RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeast

Gene PBA1, Length 831 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBA1	YLR199C	CPR2	P23285	205 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	FEN2	P25621	512 aa	Known RBP	3.58	□□□□□ -1.84
PBA1	YLR199C	SWH1	P35845	1188 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	GND1	P38720	489 aa	Known RBP	3.58	□□□□□ -1.84
PBA1	YLR199C	RPP1	P38786	293 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	BUD16	P39988	312 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	PCL7	P40186	285 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
PBA1	YLR199C	LYS4	P49367	693 aa	Predicted RBP	3.58	□□□□□ -1.84
PBA1	YLR199C	VPS73	P53142	486 aa	Known RBP	3.58	□□□□□ -1.84
PBA1	YLR199C	YGL036W	P53185	909 aa	Predicted RBP	3.58	□□□□□ -1.84
PBA1	YLR199C	CUL3	P53202	744 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	MTL1	P53214	551 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	ARX1	Q03862	593 aa	Known RBP	3.58	□□□□□ -1.84
PBA1	YLR199C	CTK1	Q03957	528 aa	Known RBP	3.58	□□□□□ -1.84
PBA1	YLR199C	ROY1	Q04847	553 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	CRF1	Q04930	467 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	THI7	Q05998	598 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	YFT2	Q06676	274 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	PEX19	Q07418	342 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	BUD7	Q08754	746 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	SWT1	Q12104	458 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	AFI1	Q99222	893 aa		3.58	□□□□□ -1.84
PBA1	YLR199C	RPC40	P07703	335 aa	Known RBP	3.57	□□□□□ -1.84
PBA1	YLR199C	LAT1	P12695	482 aa	Known RBP	3.57	□□□□□ -1.84
PBA1	YLR199C	CAF20	P12962	161 aa	Known RBP	3.57	□□□□□ -1.84
PBA1	YLR199C	YCR061W	P25639	631 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	HEL1	P36113	551 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	SIF2	P38262	535 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	CCT6	P39079	546 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	YGR054W	P53235	642 aa	Known RBP	3.57	□□□□□ -1.84
PBA1	YLR199C	MRPS35	P53292	345 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	TOF1	P53840	1238 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	ADA2	Q02336	434 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	YDR239C	Q03780	787 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	GRX3	Q03835	250 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	DPB4	Q04603	196 aa	Known RBP	3.57	□□□□□ -1.84
PBA1	YLR199C	GTB1	Q04924	702 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	MRD1	Q06106	887 aa	Known RBP	3.57	□□□□□ -1.84
PBA1	YLR199C	MMR1	Q06324	491 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	ARO10	Q06408	635 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	APL4	Q12028	832 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	ATG29	Q12092	213 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	RPN5	Q12250	445 aa	Known RBP	3.57	□□□□□ -1.84
PBA1	YLR199C	TRM11	Q12463	433 aa		3.57	□□□□□ -1.84
PBA1	YLR199C	YBR085C-A	O43137	85 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	MET3	P08536	511 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	YML003W	P0CF16	290 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	LRE1	P25579	583 aa	Known RBP	3.56	□□□□□ -1.84
PBA1	YLR199C	SPB1	P25582	841 aa	Predicted RBP	3.56	□□□□□ -1.84
PBA1	YLR199C	MSP1	P28737	362 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	SYN8	P31377	255 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	SRB5	P32585	307 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	TFB1	P32776	642 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	GYP6	P32806	458 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	BCS1	P32839	456 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	OTU2	P38747	307 aa	Known RBP	3.56	□□□□□ -1.84
PBA1	YLR199C	ERC1	P38767	581 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	YHR054C	P38780	354 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	YHR097C	P38809	366 aa	Known RBP	3.56	□□□□□ -1.84
PBA1	YLR199C	RTT105	P40063	208 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	PIG2	P40187	538 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	ELO3	P40319	345 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	SEC24	P40482	926 aa	Known RBP	3.56	□□□□□ -1.84
PBA1	YLR199C	FET5	P43561	622 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	PET130	P47065	347 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	RFX1	P48743	811 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	SNF12	P53628	566 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	HST1	P53685	503 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	RPA49	Q01080	415 aa	Predicted RBP	3.56	□□□□□ -1.84
PBA1	YLR199C	EFR3	Q03653	782 aa	Known RBP	3.56	□□□□□ -1.84
PBA1	YLR199C	DLT1	Q04216	342 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	RQC1	Q05468	723 aa	Known RBP	3.56	□□□□□ -1.84
PBA1	YLR199C	VPS38	Q05919	439 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	RGC1	Q06108	1083 aa	Known RBP	3.56	□□□□□ -1.84
PBA1	YLR199C	YLR456W	Q06199	204 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	CTF3	Q12748	733 aa		3.56	□□□□□ -1.84
PBA1	YLR199C	GAL80	P04387	435 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	CDC43	P18898	376 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	PRP28	P23394	588 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	YIH1	P25637	258 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	RIB7	P33312	244 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	PMT1	P33775	817 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	MUP3	P38734	546 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	REV7	P38927	245 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	YJL206C	P39529	758 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	NAS2	P40555	220 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	VMA13	P41807	478 aa	Known RBP	3.55	□□□□□ -1.84
PBA1	YLR199C	MAF1	P41910	395 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	CCT7	P42943	550 aa	Known RBP	3.55	□□□□□ -1.84
PBA1	YLR199C	CTK2	P46962	323 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	YNR068C	P53754	272 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
PBA1	YLR199C	BUD22	Q04347	519 aa	Known RBP	3.55	□□□□□ -1.84
PBA1	YLR199C	ATG23	Q06671	453 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	YDL073W	Q07454	984 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	LUC7	Q07508	261 aa	Predicted RBP	3.55	□□□□□ -1.84
PBA1	YLR199C	MLH2	Q07980	695 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	YPL272C	Q08984	517 aa		3.55	□□□□□ -1.84
PBA1	YLR199C	PSY3	Q12318	242 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 38 ms