RNA–Protein interactions for RNA: YMR235C

RNA1, Transcript of GTPase activating protein (GAP) for Gsp1p, yeast

Gene RNA1, Length 1,224 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNA1	YMR235C	YBR085C-A	O43137	85 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	PDE1	P22434	369 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	PRP28	P23394	588 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	SNT1	P25357	1226 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	BUD14	P27637	709 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	MSS1	P32559	526 aa	Predicted RBP	4.38	□□□□□ -1.71
RNA1	YMR235C	YEL043W	P32618	956 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	LAS1	P36146	502 aa	Predicted RBP	4.38	□□□□□ -1.71
RNA1	YMR235C	AGP2	P38090	596 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	GND1	P38720	489 aa	Known RBP	4.38	□□□□□ -1.71
RNA1	YMR235C	PCL5	P38794	229 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	NUP60	P39705	539 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
RNA1	YMR235C	CTK2	P46962	323 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	LYS4	P49367	693 aa	Predicted RBP	4.38	□□□□□ -1.71
RNA1	YMR235C	LCL3	P53153	274 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	SNF12	P53628	566 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	LGE1	Q02796	332 aa	Known RBP	4.38	□□□□□ -1.71
RNA1	YMR235C	RGC1	Q06108	1083 aa	Known RBP	4.38	□□□□□ -1.71
RNA1	YMR235C	GPN2	Q08726	347 aa	Predicted RBP	4.38	□□□□□ -1.71
RNA1	YMR235C	APL4	Q12028	832 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	CHS5	Q12114	671 aa	Known RBP	4.38	□□□□□ -1.71
RNA1	YMR235C	AVL9	Q12500	764 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	AFI1	Q99222	893 aa		4.38	□□□□□ -1.71
RNA1	YMR235C	CLC1	P17891	233 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	SUI2	P20459	304 aa	Known RBP	4.37	□□□□□ -1.71
RNA1	YMR235C	ERV1	P27882	189 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	SEC66	P33754	206 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	LTV1	P34078	463 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	MRPL7	P36519	292 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	SDH8	P38345	138 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	PCL7	P40186	285 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	DOT5	P40553	215 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	CAK1	P43568	368 aa	Predicted RBP	4.37	□□□□□ -1.71
RNA1	YMR235C	DLD2	P46681	530 aa	Known RBP	4.37	□□□□□ -1.71
RNA1	YMR235C	PET130	P47065	347 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	VID30	P53076	958 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	SPC98	P53540	846 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	BOP3	P53958	396 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	ADA2	Q02336	434 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	USA1	Q03714	838 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	MGR3	Q04472	501 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	DPB4	Q04603	196 aa	Known RBP	4.37	□□□□□ -1.71
RNA1	YMR235C	SOV1	Q04748	898 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	MMR1	Q06324	491 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	LUC7	Q07508	261 aa	Predicted RBP	4.37	□□□□□ -1.71
RNA1	YMR235C	MLH2	Q07980	695 aa		4.37	□□□□□ -1.71
RNA1	YMR235C	RPN5	Q12250	445 aa	Known RBP	4.37	□□□□□ -1.71
RNA1	YMR235C	ARD1	P07347	238 aa	Predicted RBP	4.36	□□□□□ -1.71
RNA1	YMR235C	RPC40	P07703	335 aa	Known RBP	4.36	□□□□□ -1.71
RNA1	YMR235C	CDC43	P18898	376 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	CDC15	P27636	974 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	TFB1	P32776	642 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	GYP6	P32806	458 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	MRE11	P32829	692 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	CMC1	P36064	111 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	DAD2	P36162	133 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	ADH5	P38113	351 aa	Known RBP	4.36	□□□□□ -1.71
RNA1	YMR235C	RRT2	P38332	387 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	YHR054C	P38780	354 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	TIF4631	P39935	952 aa	Known RBP	4.36	□□□□□ -1.71
RNA1	YMR235C	CCT7	P42943	550 aa	Known RBP	4.36	□□□□□ -1.71
RNA1	YMR235C	FET5	P43561	622 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	IMO32	P53219	342 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	YGR079W	P53249	370 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	TWF1	P53250	332 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	FHN1	P53279	174 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	HST1	P53685	503 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	KAP120	Q02932	1032 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	EFR3	Q03653	782 aa	Known RBP	4.36	□□□□□ -1.71
RNA1	YMR235C	BUD22	Q04347	519 aa	Known RBP	4.36	□□□□□ -1.71
RNA1	YMR235C	VPS38	Q05919	439 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	IZH3	Q07959	543 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	IRC13	Q08630	104 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	NDJ1	Q12366	352 aa		4.36	□□□□□ -1.71
RNA1	YMR235C	RRP36	Q12481	300 aa	Predicted RBP	4.36	□□□□□ -1.71
RNA1	YMR235C	YML002W	P0CF17	737 aa		4.35	□□□□□ -1.71
RNA1	YMR235C	NTH1	P32356	751 aa		4.35	□□□□□ -1.71
RNA1	YMR235C	WBP1	P33767	430 aa	Known RBP	4.35	□□□□□ -1.71
RNA1	YMR235C	ERC1	P38767	581 aa		4.35	□□□□□ -1.71
RNA1	YMR235C	RTT105	P40063	208 aa		4.35	□□□□□ -1.71
RNA1	YMR235C	NAS2	P40555	220 aa		4.35	□□□□□ -1.71
RNA1	YMR235C	HXT14	P42833	540 aa		4.35	□□□□□ -1.71
RNA1	YMR235C	CTR1	P49573	406 aa		4.35	□□□□□ -1.71
RNA1	YMR235C	YAT1	P80235	687 aa		4.35	□□□□□ -1.71
RNA1	YMR235C	GRX3	Q03835	250 aa		4.35	□□□□□ -1.71
RNA1	YMR235C	FMP40	Q08968	688 aa	Predicted RBP	4.35	□□□□□ -1.71
RNA1	YMR235C	PSY3	Q12318	242 aa		4.35	□□□□□ -1.71
RNA1	YMR235C	CTF3	Q12748	733 aa		4.35	□□□□□ -1.71
RNA1	YMR235C	PHO84	P25297	587 aa	Known RBP	4.34	□□□□□ -1.71
RNA1	YMR235C	PRD1	P25375	712 aa		4.34	□□□□□ -1.71
RNA1	YMR235C	RIB7	P33312	244 aa		4.34	□□□□□ -1.71
RNA1	YMR235C	HIS7	P33734	552 aa	Known RBP	4.34	□□□□□ -1.71
RNA1	YMR235C	TCD2	P36101	447 aa	Known RBP	4.34	□□□□□ -1.71
RNA1	YMR235C	THI2	P38141	450 aa		4.34	□□□□□ -1.71
RNA1	YMR235C	ARO9	P38840	513 aa	Predicted RBP	4.34	□□□□□ -1.71
RNA1	YMR235C	REV7	P38927	245 aa		4.34	□□□□□ -1.71
RNA1	YMR235C	FMP52	P40008	231 aa		4.34	□□□□□ -1.71
RNA1	YMR235C	MAF1	P41910	395 aa		4.34	□□□□□ -1.71
RNA1	YMR235C	MPS3	P47069	682 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms