RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W GUK1P15454 187 aaKnown RBP4.35□□□□□ -1.71
SEC28YIL076W TFC3P34111 1160 aa4.35□□□□□ -1.71
SEC28YIL076W ATG27P46989 271 aa4.35□□□□□ -1.71
SEC28YIL076W CUL3P53202 744 aa4.35□□□□□ -1.71
SEC28YIL076W BSC1Q12140 328 aa4.35□□□□□ -1.71
SEC28YIL076W TIP41Q12199 356 aa4.35□□□□□ -1.71
SEC28YIL076W BAR1P12630 587 aa4.34□□□□□ -1.71
SEC28YIL076W UBC1P21734 215 aaKnown RBP4.34□□□□□ -1.71
SEC28YIL076W PFK26P40433 827 aaKnown RBP4.34□□□□□ -1.71
SEC28YIL076W IAH1P41734 238 aa4.34□□□□□ -1.71
SEC28YIL076W UBX4P54730 416 aa4.34□□□□□ -1.71
SEC28YIL076W RTT103Q05543 409 aa4.34□□□□□ -1.71
SEC28YIL076W BLS1Q06071 122 aa4.34□□□□□ -1.71
SEC28YIL076W YLR352WQ06479 807 aa4.34□□□□□ -1.71
SEC28YIL076W RPB8P20436 146 aa4.33□□□□□ -1.72
SEC28YIL076W RAD16P31244 790 aa4.33□□□□□ -1.72
SEC28YIL076W RTS2P40962 232 aa4.33□□□□□ -1.72
SEC28YIL076W RPN11P43588 306 aaKnown RBP4.33□□□□□ -1.72
SEC28YIL076W YDR415CQ04033 374 aaPredicted RBP4.33□□□□□ -1.72
SEC28YIL076W RSF1Q05043 376 aa4.33□□□□□ -1.72
SEC28YIL076W TFC6Q06339 672 aa4.33□□□□□ -1.72
SEC28YIL076W CSR1Q06705 408 aaKnown RBP4.33□□□□□ -1.72
SEC28YIL076W YDL218WQ07629 317 aa4.33□□□□□ -1.72
SEC28YIL076W KRS1P15180 591 aaKnown RBP4.32□□□□□ -1.72
SEC28YIL076W RPN2P32565 945 aaKnown RBP4.32□□□□□ -1.72
SEC28YIL076W ESL2P36168 1195 aa4.32□□□□□ -1.72
SEC28YIL076W IST3P40565 148 aaPredicted RBP4.32□□□□□ -1.72
SEC28YIL076W FET5P43561 622 aa4.32□□□□□ -1.72
SEC28YIL076W REG1Q00816 1014 aa4.32□□□□□ -1.72
SEC28YIL076W ERG27Q12452 347 aaKnown RBP4.32□□□□□ -1.72
SEC28YIL076W VCX1Q99385 411 aa4.32□□□□□ -1.72
SEC28YIL076W NNF2P53253 936 aa4.31□□□□□ -1.72
SEC28YIL076W CRZ1P53968 678 aa4.31□□□□□ -1.72
SEC28YIL076W SCW10Q04951 389 aa4.31□□□□□ -1.72
SEC28YIL076W YOL159CQ08300 171 aa4.31□□□□□ -1.72
SEC28YIL076W PGI1P12709 554 aaKnown RBP4.3□□□□□ -1.72
SEC28YIL076W TRS65P32893 560 aa4.3□□□□□ -1.72
SEC28YIL076W YJL070CP40361 888 aa4.3□□□□□ -1.72
SEC28YIL076W YIL060WP40519 144 aa4.3□□□□□ -1.72
SEC28YIL076W CTF18P49956 741 aa4.3□□□□□ -1.72
SEC28YIL076W RRT6P53117 311 aaPredicted RBP4.3□□□□□ -1.72
SEC28YIL076W YNR061CP53747 219 aa4.3□□□□□ -1.72
SEC28YIL076W YOR019WQ99248 730 aa4.3□□□□□ -1.72
SEC28YIL076W GID7P25569 745 aa4.29□□□□□ -1.72
SEC28YIL076W YIR014WP40570 242 aa4.29□□□□□ -1.72
SEC28YIL076W SMK1P41808 388 aa4.29□□□□□ -1.72
SEC28YIL076W IST1P53843 298 aaPredicted RBP4.29□□□□□ -1.72
SEC28YIL076W CSR2Q12734 1121 aa4.29□□□□□ -1.72
SEC28YIL076W HXK2P04807 486 aaKnown RBP4.28□□□□□ -1.72
SEC28YIL076W YML002WP0CF17 737 aa4.28□□□□□ -1.72
SEC28YIL076W PMS1P14242 873 aa4.28□□□□□ -1.72
SEC28YIL076W ERG8P24521 451 aa4.28□□□□□ -1.72
SEC28YIL076W CDC15P27636 974 aa4.28□□□□□ -1.72
SEC28YIL076W RIM2P38127 377 aa4.28□□□□□ -1.72
SEC28YIL076W PSD1P39006 500 aa4.28□□□□□ -1.72
SEC28YIL076W PKP1P40530 394 aa4.28□□□□□ -1.72
SEC28YIL076W AZF1P41696 914 aa4.28□□□□□ -1.72
SEC28YIL076W YMR178WQ03219 274 aaKnown RBP4.28□□□□□ -1.72
SEC28YIL076W DAP1Q12091 152 aa4.28□□□□□ -1.72
SEC28YIL076W ATG9Q12142 997 aa4.28□□□□□ -1.72
SEC28YIL076W GLN3P18494 730 aa4.27□□□□□ -1.73
SEC28YIL076W DBF20P32328 564 aa4.27□□□□□ -1.73
SEC28YIL076W TEF4P36008 412 aaKnown RBP4.27□□□□□ -1.73
SEC28YIL076W MIA40P36046 403 aa4.27□□□□□ -1.73
SEC28YIL076W PKP2P53170 491 aa4.27□□□□□ -1.73
SEC28YIL076W NUP100Q02629 959 aa4.27□□□□□ -1.73
SEC28YIL076W PSK2Q08217 1101 aa4.27□□□□□ -1.73
SEC28YIL076W PFK2P16862 959 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
SEC28YIL076W GAC1P28006 793 aa4.26□□□□□ -1.73
SEC28YIL076W XRS2P33301 854 aa4.26□□□□□ -1.73
SEC28YIL076W PDA1P16387 420 aaKnown RBP4.25□□□□□ -1.73
SEC28YIL076W ERG7P38604 731 aa4.25□□□□□ -1.73
SEC28YIL076W PHO90P39535 881 aa4.25□□□□□ -1.73
SEC28YIL076W SEC24P40482 926 aaKnown RBP4.25□□□□□ -1.73
SEC28YIL076W VPS4P52917 437 aa4.25□□□□□ -1.73
SEC28YIL076W ADE13Q05911 482 aaKnown RBP4.25□□□□□ -1.73
SEC28YIL076W ATG26Q06321 1198 aa4.25□□□□□ -1.73
SEC28YIL076W YLR302CO13544 120 aa4.24□□□□□ -1.73
SEC28YIL076W ARP1P38696 384 aa4.24□□□□□ -1.73
SEC28YIL076W UME6P39001 836 aa4.24□□□□□ -1.73
SEC28YIL076W DHH1P39517 506 aaKnown RBP4.24□□□□□ -1.73
SEC28YIL076W RGI2P40188 164 aa4.24□□□□□ -1.73
SEC28YIL076W IME4P41833 600 aa4.24□□□□□ -1.73
SEC28YIL076W DPB11P47027 764 aaPredicted RBP4.24□□□□□ -1.73
SEC28YIL076W SMC3P47037 1230 aa4.24□□□□□ -1.73
SEC28YIL076W BNA1P47096 177 aa4.24□□□□□ -1.73
SEC28YIL076W LCB1P25045 558 aaKnown RBP4.23□□□□□ -1.73
SEC28YIL076W CNS1P33313 385 aa4.23□□□□□ -1.73
SEC28YIL076W RIC1P40395 1056 aa4.23□□□□□ -1.73
SEC28YIL076W TMA64Q04600 565 aaKnown RBP4.23□□□□□ -1.73
SEC28YIL076W RDR1Q08904 546 aa4.23□□□□□ -1.73
SEC28YIL076W TRM8Q12009 286 aa4.23□□□□□ -1.73
SEC28YIL076W NUS1Q12063 375 aa4.23□□□□□ -1.73
SEC28YIL076W INP53Q12271 1107 aa4.23□□□□□ -1.73
SEC28YIL076W PGS1P25578 521 aa4.22□□□□□ -1.73
SEC28YIL076W MCM4P30665 933 aaKnown RBP4.22□□□□□ -1.73
SEC28YIL076W ERG1P32476 496 aaKnown RBP4.22□□□□□ -1.73
SEC28YIL076W PHD1P36093 366 aa4.22□□□□□ -1.73
SEC28YIL076W MIC60P36112 540 aa4.22□□□□□ -1.73
SEC28YIL076W SAP185P40856 1058 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms