RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W SRO77P38163 1010 aa2.54□□□□□ -2
HRD3YLR207W CDS1P38221 457 aa2.54□□□□□ -2
HRD3YLR207W AIM3P38266 947 aaKnown RBP2.54□□□□□ -2
HRD3YLR207W LYS9P38999 446 aa2.54□□□□□ -2
HRD3YLR207W ARB1P40024 610 aaKnown RBP2.54□□□□□ -2
HRD3YLR207W YIL161WP40449 235 aaKnown RBP2.54□□□□□ -2
HRD3YLR207W MCM6P53091 1017 aaKnown RBP2.54□□□□□ -2
HRD3YLR207W RIM8P53179 542 aa2.54□□□□□ -2
HRD3YLR207W KIN4Q01919 800 aa2.54□□□□□ -2
HRD3YLR207W UBP16Q02863 499 aa2.54□□□□□ -2
HRD3YLR207W NGL3Q03210 505 aa2.54□□□□□ -2
HRD3YLR207W ADY4Q05955 493 aa2.54□□□□□ -2
HRD3YLR207W YLR345WQ06137 509 aa2.54□□□□□ -2
HRD3YLR207W THI3Q07471 609 aa2.54□□□□□ -2
HRD3YLR207W TMA16Q08687 178 aa2.54□□□□□ -2
HRD3YLR207W NMD4Q12129 218 aa2.54□□□□□ -2
HRD3YLR207W SOD2P00447 233 aa2.54□□□□□ -2
HRD3YLR207W GAS1P22146 559 aaKnown RBP2.54□□□□□ -2
HRD3YLR207W ERG8P24521 451 aa2.54□□□□□ -2
HRD3YLR207W CLB1P24868 471 aa2.54□□□□□ -2
HRD3YLR207W PAP1P29468 568 aaKnown RBP2.54□□□□□ -2
HRD3YLR207W ALY1P36117 915 aa2.54□□□□□ -2
HRD3YLR207W LAS1P36146 502 aaPredicted RBP2.54□□□□□ -2
HRD3YLR207W AFG3P39925 761 aa2.54□□□□□ -2
HRD3YLR207W THI6P41835 540 aa2.54□□□□□ -2
HRD3YLR207W GLO1P50107 326 aa2.54□□□□□ -2
HRD3YLR207W VPS4P52917 437 aa2.54□□□□□ -2
HRD3YLR207W PIB2P53191 635 aa2.54□□□□□ -2
HRD3YLR207W CIR2Q08822 631 aa2.54□□□□□ -2
HRD3YLR207W TCO89Q08921 799 aa2.54□□□□□ -2
HRD3YLR207W APL4Q12028 832 aa2.54□□□□□ -2
HRD3YLR207W REX3Q12090 404 aa2.54□□□□□ -2
HRD3YLR207W SUL2Q12325 893 aa2.54□□□□□ -2
HRD3YLR207W RPS19AP07280 144 aaKnown RBP2.53□□□□□ -2
HRD3YLR207W RPS19BP07281 144 aaPredicted RBP2.53□□□□□ -2
HRD3YLR207W TRP4P07285 380 aaPredicted RBP2.53□□□□□ -2
HRD3YLR207W RPB2P08518 1224 aaKnown RBP2.53□□□□□ -2
HRD3YLR207W BIK1P11709 440 aa2.53□□□□□ -2
HRD3YLR207W STE12P13574 688 aa2.53□□□□□ -2
HRD3YLR207W RRP7P25368 297 aaPredicted RBP2.53□□□□□ -2
HRD3YLR207W POL4P25615 582 aa2.53□□□□□ -2
HRD3YLR207W YCR015CP25616 317 aa2.53□□□□□ -2
HRD3YLR207W TFB1P32776 642 aa2.53□□□□□ -2
HRD3YLR207W TOD6P34219 525 aa2.53□□□□□ -2
HRD3YLR207W MAL33P38157 468 aa2.53□□□□□ -2
HRD3YLR207W TDP1P38319 544 aa2.53□□□□□ -2
HRD3YLR207W PSD1P39006 500 aa2.53□□□□□ -2
HRD3YLR207W PCL7P40186 285 aa2.53□□□□□ -2
HRD3YLR207W LRO1P40345 661 aa2.53□□□□□ -2
HRD3YLR207W BAP3P41815 604 aa2.53□□□□□ -2
HRD3YLR207W MPS3P47069 682 aa2.53□□□□□ -2
HRD3YLR207W YDL183CP48569 320 aa2.53□□□□□ -2
HRD3YLR207W MNN10P50108 393 aaKnown RBP2.53□□□□□ -2
HRD3YLR207W ASE1P50275 885 aa2.53□□□□□ -2
HRD3YLR207W CUL3P53202 744 aa2.53□□□□□ -2
HRD3YLR207W YGR054WP53235 642 aaKnown RBP2.53□□□□□ -2
HRD3YLR207W RPT4P53549 437 aaKnown RBP2.53□□□□□ -2
HRD3YLR207W MFM1Q02783 413 aa2.53□□□□□ -2
HRD3YLR207W RRP9Q06506 573 aaKnown RBP2.53□□□□□ -2
HRD3YLR207W YDL073WQ07454 984 aa2.53□□□□□ -2
HRD3YLR207W AIM39Q08223 395 aa2.53□□□□□ -2
HRD3YLR207W YPL216WQ08964 1102 aa2.53□□□□□ -2
HRD3YLR207W SNF2P22082 1703 aa2.53□□□□□ -2
HRD3YLR207W YLR358CO13565 187 aa2.53□□□□□ -2
HRD3YLR207W CPA2P03965 1118 aaKnown RBP2.53□□□□□ -2
HRD3YLR207W THR1P17423 357 aaKnown RBP2.53□□□□□ -2
HRD3YLR207W MDH1P17505 334 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
HRD3YLR207W VPS34P22543 875 aa2.53□□□□□ -2
HRD3YLR207W STE11P23561 717 aa2.53□□□□□ -2
HRD3YLR207W PUP2P32379 260 aa2.53□□□□□ -2
HRD3YLR207W RRF1P38771 230 aa2.53□□□□□ -2
HRD3YLR207W SPL2P38839 148 aa2.53□□□□□ -2
HRD3YLR207W SMF1P38925 575 aa2.53□□□□□ -2
HRD3YLR207W JHD1P40034 492 aa2.53□□□□□ -2
HRD3YLR207W YMR147WP40218 223 aaKnown RBP2.53□□□□□ -2
HRD3YLR207W CSL4P53859 292 aaPredicted RBP2.53□□□□□ -2
HRD3YLR207W MTG1Q03151 367 aaPredicted RBP2.53□□□□□ -2
HRD3YLR207W RSF1Q05043 376 aa2.53□□□□□ -2
HRD3YLR207W YSH1Q06224 779 aaPredicted RBP2.53□□□□□ -2
HRD3YLR207W AIM6Q07716 390 aa2.53□□□□□ -2
HRD3YLR207W GRX6Q12438 231 aa2.53□□□□□ -2
HRD3YLR207W YOL159C-AQ3E769 90 aa2.53□□□□□ -2
HRD3YLR207W YKL033W-AQ86ZR7 236 aa2.53□□□□□ -2
HRD3YLR207W YCR051WP25631 222 aa2.52□□□□□ -2.01
HRD3YLR207W FUB1P25659 250 aa2.52□□□□□ -2.01
HRD3YLR207W CDC15P27636 974 aa2.52□□□□□ -2.01
HRD3YLR207W CAP1P28495 268 aaKnown RBP2.52□□□□□ -2.01
HRD3YLR207W PRE2P30656 287 aaKnown RBP2.52□□□□□ -2.01
HRD3YLR207W SWH1P35845 1188 aa2.52□□□□□ -2.01
HRD3YLR207W APL3P38065 1025 aa2.52□□□□□ -2.01
HRD3YLR207W VID24P38263 362 aa2.52□□□□□ -2.01
HRD3YLR207W RGI2P40188 164 aa2.52□□□□□ -2.01
HRD3YLR207W UBC11P52492 156 aa2.52□□□□□ -2.01
HRD3YLR207W PAN2P53010 1115 aaPredicted RBP2.52□□□□□ -2.01
HRD3YLR207W LCL3P53153 274 aa2.52□□□□□ -2.01
HRD3YLR207W YGR066CP53242 292 aa2.52□□□□□ -2.01
HRD3YLR207W PIL1P53252 339 aaKnown RBP2.52□□□□□ -2.01
HRD3YLR207W HST1P53685 503 aa2.52□□□□□ -2.01
HRD3YLR207W YPL107WQ02873 248 aa2.52□□□□□ -2.01
HRD3YLR207W CRF1Q04930 467 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms