RNA–Protein interactions for RNA: YML005W

TRM12, Transcript of S-adenosylmethionine-dependent methyltransferase, yeast

Gene TRM12, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM12	YML005W	SMF1	P38925	575 aa		4	□□□□□ -1.77
TRM12	YML005W	PHM8	P40025	321 aa		4	□□□□□ -1.77
TRM12	YML005W	YFR020W	P43600	232 aa		4	□□□□□ -1.77
TRM12	YML005W	STR3	P53101	465 aa	Known RBP	4	□□□□□ -1.77
TRM12	YML005W	TIM44	Q01852	431 aa		4	□□□□□ -1.77
TRM12	YML005W	YLR345W	Q06137	509 aa		4	□□□□□ -1.77
TRM12	YML005W	SFI1	Q12369	946 aa		4	□□□□□ -1.77
TRM12	YML005W	ILV2	P07342	687 aa	Known RBP	3.99	□□□□□ -1.77
TRM12	YML005W	AQY1	P0CD91	305 aa		3.99	□□□□□ -1.77
TRM12	YML005W	EST1	P17214	699 aa	Predicted RBP	3.99	□□□□□ -1.77
TRM12	YML005W	AAD3	P25612	363 aa		3.99	□□□□□ -1.77
TRM12	YML005W	PTC6	P25646	442 aa		3.99	□□□□□ -1.77
TRM12	YML005W	TIF3	P34167	436 aa	Known RBP	3.99	□□□□□ -1.77
TRM12	YML005W	SAS3	P34218	831 aa		3.99	□□□□□ -1.77
TRM12	YML005W	BLI1	P35727	113 aa		3.99	□□□□□ -1.77
TRM12	YML005W	YKL050C	P35736	922 aa		3.99	□□□□□ -1.77
TRM12	YML005W	MOH1	P38191	138 aa		3.99	□□□□□ -1.77
TRM12	YML005W	EXO1	P39875	702 aa		3.99	□□□□□ -1.77
TRM12	YML005W	ROK1	P45818	564 aa	Predicted RBP	3.99	□□□□□ -1.77
TRM12	YML005W	MAK10	Q02197	733 aa		3.99	□□□□□ -1.77
TRM12	YML005W	BUD22	Q04347	519 aa	Known RBP	3.99	□□□□□ -1.77
TRM12	YML005W	LUC7	Q07508	261 aa	Predicted RBP	3.99	□□□□□ -1.77
TRM12	YML005W	RTT109	Q07794	436 aa		3.99	□□□□□ -1.77
TRM12	YML005W	LEA1	Q08963	238 aa	Predicted RBP	3.99	□□□□□ -1.77
TRM12	YML005W	GAL80	P04387	435 aa		3.98	□□□□□ -1.77
TRM12	YML005W	CHO1	P08456	276 aa		3.98	□□□□□ -1.77
TRM12	YML005W	VMA16	P23968	213 aa		3.98	□□□□□ -1.77
TRM12	YML005W	SAT4	P25333	603 aa	Known RBP	3.98	□□□□□ -1.77
TRM12	YML005W	SYN8	P31377	255 aa		3.98	□□□□□ -1.77
TRM12	YML005W	SOF1	P33750	489 aa	Known RBP	3.98	□□□□□ -1.77
TRM12	YML005W	LHS1	P36016	881 aa		3.98	□□□□□ -1.77
TRM12	YML005W	UBP11	P36026	717 aa		3.98	□□□□□ -1.77
TRM12	YML005W	AGP2	P38090	596 aa		3.98	□□□□□ -1.77
TRM12	YML005W	SRP72	P38688	640 aa	Known RBP	3.98	□□□□□ -1.77
TRM12	YML005W	AFG3	P39925	761 aa		3.98	□□□□□ -1.77
TRM12	YML005W	SAE2	P46946	345 aa		3.98	□□□□□ -1.77
TRM12	YML005W	IRC8	P47046	822 aa		3.98	□□□□□ -1.77
TRM12	YML005W	VPS73	P53142	486 aa	Known RBP	3.98	□□□□□ -1.77
TRM12	YML005W	ZDS2	P54786	942 aa		3.98	□□□□□ -1.77
TRM12	YML005W	AAT1	Q01802	451 aa		3.98	□□□□□ -1.77
TRM12	YML005W	YLR352W	Q06479	807 aa		3.98	□□□□□ -1.77
TRM12	YML005W	RIM20	Q12033	661 aa		3.98	□□□□□ -1.77
TRM12	YML005W	SUT2	Q12286	268 aa		3.98	□□□□□ -1.77
TRM12	YML005W	SMC6	Q12749	1114 aa		3.98	□□□□□ -1.77
TRM12	YML005W	HXK2	P04807	486 aa	Known RBP	3.97	□□□□□ -1.77
TRM12	YML005W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
TRM12	YML005W	MRP13	P12686	339 aa		3.97	□□□□□ -1.77
TRM12	YML005W	CDC43	P18898	376 aa		3.97	□□□□□ -1.77
TRM12	YML005W	DMC1	P25453	334 aa		3.97	□□□□□ -1.77
TRM12	YML005W	DIA4	P38705	446 aa	Predicted RBP	3.97	□□□□□ -1.77
TRM12	YML005W	ERV46	P39727	415 aa		3.97	□□□□□ -1.77
TRM12	YML005W	MRX1	P40050	688 aa		3.97	□□□□□ -1.77
TRM12	YML005W	PET130	P47065	347 aa		3.97	□□□□□ -1.77
TRM12	YML005W	DIA3	P52290	468 aa		3.97	□□□□□ -1.77
TRM12	YML005W	SGF73	P53165	657 aa		3.97	□□□□□ -1.77
TRM12	YML005W	SXM1	Q04175	944 aa	Known RBP	3.97	□□□□□ -1.77
TRM12	YML005W	VPS38	Q05919	439 aa		3.97	□□□□□ -1.77
TRM12	YML005W	ECM22	Q05958	814 aa	Predicted RBP	3.97	□□□□□ -1.77
TRM12	YML005W	MRD1	Q06106	887 aa	Known RBP	3.97	□□□□□ -1.77
TRM12	YML005W	ULA1	Q12059	462 aa		3.97	□□□□□ -1.77
TRM12	YML005W	SGS1	P35187	1447 aa		3.97	□□□□□ -1.77
TRM12	YML005W	MF(ALPHA)1	P01149	165 aa		3.96	□□□□□ -1.78
TRM12	YML005W	ILS1	P09436	1072 aa	Known RBP	3.96	□□□□□ -1.78
TRM12	YML005W	ADK2	P26364	225 aa		3.96	□□□□□ -1.78
TRM12	YML005W	DBF4	P32325	704 aa		3.96	□□□□□ -1.78
TRM12	YML005W	UGP1	P32861	499 aa	Known RBP	3.96	□□□□□ -1.78
TRM12	YML005W	PXA2	P34230	853 aa		3.96	□□□□□ -1.78
TRM12	YML005W	OAR1	P35731	278 aa		3.96	□□□□□ -1.78
TRM12	YML005W	SNU114	P36048	1008 aa	Known RBP	3.96	□□□□□ -1.78
TRM12	YML005W	TCD2	P36101	447 aa	Known RBP	3.96	□□□□□ -1.78
TRM12	YML005W	VID24	P38263	362 aa		3.96	□□□□□ -1.78
TRM12	YML005W	IMD2	P38697	523 aa	Known RBP	3.96	□□□□□ -1.78
TRM12	YML005W	ASG1	P40467	964 aa		3.96	□□□□□ -1.78
TRM12	YML005W	OPT1	P40897	799 aa		3.96	□□□□□ -1.78
TRM12	YML005W	CDC1	P40986	491 aa		3.96	□□□□□ -1.78
TRM12	YML005W	RPN11	P43588	306 aa	Known RBP	3.96	□□□□□ -1.78
TRM12	YML005W	DPB11	P47027	764 aa	Predicted RBP	3.96	□□□□□ -1.78
TRM12	YML005W	IMD4	P50094	524 aa	Known RBP	3.96	□□□□□ -1.78
TRM12	YML005W	IMD3	P50095	523 aa	Known RBP	3.96	□□□□□ -1.78
TRM12	YML005W	YML6	P51998	286 aa		3.96	□□□□□ -1.78
TRM12	YML005W	YGR066C	P53242	292 aa		3.96	□□□□□ -1.78
TRM12	YML005W	YDR239C	Q03780	787 aa		3.96	□□□□□ -1.78
TRM12	YML005W	RLM1	Q12224	676 aa		3.96	□□□□□ -1.78
TRM12	YML005W	INP53	Q12271	1107 aa		3.96	□□□□□ -1.78
TRM12	YML005W	ISN1	Q99312	450 aa		3.96	□□□□□ -1.78
TRM12	YML005W	YER145C-A	A0A023PYF4	145 aa		3.95	□□□□□ -1.78
TRM12	YML005W	HEM1	P09950	548 aa	Predicted RBP	3.95	□□□□□ -1.78
TRM12	YML005W	KRS1	P15180	591 aa	Known RBP	3.95	□□□□□ -1.78
TRM12	YML005W	MAK32	P23060	363 aa		3.95	□□□□□ -1.78
TRM12	YML005W	SWI3	P32591	825 aa		3.95	□□□□□ -1.78
TRM12	YML005W	WBP1	P33767	430 aa	Known RBP	3.95	□□□□□ -1.78
TRM12	YML005W	GCS1	P35197	352 aa		3.95	□□□□□ -1.78
TRM12	YML005W	STB6	P36085	766 aa		3.95	□□□□□ -1.78
TRM12	YML005W	CST26	P38226	397 aa		3.95	□□□□□ -1.78
TRM12	YML005W	YEL020C	P39994	560 aa		3.95	□□□□□ -1.78
TRM12	YML005W	YJL068C	P40363	299 aa		3.95	□□□□□ -1.78
TRM12	YML005W	YJL043W	P47053	257 aa		3.95	□□□□□ -1.78
TRM12	YML005W	HOS2	P53096	452 aa	Predicted RBP	3.95	□□□□□ -1.78
TRM12	YML005W	IST1	P53843	298 aa	Predicted RBP	3.95	□□□□□ -1.78
TRM12	YML005W	IPI3	P53877	555 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms