RNA–Protein interactions for RNA: YDR055W

PST1, Transcript of Cell wall protein that contains a putative GPI-attachment site, yeast

Gene PST1, Length 1,335 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PST1	YDR055W	SRP54	P20424	541 aa	Known RBP	4.21	□□□□□ -1.73
PST1	YDR055W	PTC6	P25646	442 aa		4.21	□□□□□ -1.73
PST1	YDR055W	NTR2	P36118	322 aa	Predicted RBP	4.21	□□□□□ -1.73
PST1	YDR055W	SEC31	P38968	1273 aa	Known RBP	4.21	□□□□□ -1.73
PST1	YDR055W	RGI2	P40188	164 aa		4.21	□□□□□ -1.73
PST1	YDR055W	SPO22	P40511	975 aa		4.21	□□□□□ -1.73
PST1	YDR055W	SEC5	P89102	971 aa		4.21	□□□□□ -1.73
PST1	YDR055W	RSM28	Q03430	361 aa		4.21	□□□□□ -1.73
PST1	YDR055W	SPN1	Q06505	410 aa	Predicted RBP	4.21	□□□□□ -1.73
PST1	YDR055W	PSR1	Q07800	427 aa		4.21	□□□□□ -1.73
PST1	YDR055W	CIR2	Q08822	631 aa		4.21	□□□□□ -1.73
PST1	YDR055W	RED1	P14291	827 aa		4.21	□□□□□ -1.74
PST1	YDR055W	KAR3	P17119	729 aa		4.21	□□□□□ -1.74
PST1	YDR055W	SOF1	P33750	489 aa	Known RBP	4.21	□□□□□ -1.74
PST1	YDR055W	KES1	P35844	434 aa	Known RBP	4.21	□□□□□ -1.74
PST1	YDR055W	LHS1	P36016	881 aa		4.21	□□□□□ -1.74
PST1	YDR055W	AAP1	P37898	856 aa	Known RBP	4.21	□□□□□ -1.74
PST1	YDR055W	MRX1	P40050	688 aa		4.21	□□□□□ -1.74
PST1	YDR055W	ASG1	P40467	964 aa		4.21	□□□□□ -1.74
PST1	YDR055W	GAT1	P43574	510 aa		4.21	□□□□□ -1.74
PST1	YDR055W	NMD5	P46970	1048 aa		4.21	□□□□□ -1.74
PST1	YDR055W	YNL058C	P53947	316 aa		4.21	□□□□□ -1.74
PST1	YDR055W	STP1	Q00947	519 aa		4.21	□□□□□ -1.74
PST1	YDR055W	INA17	Q02888	182 aa		4.21	□□□□□ -1.74
PST1	YDR055W	YLR111W	Q12528	110 aa		4.21	□□□□□ -1.74
PST1	YDR055W	RTC1	Q08281	1341 aa		4.2	□□□□□ -1.74
PST1	YDR055W	PCT1	P13259	424 aa		4.2	□□□□□ -1.74
PST1	YDR055W	OCA4	P25366	362 aa		4.2	□□□□□ -1.74
PST1	YDR055W	NPL6	P32832	435 aa		4.2	□□□□□ -1.74
PST1	YDR055W	AGP2	P38090	596 aa		4.2	□□□□□ -1.74
PST1	YDR055W	UBP13	P38187	747 aa		4.2	□□□□□ -1.74
PST1	YDR055W	REG2	P38232	338 aa		4.2	□□□□□ -1.74
PST1	YDR055W	AFG3	P39925	761 aa		4.2	□□□□□ -1.74
PST1	YDR055W	SAE2	P46946	345 aa		4.2	□□□□□ -1.74
PST1	YDR055W	YOR389W	Q08912	624 aa		4.2	□□□□□ -1.74
PST1	YDR055W	LEA1	Q08963	238 aa	Predicted RBP	4.2	□□□□□ -1.74
PST1	YDR055W	RGT2	Q12300	763 aa		4.2	□□□□□ -1.74
PST1	YDR055W	SPE4	Q12455	300 aa		4.2	□□□□□ -1.74
PST1	YDR055W	VMA16	P23968	213 aa		4.19	□□□□□ -1.74
PST1	YDR055W	PDB1	P32473	366 aa	Known RBP	4.19	□□□□□ -1.74
PST1	YDR055W	ECM32	P32644	1121 aa	Known RBP	4.19	□□□□□ -1.74
PST1	YDR055W	BYE1	P36106	594 aa		4.19	□□□□□ -1.74
PST1	YDR055W	ADE17	P38009	592 aa	Known RBP	4.19	□□□□□ -1.74
PST1	YDR055W	YNG2	P38806	282 aa	Known RBP	4.19	□□□□□ -1.74
PST1	YDR055W	UTP9	P38882	575 aa	Known RBP	4.19	□□□□□ -1.74
PST1	YDR055W	SNO3	P43544	222 aa		4.19	□□□□□ -1.74
PST1	YDR055W	RSC9	Q03124	581 aa		4.19	□□□□□ -1.74
PST1	YDR055W	YML037C	Q03703	340 aa		4.19	□□□□□ -1.74
PST1	YDR055W	BUD22	Q04347	519 aa	Known RBP	4.19	□□□□□ -1.74
PST1	YDR055W	CYK3	Q07533	885 aa		4.19	□□□□□ -1.74
PST1	YDR055W	YEH1	Q07804	573 aa		4.19	□□□□□ -1.74
PST1	YDR055W	INO80	P53115	1489 aa		4.18	□□□□□ -1.74
PST1	YDR055W	MON2	P48563	1636 aa	Predicted RBP	4.18	□□□□□ -1.74
PST1	YDR055W	HXK2	P04807	486 aa	Known RBP	4.18	□□□□□ -1.74
PST1	YDR055W	ROX1	P25042	368 aa		4.18	□□□□□ -1.74
PST1	YDR055W	SRO77	P38163	1010 aa		4.18	□□□□□ -1.74
PST1	YDR055W	PHM8	P40025	321 aa		4.18	□□□□□ -1.74
PST1	YDR055W	GPD2	P41911	440 aa	Known RBP	4.18	□□□□□ -1.74
PST1	YDR055W	IRC8	P47046	822 aa		4.18	□□□□□ -1.74
PST1	YDR055W	IST1	P53843	298 aa	Predicted RBP	4.18	□□□□□ -1.74
PST1	YDR055W	ERG13	P54839	491 aa	Known RBP	4.18	□□□□□ -1.74
PST1	YDR055W	YMR155W	Q03795	547 aa		4.18	□□□□□ -1.74
PST1	YDR055W	SFI1	Q12369	946 aa		4.18	□□□□□ -1.74
PST1	YDR055W	YJR112W-A	Q3E743	109 aa		4.18	□□□□□ -1.74
PST1	YDR055W	BI2	P03873	423 aa		4.17	□□□□□ -1.74
PST1	YDR055W	PWP1	P21304	576 aa	Known RBP	4.17	□□□□□ -1.74
PST1	YDR055W	LCB1	P25045	558 aa	Known RBP	4.17	□□□□□ -1.74
PST1	YDR055W	YIH1	P25637	258 aa		4.17	□□□□□ -1.74
PST1	YDR055W	GSH1	P32477	678 aa		4.17	□□□□□ -1.74
PST1	YDR055W	ECM10	P39987	644 aa		4.17	□□□□□ -1.74
PST1	YDR055W	DPB11	P47027	764 aa	Predicted RBP	4.17	□□□□□ -1.74
PST1	YDR055W	RPS7B	P48164	190 aa	Known RBP	4.17	□□□□□ -1.74
PST1	YDR055W	YPR003C	P53394	754 aa		4.17	□□□□□ -1.74
PST1	YDR055W	RAD34	Q06665	692 aa		4.17	□□□□□ -1.74
PST1	YDR055W	YPT6	Q99260	215 aa		4.17	□□□□□ -1.74
PST1	YDR055W	ARD1	P07347	238 aa	Predicted RBP	4.16	□□□□□ -1.74
PST1	YDR055W	EST1	P17214	699 aa	Predicted RBP	4.16	□□□□□ -1.74
PST1	YDR055W	URE2	P23202	354 aa	Known RBP	4.16	□□□□□ -1.74
PST1	YDR055W	ERG3	P32353	365 aa		4.16	□□□□□ -1.74
PST1	YDR055W	MNN2	P38069	597 aa		4.16	□□□□□ -1.74
PST1	YDR055W	YEL057C	P39983	233 aa		4.16	□□□□□ -1.74
PST1	YDR055W	DOT5	P40553	215 aa		4.16	□□□□□ -1.74
PST1	YDR055W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
PST1	YDR055W	STR3	P53101	465 aa	Known RBP	4.16	□□□□□ -1.74
PST1	YDR055W	YGR066C	P53242	292 aa		4.16	□□□□□ -1.74
PST1	YDR055W	IDP3	P53982	420 aa	Known RBP	4.16	□□□□□ -1.74
PST1	YDR055W	VPS38	Q05919	439 aa		4.16	□□□□□ -1.74
PST1	YDR055W	BUD7	Q08754	746 aa		4.16	□□□□□ -1.74
PST1	YDR055W	GET3	Q12154	354 aa	Known RBP	4.16	□□□□□ -1.74
PST1	YDR055W	RTN2	Q12443	393 aa		4.16	□□□□□ -1.74
PST1	YDR055W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
PST1	YDR055W	PET111	P08468	800 aa		4.15	□□□□□ -1.75
PST1	YDR055W	MRP2	P10663	115 aa	Predicted RBP	4.15	□□□□□ -1.75
PST1	YDR055W	HOM3	P10869	527 aa		4.15	□□□□□ -1.75
PST1	YDR055W	ADH7	P25377	361 aa		4.15	□□□□□ -1.75
PST1	YDR055W	PXA2	P34230	853 aa		4.15	□□□□□ -1.75
PST1	YDR055W	DIA4	P38705	446 aa	Predicted RBP	4.15	□□□□□ -1.75
PST1	YDR055W	MET28	P40573	187 aa		4.15	□□□□□ -1.75
PST1	YDR055W	RPN11	P43588	306 aa	Known RBP	4.15	□□□□□ -1.75
PST1	YDR055W	YFR020W	P43600	232 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms