RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W MSM1P22438 575 aa1.35□□□□□ -2.19
SMC1YFL008W ELO2P25358 347 aa1.35□□□□□ -2.19
SMC1YFL008W APM3P38153 483 aa1.35□□□□□ -2.19
SMC1YFL008W UBP13P38187 747 aa1.35□□□□□ -2.19
SMC1YFL008W PCL6P40038 420 aa1.35□□□□□ -2.19
SMC1YFL008W MAM1P40065 302 aa1.35□□□□□ -2.19
SMC1YFL008W IRC7P43623 340 aa1.35□□□□□ -2.19
SMC1YFL008W ATX2Q12067 313 aa1.35□□□□□ -2.19
SMC1YFL008W CRC1Q12289 327 aa1.35□□□□□ -2.19
SMC1YFL008W PGS1P25578 521 aa1.34□□□□□ -2.19
SMC1YFL008W AAP1P37898 856 aaKnown RBP1.34□□□□□ -2.19
SMC1YFL008W VMA13P41807 478 aaKnown RBP1.34□□□□□ -2.19
SMC1YFL008W YTP1P53584 459 aa1.34□□□□□ -2.19
SMC1YFL008W PAP2P53632 584 aaKnown RBP1.34□□□□□ -2.19
SMC1YFL008W ADE16P54113 591 aaKnown RBP1.34□□□□□ -2.19
SMC1YFL008W NUP100Q02629 959 aa1.34□□□□□ -2.19
SMC1YFL008W INA17Q02888 182 aa1.34□□□□□ -2.19
SMC1YFL008W YPL216WQ08964 1102 aa1.34□□□□□ -2.19
SMC1YFL008W RGT2Q12300 763 aa1.34□□□□□ -2.19
SMC1YFL008W PGI1P12709 554 aaKnown RBP1.34□□□□□ -2.2
SMC1YFL008W COQ3P27680 312 aa1.34□□□□□ -2.2
SMC1YFL008W ATP23P53722 227 aa1.34□□□□□ -2.2
SMC1YFL008W ESBP6P53918 673 aa1.34□□□□□ -2.2
SMC1YFL008W SNU56Q03782 492 aaKnown RBP1.34□□□□□ -2.2
SMC1YFL008W YML053CQ04978 212 aa1.34□□□□□ -2.2
SMC1YFL008W IMH1Q06704 911 aaKnown RBP1.34□□□□□ -2.2
SMC1YFL008W TGS1Q12052 315 aa1.34□□□□□ -2.2
SMC1YFL008W BAG7Q12128 409 aa1.34□□□□□ -2.2
SMC1YFL008W SSM4P40318 1319 aa1.34□□□□□ -2.2
SMC1YFL008W RPL42AP0CX27 106 aaKnown RBP1.34□□□□□ -2.2
SMC1YFL008W RPL42BP0CX28 106 aaKnown RBP1.34□□□□□ -2.2
SMC1YFL008W KGD1P20967 1014 aaKnown RBP1.34□□□□□ -2.2
SMC1YFL008W SPO11P23179 398 aa1.34□□□□□ -2.2
SMC1YFL008W GEX1P25596 615 aa1.34□□□□□ -2.2
SMC1YFL008W NET1P47035 1189 aa1.34□□□□□ -2.2
SMC1YFL008W YGL036WP53185 909 aaPredicted RBP1.34□□□□□ -2.2
SMC1YFL008W AFT2Q08957 416 aa1.34□□□□□ -2.2
SMC1YFL008W AHA1Q12449 350 aaKnown RBP1.34□□□□□ -2.2
SMC1YFL008W TMA7Q3E764 64 aaKnown RBP1.34□□□□□ -2.2
SMC1YFL008W YPR089WO13585 888 aa1.33□□□□□ -2.2
SMC1YFL008W TY2A-LR1P0C2J4 438 aa1.33□□□□□ -2.2
SMC1YFL008W TY2A-FP0CX61 438 aa1.33□□□□□ -2.2
SMC1YFL008W TY2A-GR2P0CX62 438 aa1.33□□□□□ -2.2
SMC1YFL008W CDC43P18898 376 aa1.33□□□□□ -2.2
SMC1YFL008W TY2A-CP25383 438 aa1.33□□□□□ -2.2
SMC1YFL008W ESL2P36168 1195 aa1.33□□□□□ -2.2
SMC1YFL008W MNN2P38069 597 aa1.33□□□□□ -2.2
SMC1YFL008W PIH1P38768 344 aa1.33□□□□□ -2.2
SMC1YFL008W KEL1P38853 1164 aaKnown RBP1.33□□□□□ -2.2
SMC1YFL008W XBP1P40489 647 aa1.33□□□□□ -2.2
SMC1YFL008W TES1P41903 349 aaKnown RBP1.33□□□□□ -2.2
SMC1YFL008W KTR5P53966 522 aaPredicted RBP1.33□□□□□ -2.2
SMC1YFL008W TY2A-DR2Q03483 438 aa1.33□□□□□ -2.2
SMC1YFL008W YMR087WQ04299 284 aa1.33□□□□□ -2.2
SMC1YFL008W HOS1Q12214 470 aa1.33□□□□□ -2.2
SMC1YFL008W TY2A-BQ12260 438 aa1.33□□□□□ -2.2
SMC1YFL008W TY2A-OR2Q12293 438 aa1.33□□□□□ -2.2
SMC1YFL008W TY2A-DR1Q12392 438 aa1.33□□□□□ -2.2
SMC1YFL008W TY2A-OR1Q12439 438 aa1.33□□□□□ -2.2
SMC1YFL008W YER175W-AQ8TGU4 54 aa1.33□□□□□ -2.2
SMC1YFL008W TY2A-DR3Q99303 438 aa1.33□□□□□ -2.2
SMC1YFL008W CTT1P06115 562 aa1.33□□□□□ -2.2
SMC1YFL008W AMD1P15274 810 aaKnown RBP1.33□□□□□ -2.2
SMC1YFL008W GUK1P15454 187 aaKnown RBP1.33□□□□□ -2.2
SMC1YFL008W RPA135P22138 1203 aaKnown RBP1.33□□□□□ -2.2
SMC1YFL008W MRP20P32387 263 aa1.33□□□□□ -2.2
SMC1YFL008W TOM71P38825 639 aaKnown RBP1.33□□□□□ -2.2
SMC1YFL008W ASG1P40467 964 aa1.33□□□□□ -2.2
SMC1YFL008W DPH1P40487 425 aaKnown RBP1.33□□□□□ -2.2
SMC1YFL008W YTH1Q06102 208 aaPredicted RBP1.33□□□□□ -2.2
SMC1YFL008W CRT10Q08226 957 aa1.33□□□□□ -2.2
SMC1YFL008W YLR422WQ06409 1932 aa1.33□□□□□ -2.2
SMC1YFL008W POM152P39685 1337 aa1.33□□□□□ -2.2
SMC1YFL008W UBA4P38820 440 aa1.33□□□□□ -2.2
SMC1YFL008W KRE9P39005 276 aa1.33□□□□□ -2.2
SMC1YFL008W TPM2P40414 161 aa1.33□□□□□ -2.2
SMC1YFL008W CIR1P42940 261 aa1.33□□□□□ -2.2
SMC1YFL008W HOL1P53389 586 aa1.33□□□□□ -2.2
SMC1YFL008W ARK1P53974 638 aa1.33□□□□□ -2.2
SMC1YFL008W VID22Q05934 901 aa1.33□□□□□ -2.2
SMC1YFL008W BNA5Q05979 453 aa1.33□□□□□ -2.2
SMC1YFL008W RVB2Q12464 471 aaKnown RBP1.33□□□□□ -2.2
SMC1YFL008W HEM1P09950 548 aaPredicted RBP1.32□□□□□ -2.2
SMC1YFL008W NUP1P20676 1076 aa1.32□□□□□ -2.2
SMC1YFL008W YCR022CP25620 114 aa1.32□□□□□ -2.2
SMC1YFL008W SNU114P36048 1008 aaKnown RBP1.32□□□□□ -2.2
SMC1YFL008W VPS24P36095 224 aaKnown RBP1.32□□□□□ -2.2
SMC1YFL008W NTR2P36118 322 aaPredicted RBP1.32□□□□□ -2.2
SMC1YFL008W FSH1P38777 243 aaKnown RBP1.32□□□□□ -2.2
SMC1YFL008W YER010CP40011 234 aa1.32□□□□□ -2.2
SMC1YFL008W PSA1P41940 361 aaKnown RBP1.32□□□□□ -2.2
SMC1YFL008W CTK2P46962 323 aa1.32□□□□□ -2.2
SMC1YFL008W APT1P49435 187 aaKnown RBP1.32□□□□□ -2.2
SMC1YFL008W YGR021WP53212 290 aa1.32□□□□□ -2.2
SMC1YFL008W SQS1P53866 767 aaKnown RBP1.32□□□□□ -2.2
SMC1YFL008W VPS64Q03944 604 aa1.32□□□□□ -2.2
SMC1YFL008W TAP42Q04372 366 aa1.32□□□□□ -2.2
SMC1YFL008W ATG23Q06671 453 aa1.32□□□□□ -2.2
SMC1YFL008W BSC1Q12140 328 aa1.32□□□□□ -2.2
SMC1YFL008W PGA3Q12746 312 aaKnown RBP1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms