RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	SFB3	P38810	929 aa		6.68	□□□□□ -1.34
TIF1	YKR059W	CAJ1	P39101	391 aa		6.68	□□□□□ -1.34
TIF1	YKR059W	YER186C	P40101	306 aa		6.68	□□□□□ -1.34
TIF1	YKR059W	BIT61	P47041	543 aa		6.68	□□□□□ -1.34
TIF1	YKR059W	DUO1	P53168	247 aa	Known RBP	6.68	□□□□□ -1.34
TIF1	YKR059W	YNL146W	P53906	100 aa		6.68	□□□□□ -1.34
TIF1	YKR059W	SSY1	Q03770	852 aa		6.68	□□□□□ -1.34
TIF1	YKR059W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	6.68	□□□□□ -1.34	not detected
TIF1	YKR059W	PLP2	Q12017	286 aa		6.68	□□□□□ -1.34
TIF1	YKR059W	RCN2	Q12044	265 aa		6.68	□□□□□ -1.34
TIF1	YKR059W	LYS21	Q12122	440 aa	Known RBP	6.68	□□□□□ -1.34
TIF1	YKR059W	BIK1	P11709	440 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	CHS2	P14180	963 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	CKA2	P19454	339 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	OCA4	P25366	362 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	RPC53	P25441	422 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	COG1	P53079	417 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	YNR061C	P53747	219 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	VPS9	P54787	451 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	CLU1	Q03690	1277 aa	Known RBP	6.67	□□□□□ -1.34
TIF1	YKR059W	YMR155W	Q03795	547 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	GAD1	Q04792	585 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	CUR1	Q06469	252 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	VPS36	Q06696	566 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	NUS1	Q12063	375 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	UPC2	Q12151	913 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	GPR1	Q12361	961 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	POM34	Q12445	299 aa		6.67	□□□□□ -1.34
TIF1	YKR059W	ERG27	Q12452	347 aa	Known RBP	6.67	□□□□□ -1.34
TIF1	YKR059W	CYC1	P00044	109 aa	Predicted RBP	6.66	□□□□□ -1.34
TIF1	YKR059W	ADE4	P04046	510 aa	Known RBP	6.66	□□□□□ -1.34
TIF1	YKR059W	ARG3	P05150	338 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	PET122	P10355	254 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	RNR1	P21524	888 aa	Known RBP	6.66	□□□□□ -1.34
TIF1	YKR059W	PEX1	P24004	1043 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	HEL1	P36113	551 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	SIC1	P38634	284 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	LRP1	P38801	184 aa	Known RBP	6.66	□□□□□ -1.34
TIF1	YKR059W	DJP1	P40564	432 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	POL31	P46957	487 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	ZAP1	P47043	880 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	CUL3	P53202	744 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	BTN2	P53286	410 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	NCS2	P53923	493 aa	Predicted RBP	6.66	□□□□□ -1.34
TIF1	YKR059W	ADA2	Q02336	434 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	RCO1	Q04779	684 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	TPO1	Q07824	586 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	PSK2	Q08217	1101 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	THI72	Q08579	599 aa		6.66	□□□□□ -1.34
TIF1	YKR059W	BEM2	P39960	2167 aa	Known RBP	6.66	□□□□□ -1.34
TIF1	YKR059W	CDC6	P09119	513 aa		6.65	□□□□□ -1.34
TIF1	YKR059W	ALG1	P16661	449 aa		6.65	□□□□□ -1.34
TIF1	YKR059W	KGD2	P19262	463 aa	Predicted RBP	6.65	□□□□□ -1.34
TIF1	YKR059W	YHL017W	P38745	532 aa		6.65	□□□□□ -1.34
TIF1	YKR059W	FMO1	P38866	432 aa		6.65	□□□□□ -1.34
TIF1	YKR059W	YNL195C	P40168	261 aa		6.65	□□□□□ -1.34
TIF1	YKR059W	URM1	P40554	99 aa	Predicted RBP	6.65	□□□□□ -1.34
TIF1	YKR059W	LSB3	P43603	459 aa	Known RBP	6.65	□□□□□ -1.34
TIF1	YKR059W	YGR016W	P53209	190 aa		6.65	□□□□□ -1.34
TIF1	YKR059W	ARE2	P53629	642 aa	Known RBP	6.65	□□□□□ -1.34
TIF1	YKR059W	PGA2	P53903	129 aa		6.65	□□□□□ -1.34
TIF1	YKR059W	ALG11	P53954	548 aa	Known RBP	6.65	□□□□□ -1.34
TIF1	YKR059W	NRG1	Q03125	231 aa		6.65	□□□□□ -1.34
TIF1	YKR059W	TRS31	Q03337	283 aa		6.65	□□□□□ -1.34
TIF1	YKR059W	CTK1	Q03957	528 aa	Known RBP	6.65	□□□□□ -1.34
TIF1	YKR059W	NOP58	Q12499	511 aa	Known RBP	6.65	□□□□□ -1.34
TIF1	YKR059W	GAL10	P04397	699 aa		6.64	□□□□□ -1.35
TIF1	YKR059W	MET17	P06106	444 aa		6.64	□□□□□ -1.35
TIF1	YKR059W	HOM2	P13663	365 aa	Known RBP	6.64	□□□□□ -1.35
TIF1	YKR059W	COY1	P34237	679 aa		6.64	□□□□□ -1.35
TIF1	YKR059W	CTF13	P35203	478 aa		6.64	□□□□□ -1.35
TIF1	YKR059W	MMS4	P38257	691 aa		6.64	□□□□□ -1.35
TIF1	YKR059W	YHR112C	P38716	378 aa		6.64	□□□□□ -1.35
TIF1	YKR059W	EPL1	P43572	832 aa		6.64	□□□□□ -1.35
TIF1	YKR059W	SIP4	P46954	829 aa		6.64	□□□□□ -1.35
TIF1	YKR059W	AVT1	P47082	602 aa		6.64	□□□□□ -1.35
TIF1	YKR059W	RTC4	P53850	401 aa		6.64	□□□□□ -1.35
TIF1	YKR059W	ADY4	Q05955	493 aa		6.64	□□□□□ -1.35
TIF1	YKR059W	MEX67	Q99257	599 aa	Known RBP	6.64	□□□□□ -1.35
TIF1	YKR059W	ATP2	P00830	511 aa	Known RBP	6.63	□□□□□ -1.35
TIF1	YKR059W	KRR1	P25586	316 aa	Predicted RBP	6.63	□□□□□ -1.35
TIF1	YKR059W	MTC7	P32633	139 aa		6.63	□□□□□ -1.35
TIF1	YKR059W	YJL068C	P40363	299 aa		6.63	□□□□□ -1.35
TIF1	YKR059W	MET12	P46151	657 aa		6.63	□□□□□ -1.35
TIF1	YKR059W	FYV8	P46949	817 aa	Known RBP	6.63	□□□□□ -1.35
TIF1	YKR059W	GTF1	P53260	183 aa	Predicted RBP	6.63	□□□□□ -1.35
TIF1	YKR059W	OGG1	P53397	376 aa	Predicted RBP	6.63	□□□□□ -1.35
TIF1	YKR059W	SLG1	P54867	378 aa		6.63	□□□□□ -1.35
TIF1	YKR059W	CIK1	Q01649	594 aa		6.63	□□□□□ -1.35
TIF1	YKR059W	YSA1	Q01976	231 aa		6.63	□□□□□ -1.35
TIF1	YKR059W	YLH47	Q06493	454 aa		6.63	□□□□□ -1.35
TIF1	YKR059W	PEX19	Q07418	342 aa		6.63	□□□□□ -1.35
TIF1	YKR059W	GET3	Q12154	354 aa	Known RBP	6.63	□□□□□ -1.35
TIF1	YKR059W	RTN2	Q12443	393 aa		6.63	□□□□□ -1.35
TIF1	YKR059W	ECM3	Q99252	613 aa		6.63	□□□□□ -1.35
TIF1	YKR059W	TY2A-LR1	P0C2J4	438 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	TY2A-F	P0CX61	438 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	TY2A-GR2	P0CX62	438 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	CUP1-1	P0CX80	61 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	CUP1-2	P0CX81	61 aa		6.62	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms