE1	Q03702	353 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	ADE13	Q05911	482 aa	Known RBP	10.56	□□□□□ -0.72
PEX25	YPL112C	PLB3	Q08108	686 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	STB3	Q12427	513 aa		10.56	□□□□□ -0.72
PEX25	YPL112C	TEL1	P38110	2787 aa		10.55	□□□□□ -0.72
PEX25	YPL112C	CDC8	P00572	216 aa		10.55	□□□□□ -0.72
PEX25	YPL112C	RAD1	P06777	1100 aa		10.55	□□□□□ -0.72
PEX25	YPL112C	HEM15	P16622	393 aa		10.55	□□□□□ -0.72
PEX25	YPL112C	RDS2	P19541	446 aa	Known RBP	10.55	□□□□□ -0.72
PEX25	YPL112C	TOM20	P35180	183 aa		10.55	□□□□□ -0.72
PEX25	YPL112C	LSM5	P40089	93 aa	Known RBP	10.55	□□□□□ -0.72
PEX25	YPL112C	FET5	P43561	622 aa		10.55	□□□□□ -0.72
PEX25	YPL112C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	10.55	□□□□□ -0.72	not detected
PEX25	YPL112C	CDC123	Q05791	360 aa		10.55	□□□□□ -0.72
PEX25	YPL112C	NUR1	Q12066	484 aa		10.55	□□□□□ -0.72
PEX25	YPL112C	YBL029C-A	Q3E756	94 aa		10.55	□□□□□ -0.72
PEX25	YPL112C	PHO84	P25297	587 aa	Known RBP	10.54	□□□□□ -0.72
PEX25	YPL112C	GUT2	P32191	649 aa		10.54	□□□□□ -0.72
PEX25	YPL112C	YHI9	P38765	294 aa		10.54	□□□□□ -0.72
PEX25	YPL112C	HST2	P53686	357 aa		10.54	□□□□□ -0.72
PEX25	YPL112C	PNP1	Q05788	311 aa		10.54	□□□□□ -0.72
PEX25	YPL112C	BLS1	Q06071	122 aa		10.54	□□□□□ -0.72
PEX25	YPL112C	YOL036W	Q08206	761 aa		10.54	□□□□□ -0.72
PEX25	YPL112C	ALR1	Q08269	859 aa		10.54	□□□□□ -0.72
PEX25	YPL112C	WSC3	Q12215	556 aa		10.54	□□□□□ -0.72
PEX25	YPL112C	GTT2	Q12390	233 aa		10.54	□□□□□ -0.72
PEX25	YPL112C	GPA2	P10823	449 aa		10.53	□□□□□ -0.72
PEX25	YPL112C	SFP1	P32432	683 aa		10.53	□□□□□ -0.72
PEX25	YPL112C	MF(ALPHA)2	P32435	120 aa		10.53	□□□□□ -0.72
PEX25	YPL112C	TFC3	P34111	1160 aa		10.53	□□□□□ -0.72
PEX25	YPL112C	NUP85	P46673	744 aa		10.53	□□□□□ -0.72
PEX25	YPL112C	BNA5	Q05979	453 aa		10.53	□□□□□ -0.72
PEX25	YPL112C	SYT1	Q06836	1226 aa		10.53	□□□□□ -0.72
PEX25	YPL112C	NOP6	Q07623	225 aa	Known RBP	10.53	□□□□□ -0.72
PEX25	YPL112C	ILS1	P09436	1072 aa	Known RBP	10.52	□□□□□ -0.73
PEX25	YPL112C	SCL1	P21243	252 aa	Known RBP	10.52	□□□□□ -0.73
PEX25	YPL112C	PPH21	P23594	369 aa		10.52	□□□□□ -0.73
PEX25	YPL112C	LAS1	P36146	502 aa	Predicted RBP	10.52	□□□□□ -0.73
PEX25	YPL112C	SPP381	P38282	291 aa	Predicted RBP	10.52	□□□□□ -0.73
PEX25	YPL112C	ZIM17	P42844	174 aa		10.52	□□□□□ -0.73
PEX25	YPL112C	TY4A-J	P47023	414 aa		10.52	□□□□□ -0.73
PEX25	YPL112C	KTR5	P53966	522 aa	Predicted RBP	10.52	□□□□□ -0.73
PEX25	YPL112C	RSC2	Q06488	889 aa		10.52	□□□□□ -0.73
PEX25	YPL112C	NUS1	Q12063	375 aa		10.52	□□□□□ -0.73
PEX25	YPL112C	VPS34	P22543	875 aa		10.51	□□□□□ -0.73
PEX25	YPL112C	YSR3	P23501	404 aa		10.51	□□□□□ -0.73
PEX25	YPL112C	PHO3	P24031	467 aa		10.51	□□□□□ -0.73
PEX25	YPL112C	MSH1	P25846	959 aa		10.51	□□□□□ -0.73
PEX25	YPL112C	DED81	P38707	554 aa	Known RBP	10.51	□□□□□ -0.73
PEX25	YPL112C	VNX1	P42839	908 aa		10.51	□□□□□ -0.73
PEX25	YPL112C	YJL107C	P42947	387 aa		10.51	□□□□□ -0.73
PEX25	YPL112C	NNF1	P47149	201 aa		10.51	□□□□□ -0.73
PEX25	YPL112C	HXT16	P47185	567 aa		10.51	□□□□□ -0.73
PEX25	YPL112C	ZRG17	P53735	605 aa		10.51	□□□□□ -0.73
PEX25	YPL112C	HXT15	P54854	567 aa		10.51	□□□□□ -0.73
PEX25	YPL112C	NAM8	Q00539	523 aa	Known RBP	10.51	□□□□□ -0.73
PEX25	YPL112C	YLR456W	Q06199	204 aa		10.51	□□□□□ -0.73
PEX25	YPL112C	YOR012W	Q12351	137 aa		10.51	□□□□□ -0.73
PEX25	YPL112C	RPO26	P20435	155 aa		10.5	□□□□□ -0.73
PEX25	YPL112C	AMS1	P22855	1083 aa		10.5	□□□□□ -0.73
PEX25	YPL112C	RRP1	P35178	278 aa	Predicted RBP	10.5	□□□□□ -0.73
PEX25	YPL112C	SSN3	P39073	555 aa		10.5	□□□□□ -0.73
PEX25	YPL112C	YEL073C	P39974	107 aa		10.5	□□□□□ -0.73
PEX25	YPL112C	NRM1	P53718	249 aa		10.5	□□□□□ -0.73
PEX25	YPL112C	SHR3	Q02774	210 aa		10.5	□□□□□ -0.73
PEX25	YPL112C	RSC3	Q06639	885 aa		10.5	□□□□□ -0.73
PEX25	YPL112C	POL2	P21951	2222 aa	Known RBP	10.49	□□□□□ -0.73
PEX25	YPL112C	RSC6	P25632	483 aa		10.49	□□□□□ -0.73
PEX25	YPL112C	CWP1	P28319	239 aa		10.49	□□□□□ -0.73
PEX25	YPL112C	TIP20	P33891	701 aa		10.49	□□□□□ -0.73
PEX25	YPL112C	PIM1	P36775	1133 aa		10.49	□□□□□ -0.73
PEX25	YPL112C	CCT8	P47079	568 aa	Known RBP	10.49	□□□□□ -0.73
PEX25	YPL112C	ZIP2	P53061	704 aa		10.49	□□□□□ -0.73
PEX25	YPL112C	PFA4	Q12006	378 aa		10.49	□□□□□ -0.73
PEX25	YPL112C	STE2	D6VTK4	431 aa		10.48	□□□□□ -0.73

Retrieved 100 of 5,963 RNA–protein pairs in 68.4 ms