RNA–Protein interactions for RNA: YOL067C

RTG1, Transcript of Transcription factor (bHLH) involved in interorganelle communication, yeast

Gene RTG1, Length 534 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG1	YOL067C	GPR1	Q12361	961 aa		11.24	□□□□□ -0.61
RTG1	YOL067C	SEC39	Q12745	709 aa		11.24	□□□□□ -0.61
RTG1	YOL067C	CYR1	P08678	2026 aa	Known RBP	11.23	□□□□□ -0.61
RTG1	YOL067C	MRP21	P38175	177 aa		11.23	□□□□□ -0.61
RTG1	YOL067C	DPH1	P40487	425 aa	Known RBP	11.23	□□□□□ -0.61
RTG1	YOL067C	CWC22	P53333	577 aa	Known RBP	11.23	□□□□□ -0.61
RTG1	YOL067C	ARE2	P53629	642 aa	Known RBP	11.23	□□□□□ -0.61
RTG1	YOL067C	BOP3	P53958	396 aa		11.23	□□□□□ -0.61
RTG1	YOL067C	ROT1	Q03691	256 aa		11.23	□□□□□ -0.61
RTG1	YOL067C	VHS1	Q03785	461 aa		11.23	□□□□□ -0.61
RTG1	YOL067C	BMT6	Q12291	365 aa		11.23	□□□□□ -0.61
RTG1	YOL067C	FUM1	P08417	488 aa	Known RBP	11.22	□□□□□ -0.61
RTG1	YOL067C	IMA3	P0CW40	589 aa		11.22	□□□□□ -0.61
RTG1	YOL067C	IMA4	P0CW41	589 aa		11.22	□□□□□ -0.61
RTG1	YOL067C	NSP1	P14907	823 aa	Known RBP	11.22	□□□□□ -0.61
RTG1	YOL067C	RSC6	P25632	483 aa		11.22	□□□□□ -0.61
RTG1	YOL067C	YCR099C	P25657	155 aa		11.22	□□□□□ -0.61
RTG1	YOL067C	MGT1	P26188	188 aa		11.22	□□□□□ -0.61
RTG1	YOL067C	PET309	P32522	965 aa	Predicted RBP	11.22	□□□□□ -0.61
RTG1	YOL067C	CDC13	P32797	924 aa	Known RBP	11.22	□□□□□ -0.61
RTG1	YOL067C	YHL008C	P38750	627 aa		11.22	□□□□□ -0.61
RTG1	YOL067C	YHR182W	P38870	785 aa		11.22	□□□□□ -0.61
RTG1	YOL067C	LYS1	P38998	373 aa	RIP-Chip data	11.22	□□□□□ -0.61	not detected
RTG1	YOL067C	SPG5	P42933	373 aa		11.22	□□□□□ -0.61
RTG1	YOL067C	YGR266W	P53326	701 aa		11.22	□□□□□ -0.61
RTG1	YOL067C	IMA2	Q08295	589 aa		11.22	□□□□□ -0.61
RTG1	YOL067C	ZRT2	Q12436	422 aa		11.22	□□□□□ -0.61
RTG1	YOL067C	MSB1	P21339	1137 aa	Known RBP	11.21	□□□□□ -0.61
RTG1	YOL067C	CDC20	P26309	610 aa		11.21	□□□□□ -0.61
RTG1	YOL067C	STB6	P36085	766 aa		11.21	□□□□□ -0.61
RTG1	YOL067C	MRPL37	P36532	105 aa		11.21	□□□□□ -0.61
RTG1	YOL067C	VHC1	P38329	1120 aa		11.21	□□□□□ -0.61
RTG1	YOL067C	LRO1	P40345	661 aa		11.21	□□□□□ -0.61
RTG1	YOL067C	PXA1	P41909	870 aa		11.21	□□□□□ -0.61
RTG1	YOL067C	YJL107C	P42947	387 aa		11.21	□□□□□ -0.61
RTG1	YOL067C	APT1	P49435	187 aa	Known RBP	11.21	□□□□□ -0.61
RTG1	YOL067C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	11.21	□□□□□ -0.61	RIP-Chip
RTG1	YOL067C	PET117	Q02771	107 aa		11.21	□□□□□ -0.61
RTG1	YOL067C	ECI1	Q05871	280 aa		11.21	□□□□□ -0.61
RTG1	YOL067C	VTA1	Q06263	330 aa		11.21	□□□□□ -0.61
RTG1	YOL067C	ADY3	Q07732	790 aa		11.21	□□□□□ -0.61
RTG1	YOL067C	YCR006C	P25350	157 aa		11.2	□□□□□ -0.62
RTG1	YOL067C	SMI1	P32566	505 aa		11.2	□□□□□ -0.62
RTG1	YOL067C	DOM34	P33309	386 aa		11.2	□□□□□ -0.62
RTG1	YOL067C	EMC3	P36039	253 aa		11.2	□□□□□ -0.62
RTG1	YOL067C	MAK5	P38112	773 aa	Predicted RBP	11.2	□□□□□ -0.62
RTG1	YOL067C	MMS21	P38632	267 aa		11.2	□□□□□ -0.62
RTG1	YOL067C	ALR2	P43553	858 aa		11.2	□□□□□ -0.62
RTG1	YOL067C	RPC17	P47076	161 aa		11.2	□□□□□ -0.62
RTG1	YOL067C	ZRG17	P53735	605 aa		11.2	□□□□□ -0.62
RTG1	YOL067C	CCE1	Q03702	353 aa		11.2	□□□□□ -0.62
RTG1	YOL067C	CTK1	Q03957	528 aa	Known RBP	11.2	□□□□□ -0.62
RTG1	YOL067C	NHX1	Q04121	633 aa		11.2	□□□□□ -0.62
RTG1	YOL067C	CDC73	Q06697	393 aa		11.2	□□□□□ -0.62
RTG1	YOL067C	GUP2	Q08929	609 aa		11.2	□□□□□ -0.62
RTG1	YOL067C	ACM1	Q08981	209 aa		11.2	□□□□□ -0.62
RTG1	YOL067C	GLE1	Q12315	538 aa		11.2	□□□□□ -0.62
RTG1	YOL067C	RRP12	Q12754	1228 aa	Known RBP	11.2	□□□□□ -0.62
RTG1	YOL067C	SEC15	P22224	910 aa		11.19	□□□□□ -0.62
RTG1	YOL067C	MSH1	P25846	959 aa		11.19	□□□□□ -0.62
RTG1	YOL067C	GUT2	P32191	649 aa		11.19	□□□□□ -0.62
RTG1	YOL067C	SKN1	P33336	771 aa		11.19	□□□□□ -0.62
RTG1	YOL067C	DEF1	P35732	738 aa	Known RBP	11.19	□□□□□ -0.62
RTG1	YOL067C	POP4	P38336	279 aa		11.19	□□□□□ -0.62
RTG1	YOL067C	CAJ1	P39101	391 aa		11.19	□□□□□ -0.62
RTG1	YOL067C	DIC1	Q06143	298 aa		11.19	□□□□□ -0.62
RTG1	YOL067C	NUT2	Q06213	157 aa		11.19	□□□□□ -0.62
RTG1	YOL067C	RSC3	Q06639	885 aa		11.19	□□□□□ -0.62
RTG1	YOL067C	UPC2	Q12151	913 aa		11.19	□□□□□ -0.62
RTG1	YOL067C	FRE7	Q12333	620 aa		11.19	□□□□□ -0.62
RTG1	YOL067C	HRP1	Q99383	534 aa	Known RBP	11.19	□□□□□ -0.62
RTG1	YOL067C	SEM1	O94742	89 aa		11.18	□□□□□ -0.62
RTG1	YOL067C	PET123	P17558	318 aa		11.18	□□□□□ -0.62
RTG1	YOL067C	HOP1	P20050	605 aa		11.18	□□□□□ -0.62
RTG1	YOL067C	PHO3	P24031	467 aa		11.18	□□□□□ -0.62
RTG1	YOL067C	ATP11	P32453	318 aa		11.18	□□□□□ -0.62
RTG1	YOL067C	GDA1	P32621	518 aa		11.18	□□□□□ -0.62
RTG1	YOL067C	URH1	Q04179	340 aa		11.18	□□□□□ -0.62
RTG1	YOL067C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	11.17	□□□□□ -0.62	not detected
RTG1	YOL067C	PEX5	P35056	612 aa		11.17	□□□□□ -0.62
RTG1	YOL067C	SQT1	P35184	431 aa		11.17	□□□□□ -0.62
RTG1	YOL067C	NTR2	P36118	322 aa	Predicted RBP	11.17	□□□□□ -0.62
RTG1	YOL067C	SSN3	P39073	555 aa		11.17	□□□□□ -0.62
RTG1	YOL067C	RIM21	P48565	533 aa		11.17	□□□□□ -0.62
RTG1	YOL067C	PEX8	P53248	589 aa		11.17	□□□□□ -0.62
RTG1	YOL067C	AAT1	Q01802	451 aa		11.17	□□□□□ -0.62
RTG1	YOL067C	TFB2	Q02939	513 aa		11.17	□□□□□ -0.62
RTG1	YOL067C	SIZ1	Q04195	904 aa		11.17	□□□□□ -0.62
RTG1	YOL067C	ENT2	Q05785	613 aa		11.17	□□□□□ -0.62
RTG1	YOL067C	BLS1	Q06071	122 aa		11.17	□□□□□ -0.62
RTG1	YOL067C	GTT2	Q12390	233 aa		11.17	□□□□□ -0.62
RTG1	YOL067C	TRA1	P38811	3744 aa		11.17	□□□□□ -0.62
RTG1	YOL067C	INO1	P11986	533 aa		11.16	□□□□□ -0.62
RTG1	YOL067C	UBA4	P38820	440 aa		11.16	□□□□□ -0.62
RTG1	YOL067C	GIM4	P40005	111 aa	Known RBP	11.16	□□□□□ -0.62
RTG1	YOL067C	UTP18	P40362	594 aa	Predicted RBP	11.16	□□□□□ -0.62
RTG1	YOL067C	NNF1	P47149	201 aa		11.16	□□□□□ -0.62
RTG1	YOL067C	SGF73	P53165	657 aa		11.16	□□□□□ -0.62
RTG1	YOL067C	RHO3	Q00245	231 aa	Known RBP	11.16	□□□□□ -0.62
RTG1	YOL067C	SML1	Q04964	104 aa		11.16	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 247.8 ms