RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W RSC6P25632 483 aa2.01□□□□□ -2.09
HER1YOR227W SFA1P32771 386 aa2.01□□□□□ -2.09
HER1YOR227W CRG1P38892 291 aaRIP-Chip data2.01□□□□□ -2.09not detected
HER1YOR227W NEO1P40527 1151 aa2.01□□□□□ -2.09
HER1YOR227W MKT1P40850 830 aaKnown RBP2.01□□□□□ -2.09
HER1YOR227W CEP3P40969 608 aa2.01□□□□□ -2.09
HER1YOR227W PIB2P53191 635 aa2.01□□□□□ -2.09
HER1YOR227W TY1A-DR2Q03964 440 aaKnown RBP2.01□□□□□ -2.09
HER1YOR227W PEX19Q07418 342 aa2.01□□□□□ -2.09
HER1YOR227W ERP3Q12403 225 aa2.01□□□□□ -2.09
HER1YOR227W YPT6Q99260 215 aa2.01□□□□□ -2.09
HER1YOR227W CDC24P11433 854 aaPredicted RBP2□□□□□ -2.09
HER1YOR227W MDH1P17505 334 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
HER1YOR227W PRE8P23639 250 aa2□□□□□ -2.09
HER1YOR227W OCA4P25366 362 aa2□□□□□ -2.09
HER1YOR227W YCR051WP25631 222 aa2□□□□□ -2.09
HER1YOR227W AAP1P37898 856 aaKnown RBP2□□□□□ -2.09
HER1YOR227W MMS4P38257 691 aa2□□□□□ -2.09
HER1YOR227W PPE1P38796 400 aa2□□□□□ -2.09
HER1YOR227W JHD1P40034 492 aa2□□□□□ -2.09
HER1YOR227W YNL195CP40168 261 aa2□□□□□ -2.09
HER1YOR227W UBP7P40453 1071 aa2□□□□□ -2.09
HER1YOR227W CCT7P42943 550 aaKnown RBP2□□□□□ -2.09
HER1YOR227W GLO1P50107 326 aa2□□□□□ -2.09
HER1YOR227W SCS3P53012 380 aa2□□□□□ -2.09
HER1YOR227W LCL3P53153 274 aa2□□□□□ -2.09
HER1YOR227W YGL036WP53185 909 aaPredicted RBP2□□□□□ -2.09
HER1YOR227W CUL3P53202 744 aa2□□□□□ -2.09
HER1YOR227W ART5P53244 586 aaKnown RBP2□□□□□ -2.09
HER1YOR227W SOL4P53315 255 aa2□□□□□ -2.09
HER1YOR227W EFR3Q03653 782 aaKnown RBP2□□□□□ -2.09
HER1YOR227W MGR3Q04472 501 aa2□□□□□ -2.09
HER1YOR227W APL4Q12028 832 aa2□□□□□ -2.09
HER1YOR227W PRS5Q12265 496 aaKnown RBP2□□□□□ -2.09
HER1YOR227W MDY2Q12285 212 aa2□□□□□ -2.09
HER1YOR227W SUT2Q12286 268 aa2□□□□□ -2.09
HER1YOR227W ZRT2Q12436 422 aa2□□□□□ -2.09
HER1YOR227W CBP1P07252 654 aa2□□□□□ -2.09
HER1YOR227W SEC53P07283 254 aaKnown RBP2□□□□□ -2.09
HER1YOR227W COQ1P18900 473 aa2□□□□□ -2.09
HER1YOR227W ERG6P25087 383 aaKnown RBP2□□□□□ -2.09
HER1YOR227W RPN2P32565 945 aaKnown RBP2□□□□□ -2.09
HER1YOR227W PXL1P36166 706 aa2□□□□□ -2.09
HER1YOR227W YBR139WP38109 508 aa2□□□□□ -2.09
HER1YOR227W SLZ1P40167 298 aa2□□□□□ -2.09
HER1YOR227W LOC1P43586 204 aaPredicted RBP2□□□□□ -2.09
HER1YOR227W SOK2P53438 785 aaPredicted RBP2□□□□□ -2.09
HER1YOR227W SLU7Q02775 382 aaKnown RBP2□□□□□ -2.09
HER1YOR227W RRN5Q02983 363 aa2□□□□□ -2.09
HER1YOR227W TRS31Q03337 283 aa2□□□□□ -2.09
HER1YOR227W PPN1Q04119 674 aa2□□□□□ -2.09
HER1YOR227W VPS20Q04272 221 aa2□□□□□ -2.09
HER1YOR227W YEH1Q07804 573 aa2□□□□□ -2.09
HER1YOR227W YLR358CO13565 187 aa2□□□□□ -2.09
HER1YOR227W ARG80P07249 177 aa2□□□□□ -2.09
HER1YOR227W CAD1P24813 409 aaKnown RBP2□□□□□ -2.09
HER1YOR227W SPS22P25380 463 aa2□□□□□ -2.09
HER1YOR227W PRE2P30656 287 aaKnown RBP2□□□□□ -2.09
HER1YOR227W AFG1P32317 509 aa2□□□□□ -2.09
HER1YOR227W SEC66P33754 206 aa2□□□□□ -2.09
HER1YOR227W ALY1P36117 915 aa2□□□□□ -2.09
HER1YOR227W DAD2P36162 133 aa2□□□□□ -2.09
HER1YOR227W PRE3P38624 215 aa2□□□□□ -2.09
HER1YOR227W MLH1P38920 769 aa2□□□□□ -2.09
HER1YOR227W CEM1P39525 442 aa2□□□□□ -2.09
HER1YOR227W YER034WP40022 185 aaKnown RBP2□□□□□ -2.09
HER1YOR227W YIR007WP40566 764 aa2□□□□□ -2.09
HER1YOR227W ORC4P54791 529 aa2□□□□□ -2.09
HER1YOR227W REX2P54964 269 aaKnown RBP2□□□□□ -2.09
HER1YOR227W SDH1Q00711 640 aa2□□□□□ -2.09
HER1YOR227W GAD1Q04792 585 aa2□□□□□ -2.09
HER1YOR227W YLR456WQ06199 204 aa2□□□□□ -2.09
HER1YOR227W BUD7Q08754 746 aa2□□□□□ -2.09
HER1YOR227W VPS54Q12071 889 aa2□□□□□ -2.09
HER1YOR227W SWT1Q12104 458 aa2□□□□□ -2.09
HER1YOR227W RTC5Q12108 567 aaKnown RBP2□□□□□ -2.09
HER1YOR227W UBX3Q12229 455 aa2□□□□□ -2.09
HER1YOR227W SKM1Q12469 655 aa2□□□□□ -2.09
HER1YOR227W HMG2P12684 1045 aa1.99□□□□□ -2.09
HER1YOR227W DIT1P21623 536 aa1.99□□□□□ -2.09
HER1YOR227W NAR1P23503 491 aaKnown RBP1.99□□□□□ -2.09
HER1YOR227W YUR1P26725 428 aa1.99□□□□□ -2.09
HER1YOR227W ARC19P33204 171 aaKnown RBP1.99□□□□□ -2.09
HER1YOR227W FTR1P40088 404 aa1.99□□□□□ -2.09
HER1YOR227W ELO3P40319 345 aa1.99□□□□□ -2.09
HER1YOR227W LRO1P40345 661 aa1.99□□□□□ -2.09
HER1YOR227W ATF1P40353 525 aa1.99□□□□□ -2.09
HER1YOR227W INA22P40576 216 aa1.99□□□□□ -2.09
HER1YOR227W MET12P46151 657 aa1.99□□□□□ -2.09
HER1YOR227W SMC3P47037 1230 aa1.99□□□□□ -2.09
HER1YOR227W TAF4P50105 388 aa1.99□□□□□ -2.09
HER1YOR227W COS12P53053 380 aa1.99□□□□□ -2.09
HER1YOR227W MLC1P53141 149 aa1.99□□□□□ -2.09
HER1YOR227W CUR1Q06469 252 aa1.99□□□□□ -2.09
HER1YOR227W ARR3Q06598 404 aa1.99□□□□□ -2.09
HER1YOR227W CDA1Q06702 301 aa1.99□□□□□ -2.09
HER1YOR227W TMA16Q08687 178 aa1.99□□□□□ -2.09
HER1YOR227W UPC2Q12151 913 aa1.99□□□□□ -2.09
HER1YOR227W AVL9Q12500 764 aa1.99□□□□□ -2.09
HER1YOR227W YOR111WQ99210 232 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 50 ms