RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	PHM8	P40025	321 aa		5.32	□□□□□ -1.56
SKI8	YGL213C	LSM5	P40089	93 aa	Known RBP	5.32	□□□□□ -1.56
SKI8	YGL213C	CTK2	P46962	323 aa		5.32	□□□□□ -1.56
SKI8	YGL213C	IRC8	P47046	822 aa		5.32	□□□□□ -1.56
SKI8	YGL213C	DIA3	P52290	468 aa		5.32	□□□□□ -1.56
SKI8	YGL213C	VID30	P53076	958 aa		5.32	□□□□□ -1.56
SKI8	YGL213C	YNL058C	P53947	316 aa		5.32	□□□□□ -1.56
SKI8	YGL213C	GIS1	Q03833	894 aa		5.32	□□□□□ -1.56
SKI8	YGL213C	CYK3	Q07533	885 aa		5.32	□□□□□ -1.56
SKI8	YGL213C	YOR389W	Q08912	624 aa		5.32	□□□□□ -1.56
SKI8	YGL213C	AAD3	P25612	363 aa		5.31	□□□□□ -1.56
SKI8	YGL213C	CDC60	P26637	1090 aa	Known RBP	5.31	□□□□□ -1.56
SKI8	YGL213C	OAR1	P35731	278 aa		5.31	□□□□□ -1.56
SKI8	YGL213C	MNN2	P38069	597 aa		5.31	□□□□□ -1.56
SKI8	YGL213C	MOH1	P38191	138 aa		5.31	□□□□□ -1.56
SKI8	YGL213C	DIA4	P38705	446 aa	Predicted RBP	5.31	□□□□□ -1.56
SKI8	YGL213C	MET28	P40573	187 aa		5.31	□□□□□ -1.56
SKI8	YGL213C	MAF1	P41910	395 aa		5.31	□□□□□ -1.56
SKI8	YGL213C	TDA10	P42938	290 aa		5.31	□□□□□ -1.56
SKI8	YGL213C	ROK1	P45818	564 aa	Predicted RBP	5.31	□□□□□ -1.56
SKI8	YGL213C	DPB11	P47027	764 aa	Predicted RBP	5.31	□□□□□ -1.56
SKI8	YGL213C	YJL043W	P47053	257 aa		5.31	□□□□□ -1.56
SKI8	YGL213C	SXM1	Q04175	944 aa	Known RBP	5.31	□□□□□ -1.56
SKI8	YGL213C	VPS38	Q05919	439 aa		5.31	□□□□□ -1.56
SKI8	YGL213C	FMP40	Q08968	688 aa	Predicted RBP	5.31	□□□□□ -1.56
SKI8	YGL213C	ULA1	Q12059	462 aa		5.31	□□□□□ -1.56
SKI8	YGL213C	GRX6	Q12438	231 aa		5.31	□□□□□ -1.56
SKI8	YGL213C	RPN13	O13563	156 aa		5.3	□□□□□ -1.56
SKI8	YGL213C	ADH7	P25377	361 aa		5.3	□□□□□ -1.56
SKI8	YGL213C	YJU2	P28320	278 aa	Predicted RBP	5.3	□□□□□ -1.56
SKI8	YGL213C	GPI10	P30777	616 aa		5.3	□□□□□ -1.56
SKI8	YGL213C	RPC34	P32910	317 aa		5.3	□□□□□ -1.56
SKI8	YGL213C	VID24	P38263	362 aa		5.3	□□□□□ -1.56
SKI8	YGL213C	EXO1	P39875	702 aa		5.3	□□□□□ -1.56
SKI8	YGL213C	MET18	P40469	1032 aa		5.3	□□□□□ -1.56
SKI8	YGL213C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.3	□□□□□ -1.56	not detected
SKI8	YGL213C	VPS73	P53142	486 aa	Known RBP	5.3	□□□□□ -1.56
SKI8	YGL213C	YGR250C	P53316	781 aa	Known RBP	5.3	□□□□□ -1.56
SKI8	YGL213C	ZDS2	P54786	942 aa		5.3	□□□□□ -1.56
SKI8	YGL213C	CTF4	Q01454	927 aa		5.3	□□□□□ -1.56
SKI8	YGL213C	YDR239C	Q03780	787 aa		5.3	□□□□□ -1.56
SKI8	YGL213C	TMN2	Q04562	672 aa		5.3	□□□□□ -1.56
SKI8	YGL213C	ARO10	Q06408	635 aa		5.3	□□□□□ -1.56
SKI8	YGL213C	LUC7	Q07508	261 aa	Predicted RBP	5.3	□□□□□ -1.56
SKI8	YGL213C	ISA2	Q12425	185 aa		5.3	□□□□□ -1.56
SKI8	YGL213C	MF(ALPHA)1	P01149	165 aa		5.29	□□□□□ -1.56
SKI8	YGL213C	BI2	P03873	423 aa		5.29	□□□□□ -1.56
SKI8	YGL213C	ADE5,7	P07244	802 aa	Known RBP	5.29	□□□□□ -1.56
SKI8	YGL213C	CLB3	P24870	427 aa		5.29	□□□□□ -1.56
SKI8	YGL213C	SWI3	P32591	825 aa		5.29	□□□□□ -1.56
SKI8	YGL213C	EMP70	P32802	667 aa		5.29	□□□□□ -1.56
SKI8	YGL213C	SEF1	P34228	1148 aa		5.29	□□□□□ -1.56
SKI8	YGL213C	SMF1	P38925	575 aa		5.29	□□□□□ -1.56
SKI8	YGL213C	CCT6	P39079	546 aa		5.29	□□□□□ -1.56
SKI8	YGL213C	UIP3	P39547	235 aa		5.29	□□□□□ -1.56
SKI8	YGL213C	YFR020W	P43600	232 aa		5.29	□□□□□ -1.56
SKI8	YGL213C	YPL272C	Q08984	517 aa		5.29	□□□□□ -1.56
SKI8	YGL213C	INP53	Q12271	1107 aa		5.29	□□□□□ -1.56
SKI8	YGL213C	AVL9	Q12500	764 aa		5.29	□□□□□ -1.56
SKI8	YGL213C	GAL80	P04387	435 aa		5.28	□□□□□ -1.56
SKI8	YGL213C	PET111	P08468	800 aa		5.28	□□□□□ -1.56
SKI8	YGL213C	SPE2	P21182	396 aa		5.28	□□□□□ -1.56
SKI8	YGL213C	YMC1	P32331	307 aa		5.28	□□□□□ -1.56
SKI8	YGL213C	GSH1	P32477	678 aa		5.28	□□□□□ -1.56
SKI8	YGL213C	CST26	P38226	397 aa		5.28	□□□□□ -1.56
SKI8	YGL213C	ALG5	P40350	334 aa		5.28	□□□□□ -1.56
SKI8	YGL213C	PKP1	P40530	394 aa		5.28	□□□□□ -1.56
SKI8	YGL213C	RPN11	P43588	306 aa	Known RBP	5.28	□□□□□ -1.56
SKI8	YGL213C	YML6	P51998	286 aa		5.28	□□□□□ -1.56
SKI8	YGL213C	JJJ1	P53863	590 aa		5.28	□□□□□ -1.56
SKI8	YGL213C	MAK10	Q02197	733 aa		5.28	□□□□□ -1.56
SKI8	YGL213C	ERO1	Q03103	563 aa		5.28	□□□□□ -1.56
SKI8	YGL213C	THI3	Q07471	609 aa		5.28	□□□□□ -1.56
SKI8	YGL213C	MRP2	P10663	115 aa	Predicted RBP	5.27	□□□□□ -1.57
SKI8	YGL213C	SSE2	P32590	693 aa	Known RBP	5.27	□□□□□ -1.57
SKI8	YGL213C	RFC1	P38630	861 aa	Known RBP	5.27	□□□□□ -1.57
SKI8	YGL213C	YEL020C	P39994	560 aa		5.27	□□□□□ -1.57
SKI8	YGL213C	YJL068C	P40363	299 aa		5.27	□□□□□ -1.57
SKI8	YGL213C	SSU1	P41930	458 aa		5.27	□□□□□ -1.57
SKI8	YGL213C	NNF2	P53253	936 aa		5.27	□□□□□ -1.57
SKI8	YGL213C	IPI3	P53877	555 aa		5.27	□□□□□ -1.57
SKI8	YGL213C	RMT2	Q03305	412 aa		5.27	□□□□□ -1.57
SKI8	YGL213C	DPB4	Q04603	196 aa	Known RBP	5.27	□□□□□ -1.57
SKI8	YGL213C	RAD34	Q06665	692 aa		5.27	□□□□□ -1.57
SKI8	YGL213C	ATG29	Q12092	213 aa		5.27	□□□□□ -1.57
SKI8	YGL213C	YOL159C-A	Q3E769	90 aa		5.27	□□□□□ -1.57
SKI8	YGL213C	AQY1	P0CD91	305 aa		5.26	□□□□□ -1.57
SKI8	YGL213C	PDA1	P16387	420 aa	Known RBP	5.26	□□□□□ -1.57
SKI8	YGL213C	SPO11	P23179	398 aa		5.26	□□□□□ -1.57
SKI8	YGL213C	SAS3	P34218	831 aa		5.26	□□□□□ -1.57
SKI8	YGL213C	OTU2	P38747	307 aa	Known RBP	5.26	□□□□□ -1.57
SKI8	YGL213C	FAR3	P46671	204 aa		5.26	□□□□□ -1.57
SKI8	YGL213C	SMC3	P47037	1230 aa		5.26	□□□□□ -1.57
SKI8	YGL213C	IMD4	P50094	524 aa	Known RBP	5.26	□□□□□ -1.57
SKI8	YGL213C	YGR127W	P53275	312 aa		5.26	□□□□□ -1.57
SKI8	YGL213C	YPR003C	P53394	754 aa		5.26	□□□□□ -1.57
SKI8	YGL213C	RCF1	Q03713	159 aa		5.26	□□□□□ -1.57
SKI8	YGL213C	YLR049C	Q12110	428 aa		5.26	□□□□□ -1.57
SKI8	YGL213C	ATG9	Q12142	997 aa		5.26	□□□□□ -1.57
SKI8	YGL213C	LEU9	Q12166	604 aa	Known RBP	5.26	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 43 ms