RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C YDR109CQ04585 715 aa3.6□□□□□ -1.83
RRP42YDL111C OSW1Q08692 278 aa3.6□□□□□ -1.83
RRP42YDL111C GRX6Q12438 231 aa3.6□□□□□ -1.83
RRP42YDL111C SPE4Q12455 300 aa3.6□□□□□ -1.83
RRP42YDL111C SMC6Q12749 1114 aa3.6□□□□□ -1.83
RRP42YDL111C YMR084WA2P2R3 262 aa3.59□□□□□ -1.83
RRP42YDL111C TPK2P06245 380 aa3.59□□□□□ -1.83
RRP42YDL111C SES1P07284 462 aaKnown RBP3.59□□□□□ -1.83
RRP42YDL111C PCT1P13259 424 aa3.59□□□□□ -1.83
RRP42YDL111C SRP54P20424 541 aaKnown RBP3.59□□□□□ -1.83
RRP42YDL111C VMA16P23968 213 aa3.59□□□□□ -1.83
RRP42YDL111C SWI3P32591 825 aa3.59□□□□□ -1.83
RRP42YDL111C SOF1P33750 489 aaKnown RBP3.59□□□□□ -1.83
RRP42YDL111C UBP11P36026 717 aa3.59□□□□□ -1.83
RRP42YDL111C YMC2P38087 329 aa3.59□□□□□ -1.83
RRP42YDL111C SRO77P38163 1010 aa3.59□□□□□ -1.83
RRP42YDL111C DIA4P38705 446 aaPredicted RBP3.59□□□□□ -1.83
RRP42YDL111C UIP3P39547 235 aa3.59□□□□□ -1.83
RRP42YDL111C YEL057CP39983 233 aa3.59□□□□□ -1.83
RRP42YDL111C MIT1P40002 666 aa3.59□□□□□ -1.83
RRP42YDL111C MRX1P40050 688 aa3.59□□□□□ -1.83
RRP42YDL111C ASG1P40467 964 aa3.59□□□□□ -1.83
RRP42YDL111C MET18P40469 1032 aa3.59□□□□□ -1.83
RRP42YDL111C YGL117WP53133 265 aa3.59□□□□□ -1.83
RRP42YDL111C YGR250CP53316 781 aaKnown RBP3.59□□□□□ -1.83
RRP42YDL111C YNL058CP53947 316 aa3.59□□□□□ -1.83
RRP42YDL111C WAR1Q03631 944 aa3.59□□□□□ -1.83
RRP42YDL111C RAD33Q04231 177 aa3.59□□□□□ -1.83
RRP42YDL111C BUD22Q04347 519 aaKnown RBP3.59□□□□□ -1.83
RRP42YDL111C ARG7Q04728 441 aa3.59□□□□□ -1.83
RRP42YDL111C YML053CQ04978 212 aa3.59□□□□□ -1.83
RRP42YDL111C GET3Q12154 354 aaKnown RBP3.59□□□□□ -1.83
RRP42YDL111C YPT6Q99260 215 aa3.59□□□□□ -1.83
RRP42YDL111C Q0010Q9ZZX9 128 aa3.59□□□□□ -1.83
RRP42YDL111C HXK2P04807 486 aaKnown RBP3.58□□□□□ -1.84
RRP42YDL111C ADH7P25377 361 aa3.58□□□□□ -1.84
RRP42YDL111C LHS1P36016 881 aa3.58□□□□□ -1.84
RRP42YDL111C VID24P38263 362 aa3.58□□□□□ -1.84
RRP42YDL111C LRP1P38801 184 aaKnown RBP3.58□□□□□ -1.84
RRP42YDL111C SMF1P38925 575 aa3.58□□□□□ -1.84
RRP42YDL111C CCT6P39079 546 aa3.58□□□□□ -1.84
RRP42YDL111C LYS4P49367 693 aaPredicted RBP3.58□□□□□ -1.84
RRP42YDL111C VID30P53076 958 aa3.58□□□□□ -1.84
RRP42YDL111C ADE16P54113 591 aaKnown RBP3.58□□□□□ -1.84
RRP42YDL111C ZDS2P54786 942 aa3.58□□□□□ -1.84
RRP42YDL111C VPS9P54787 451 aa3.58□□□□□ -1.84
RRP42YDL111C RSM28Q03430 361 aa3.58□□□□□ -1.84
RRP42YDL111C SEG1Q04279 960 aa3.58□□□□□ -1.84
RRP42YDL111C SLK19Q08581 821 aaKnown RBP3.58□□□□□ -1.84
RRP42YDL111C PCL8Q08966 492 aa3.58□□□□□ -1.84
RRP42YDL111C RIM20Q12033 661 aa3.58□□□□□ -1.84
RRP42YDL111C AHA1Q12449 350 aaKnown RBP3.58□□□□□ -1.84
RRP42YDL111C RPL7AP05737 244 aaKnown RBP3.57□□□□□ -1.84
RRP42YDL111C ARD1P07347 238 aaPredicted RBP3.57□□□□□ -1.84
RRP42YDL111C PMA2P19657 947 aa3.57□□□□□ -1.84
RRP42YDL111C OPI1P21957 404 aa3.57□□□□□ -1.84
RRP42YDL111C CLB3P24870 427 aa3.57□□□□□ -1.84
RRP42YDL111C RRP43P25359 394 aaPredicted RBP3.57□□□□□ -1.84
RRP42YDL111C CST26P38226 397 aa3.57□□□□□ -1.84
RRP42YDL111C SAP1P39955 897 aaKnown RBP3.57□□□□□ -1.84
RRP42YDL111C YJL068CP40363 299 aa3.57□□□□□ -1.84
RRP42YDL111C PKP1P40530 394 aa3.57□□□□□ -1.84
RRP42YDL111C TDA10P42938 290 aa3.57□□□□□ -1.84
RRP42YDL111C CTK2P46962 323 aa3.57□□□□□ -1.84
RRP42YDL111C DPB11P47027 764 aaPredicted RBP3.57□□□□□ -1.84
RRP42YDL111C BOP3P53958 396 aa3.57□□□□□ -1.84
RRP42YDL111C RIM13Q03792 727 aa3.57□□□□□ -1.84
RRP42YDL111C YDR131CQ03899 556 aa3.57□□□□□ -1.84
RRP42YDL111C HRD3Q05787 833 aa3.57□□□□□ -1.84
RRP42YDL111C ECM22Q05958 814 aaPredicted RBP3.57□□□□□ -1.84
RRP42YDL111C FMP40Q08968 688 aaPredicted RBP3.57□□□□□ -1.84
RRP42YDL111C RPL7BQ12213 244 aaKnown RBP3.57□□□□□ -1.84
RRP42YDL111C AVL9Q12500 764 aa3.57□□□□□ -1.84
RRP42YDL111C MF(ALPHA)1P01149 165 aa3.56□□□□□ -1.84
RRP42YDL111C OTU2P38747 307 aaKnown RBP3.56□□□□□ -1.84
RRP42YDL111C ECM10P39987 644 aa3.56□□□□□ -1.84
RRP42YDL111C BUR6P40096 142 aa3.56□□□□□ -1.84
RRP42YDL111C YFL015CP43578 164 aa3.56□□□□□ -1.84
RRP42YDL111C FAR3P46671 204 aa3.56□□□□□ -1.84
RRP42YDL111C DIA3P52290 468 aa3.56□□□□□ -1.84
RRP42YDL111C RMT2Q03305 412 aa3.56□□□□□ -1.84
RRP42YDL111C FIN1Q03898 291 aa3.56□□□□□ -1.84
RRP42YDL111C VPS38Q05919 439 aa3.56□□□□□ -1.84
RRP42YDL111C LUC7Q07508 261 aaPredicted RBP3.56□□□□□ -1.84
RRP42YDL111C ETT1Q08421 412 aaKnown RBP3.56□□□□□ -1.84
RRP42YDL111C BUD7Q08754 746 aa3.56□□□□□ -1.84
RRP42YDL111C LEA1Q08963 238 aaPredicted RBP3.56□□□□□ -1.84
RRP42YDL111C ATG29Q12092 213 aa3.56□□□□□ -1.84
RRP42YDL111C ISA2Q12425 185 aa3.56□□□□□ -1.84
RRP42YDL111C ILV2P07342 687 aaKnown RBP3.55□□□□□ -1.84
RRP42YDL111C PMS1P14242 873 aa3.55□□□□□ -1.84
RRP42YDL111C PTC6P25646 442 aa3.55□□□□□ -1.84
RRP42YDL111C ADK2P26364 225 aa3.55□□□□□ -1.84
RRP42YDL111C YJU2P28320 278 aaPredicted RBP3.55□□□□□ -1.84
RRP42YDL111C GPI10P30777 616 aa3.55□□□□□ -1.84
RRP42YDL111C SSE2P32590 693 aaKnown RBP3.55□□□□□ -1.84
RRP42YDL111C MRE11P32829 692 aa3.55□□□□□ -1.84
RRP42YDL111C SNU114P36048 1008 aaKnown RBP3.55□□□□□ -1.84
RRP42YDL111C APE4P38821 490 aa3.55□□□□□ -1.84
RRP42YDL111C AFG3P39925 761 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms