RNA–Protein interactions for RNA: YDR356W

SPC110, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC110, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC110YDR356W INP52P50942 1183 aa1.5□□□□□ -2.17
SPC110YDR356W SBH2P52871 88 aa1.5□□□□□ -2.17
SPC110YDR356W CBK1P53894 756 aa1.5□□□□□ -2.17
SPC110YDR356W IMP4P53941 290 aaKnown RBP1.5□□□□□ -2.17
SPC110YDR356W PET117Q02771 107 aa1.5□□□□□ -2.17
SPC110YDR356W ABZ2Q03266 374 aa1.5□□□□□ -2.17
SPC110YDR356W TRS120Q04183 1289 aa1.5□□□□□ -2.17
SPC110YDR356W RSF1Q05043 376 aa1.5□□□□□ -2.17
SPC110YDR356W NUT2Q06213 157 aa1.5□□□□□ -2.17
SPC110YDR356W YDR306CQ06640 478 aa1.5□□□□□ -2.17
SPC110YDR356W RRP40Q08285 240 aaKnown RBP1.5□□□□□ -2.17
SPC110YDR356W SAM4Q08985 325 aaKnown RBP1.5□□□□□ -2.17
SPC110YDR356W YDR056CQ12025 205 aa1.5□□□□□ -2.17
SPC110YDR356W RIM20Q12033 661 aa1.5□□□□□ -2.17
SPC110YDR356W DAS2Q12084 232 aa1.5□□□□□ -2.17
SPC110YDR356W RAD59Q12223 238 aa1.5□□□□□ -2.17
SPC110YDR356W YOS9Q99220 542 aa1.5□□□□□ -2.17
SPC110YDR356W DNF3Q12674 1656 aa1.49□□□□□ -2.17
SPC110YDR356W IQG1Q12280 1495 aa1.49□□□□□ -2.17
SPC110YDR356W SIR4P11978 1358 aa1.49□□□□□ -2.17
SPC110YDR356W CDC28P00546 298 aaKnown RBP1.49□□□□□ -2.17
SPC110YDR356W BI4P03879 638 aa1.49□□□□□ -2.17
SPC110YDR356W ILS1P09436 1072 aaKnown RBP1.49□□□□□ -2.17
SPC110YDR356W RPS28BP0C0X0 67 aaKnown RBP1.49□□□□□ -2.17
SPC110YDR356W YMR085WP0CF18 432 aa1.49□□□□□ -2.17
SPC110YDR356W RPL4AP10664 362 aaKnown RBP1.49□□□□□ -2.17
SPC110YDR356W CKA1P15790 372 aa1.49□□□□□ -2.17
SPC110YDR356W RPB8P20436 146 aa1.49□□□□□ -2.17
SPC110YDR356W BEM1P29366 551 aa1.49□□□□□ -2.17
SPC110YDR356W ERG1P32476 496 aaKnown RBP1.49□□□□□ -2.17
SPC110YDR356W KAR9P32526 644 aa1.49□□□□□ -2.17
SPC110YDR356W YEL043WP32618 956 aa1.49□□□□□ -2.17
SPC110YDR356W MGM101P32787 269 aaKnown RBP1.49□□□□□ -2.17
SPC110YDR356W CSE1P33307 960 aa1.49□□□□□ -2.17
SPC110YDR356W WHI3P34761 661 aaKnown RBP1.49□□□□□ -2.17
SPC110YDR356W MDJ1P35191 511 aa1.49□□□□□ -2.17
SPC110YDR356W MTH1P35198 433 aa1.49□□□□□ -2.17
SPC110YDR356W LRG1P35688 1017 aa1.49□□□□□ -2.17
SPC110YDR356W RRT2P38332 387 aa1.49□□□□□ -2.17
SPC110YDR356W RCK1P38622 512 aa1.49□□□□□ -2.17
SPC110YDR356W MSR1P38714 643 aa1.49□□□□□ -2.17
SPC110YDR356W RPN10P38886 268 aaKnown RBP1.49□□□□□ -2.17
SPC110YDR356W ACA1P39970 489 aa1.49□□□□□ -2.17
SPC110YDR356W SIT1P39980 628 aa1.49□□□□□ -2.17
SPC110YDR356W ZRG8P40021 1076 aa1.49□□□□□ -2.17
SPC110YDR356W JHD1P40034 492 aa1.49□□□□□ -2.17
SPC110YDR356W YIL161WP40449 235 aaKnown RBP1.49□□□□□ -2.17
SPC110YDR356W FYV10P40492 516 aa1.49□□□□□ -2.17
SPC110YDR356W TED1P40533 473 aa1.49□□□□□ -2.17
SPC110YDR356W INA22P40576 216 aa1.49□□□□□ -2.17
SPC110YDR356W BUB1P41695 1021 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
SPC110YDR356W GAT1P43574 510 aa1.49□□□□□ -2.17
SPC110YDR356W STB2P46679 850 aa1.49□□□□□ -2.17
SPC110YDR356W RSM26P47141 266 aa1.49□□□□□ -2.17
SPC110YDR356W AAD10P47182 288 aa1.49□□□□□ -2.17
SPC110YDR356W YGR153WP48238 217 aa1.49□□□□□ -2.17
SPC110YDR356W RPL4BP49626 362 aaKnown RBP1.49□□□□□ -2.17
SPC110YDR356W YGL159WP53110 370 aa1.49□□□□□ -2.17
SPC110YDR356W CUE3P53137 624 aaKnown RBP1.49□□□□□ -2.17
SPC110YDR356W YGR017WP53210 297 aa1.49□□□□□ -2.17
SPC110YDR356W RRN9P53437 365 aa1.49□□□□□ -2.17
SPC110YDR356W YTP1P53584 459 aa1.49□□□□□ -2.17
SPC110YDR356W APP1P53933 587 aa1.49□□□□□ -2.17
SPC110YDR356W SIW14P53965 281 aa1.49□□□□□ -2.17
SPC110YDR356W PRO2P54885 456 aaKnown RBP1.49□□□□□ -2.17
SPC110YDR356W RHO3Q00245 231 aaKnown RBP1.49□□□□□ -2.17
SPC110YDR356W BET4Q00618 327 aa1.49□□□□□ -2.17
SPC110YDR356W AAT1Q01802 451 aa1.49□□□□□ -2.17
SPC110YDR356W MRPL13Q02204 264 aa1.49□□□□□ -2.17
SPC110YDR356W YDR090CQ03193 310 aa1.49□□□□□ -2.17
SPC110YDR356W PPM1Q04081 328 aa1.49□□□□□ -2.17
SPC110YDR356W PPN1Q04119 674 aa1.49□□□□□ -2.17
SPC110YDR356W MFB1Q04922 465 aa1.49□□□□□ -2.17
SPC110YDR356W GTB1Q04924 702 aa1.49□□□□□ -2.17
SPC110YDR356W TAF9Q05027 157 aa1.49□□□□□ -2.17
SPC110YDR356W YLR297WQ05899 129 aa1.49□□□□□ -2.17
SPC110YDR356W BOP2Q06150 570 aa1.49□□□□□ -2.17
SPC110YDR356W YLR173WQ06247 608 aa1.49□□□□□ -2.17
SPC110YDR356W AAD4Q07747 329 aa1.49□□□□□ -2.17
SPC110YDR356W CDC45Q08032 650 aa1.49□□□□□ -2.17
SPC110YDR356W RCL1Q08096 367 aaPredicted RBP1.49□□□□□ -2.17
SPC110YDR356W TCO89Q08921 799 aa1.49□□□□□ -2.17
SPC110YDR356W YIG1Q08956 461 aa1.49□□□□□ -2.17
SPC110YDR356W YPL225WQ08971 146 aaKnown RBP1.49□□□□□ -2.17
SPC110YDR356W RCN2Q12044 265 aa1.49□□□□□ -2.17
SPC110YDR356W YPR027CQ12079 277 aa1.49□□□□□ -2.17
SPC110YDR356W NMD4Q12129 218 aa1.49□□□□□ -2.17
SPC110YDR356W ATG9Q12142 997 aa1.49□□□□□ -2.17
SPC110YDR356W OSW2Q12202 724 aa1.49□□□□□ -2.17
SPC110YDR356W YOR022CQ12204 715 aa1.49□□□□□ -2.17
SPC110YDR356W LDB17Q12342 491 aa1.49□□□□□ -2.17
SPC110YDR356W SNU23Q12368 194 aaPredicted RBP1.49□□□□□ -2.17
SPC110YDR356W RTR2Q12378 196 aa1.49□□□□□ -2.17
SPC110YDR356W CTF3Q12748 733 aa1.49□□□□□ -2.17
SPC110YDR356W RPS28AQ3E7X9 67 aaPredicted RBP1.49□□□□□ -2.17
SPC110YDR356W TY2B-LR1P0C2J3 1770 aa1.49□□□□□ -2.17
SPC110YDR356W TY2B-FP0CX63 1770 aa1.49□□□□□ -2.17
SPC110YDR356W TY2B-GR2P0CX64 1770 aa1.49□□□□□ -2.17
SPC110YDR356W TY2B-CP25384 1770 aa1.49□□□□□ -2.17
SPC110YDR356W TY2B-DR2Q03494 1770 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms