RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W RTS1P38903 757 aa3.89□□□□□ -1.79
UBC9YDL064W LTP1P40347 161 aa3.89□□□□□ -1.79
UBC9YDL064W TMA108P40462 946 aa3.89□□□□□ -1.79
UBC9YDL064W CFD1P40558 293 aa3.89□□□□□ -1.79
UBC9YDL064W GAT1P43574 510 aa3.89□□□□□ -1.79
UBC9YDL064W NET1P47035 1189 aa3.89□□□□□ -1.79
UBC9YDL064W RPS7BP48164 190 aaKnown RBP3.89□□□□□ -1.79
UBC9YDL064W LCL3P53153 274 aa3.89□□□□□ -1.79
UBC9YDL064W STP1Q00947 519 aa3.89□□□□□ -1.79
UBC9YDL064W NGL3Q03210 505 aa3.89□□□□□ -1.79
UBC9YDL064W YLR112WQ12130 139 aa3.89□□□□□ -1.79
UBC9YDL064W PWP1P21304 576 aaKnown RBP3.88□□□□□ -1.79
UBC9YDL064W INA17Q02888 182 aa3.88□□□□□ -1.79
UBC9YDL064W SPE4Q12455 300 aa3.88□□□□□ -1.79
UBC9YDL064W YBR126W-AQ8TGU7 68 aa3.88□□□□□ -1.79
UBC9YDL064W YPT1P01123 206 aaKnown RBP3.87□□□□□ -1.79
UBC9YDL064W HXK2P04807 486 aaKnown RBP3.87□□□□□ -1.79
UBC9YDL064W RAP1P11938 827 aa3.87□□□□□ -1.79
UBC9YDL064W POL4P25615 582 aa3.87□□□□□ -1.79
UBC9YDL064W RPN11P43588 306 aaKnown RBP3.87□□□□□ -1.79
UBC9YDL064W DPB11P47027 764 aaPredicted RBP3.87□□□□□ -1.79
UBC9YDL064W YPT11P48559 417 aa3.87□□□□□ -1.79
UBC9YDL064W RPL15BP54780 204 aaPredicted RBP3.87□□□□□ -1.79
UBC9YDL064W TMA64Q04600 565 aaKnown RBP3.87□□□□□ -1.79
UBC9YDL064W PSR1Q07800 427 aa3.87□□□□□ -1.79
UBC9YDL064W TCO89Q08921 799 aa3.87□□□□□ -1.79
UBC9YDL064W HER1Q12276 1246 aa3.87□□□□□ -1.79
UBC9YDL064W SEM1O94742 89 aa3.86□□□□□ -1.79
UBC9YDL064W KRS1P15180 591 aaKnown RBP3.86□□□□□ -1.79
UBC9YDL064W SAC1P32368 623 aaKnown RBP3.86□□□□□ -1.79
UBC9YDL064W AUR1P36107 401 aaPredicted RBP3.86□□□□□ -1.79
UBC9YDL064W ARP1P38696 384 aa3.86□□□□□ -1.79
UBC9YDL064W HXT9P40885 567 aa3.86□□□□□ -1.79
UBC9YDL064W DSD1P53095 428 aa3.86□□□□□ -1.79
UBC9YDL064W STR3P53101 465 aaKnown RBP3.86□□□□□ -1.79
UBC9YDL064W NNF2P53253 936 aa3.86□□□□□ -1.79
UBC9YDL064W IST1P53843 298 aaPredicted RBP3.86□□□□□ -1.79
UBC9YDL064W YNL144CP53907 740 aa3.86□□□□□ -1.79
UBC9YDL064W MAK10Q02197 733 aa3.86□□□□□ -1.79
UBC9YDL064W CIR2Q08822 631 aa3.86□□□□□ -1.79
UBC9YDL064W INP53Q12271 1107 aa3.86□□□□□ -1.79
UBC9YDL064W RRI2Q12348 645 aa3.86□□□□□ -1.79
UBC9YDL064W RPL42AP0CX27 106 aaKnown RBP3.85□□□□□ -1.79
UBC9YDL064W RPL42BP0CX28 106 aaKnown RBP3.85□□□□□ -1.79
UBC9YDL064W MET8P15807 274 aa3.85□□□□□ -1.79
UBC9YDL064W KGD1P20967 1014 aaKnown RBP3.85□□□□□ -1.79
UBC9YDL064W PRE8P23639 250 aa3.85□□□□□ -1.79
UBC9YDL064W PDB1P32473 366 aaKnown RBP3.85□□□□□ -1.79
UBC9YDL064W SNU114P36048 1008 aaKnown RBP3.85□□□□□ -1.79
UBC9YDL064W LEU5P38702 357 aa3.85□□□□□ -1.79
UBC9YDL064W GND1P38720 489 aaKnown RBP3.85□□□□□ -1.79
UBC9YDL064W ANS1P38832 159 aa3.85□□□□□ -1.79
UBC9YDL064W PKP1P40530 394 aa3.85□□□□□ -1.79
UBC9YDL064W UBP8P50102 471 aa3.85□□□□□ -1.79
UBC9YDL064W SWF1Q04629 336 aa3.85□□□□□ -1.79
UBC9YDL064W GEP3Q08622 556 aa3.85□□□□□ -1.79
UBC9YDL064W YPL272CQ08984 517 aa3.85□□□□□ -1.79
UBC9YDL064W HUA2Q12134 243 aa3.85□□□□□ -1.79
UBC9YDL064W MED1Q12321 566 aa3.85□□□□□ -1.79
UBC9YDL064W YPR089WO13585 888 aa3.84□□□□□ -1.79
UBC9YDL064W AIM17P23180 465 aaKnown RBP3.84□□□□□ -1.79
UBC9YDL064W IMP2'P32351 346 aa3.84□□□□□ -1.79
UBC9YDL064W SCO2P38072 301 aa3.84□□□□□ -1.79
UBC9YDL064W YBL029WP38201 376 aa3.84□□□□□ -1.79
UBC9YDL064W DIA4P38705 446 aaPredicted RBP3.84□□□□□ -1.79
UBC9YDL064W YNG2P38806 282 aaKnown RBP3.84□□□□□ -1.79
UBC9YDL064W YIL060WP40519 144 aa3.84□□□□□ -1.79
UBC9YDL064W VPS72Q03388 795 aa3.84□□□□□ -1.79
UBC9YDL064W RPC11Q04307 110 aaPredicted RBP3.84□□□□□ -1.79
UBC9YDL064W IMH1Q06704 911 aaKnown RBP3.84□□□□□ -1.79
UBC9YDL064W RTT109Q07794 436 aa3.84□□□□□ -1.79
UBC9YDL064W ARD1P07347 238 aaPredicted RBP3.83□□□□□ -1.8
UBC9YDL064W CLB2P24869 491 aa3.83□□□□□ -1.8
UBC9YDL064W LCB1P25045 558 aaKnown RBP3.83□□□□□ -1.8
UBC9YDL064W YCP4P25349 247 aaKnown RBP3.83□□□□□ -1.8
UBC9YDL064W PGS1P25578 521 aa3.83□□□□□ -1.8
UBC9YDL064W RFC1P38630 861 aaKnown RBP3.83□□□□□ -1.8
UBC9YDL064W TOM71P38825 639 aaKnown RBP3.83□□□□□ -1.8
UBC9YDL064W NAB3P38996 802 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
UBC9YDL064W YMR124WP39523 943 aaKnown RBP3.83□□□□□ -1.8
UBC9YDL064W UIP3P39547 235 aa3.83□□□□□ -1.8
UBC9YDL064W MRX6P48564 524 aa3.83□□□□□ -1.8
UBC9YDL064W DIA3P52290 468 aa3.83□□□□□ -1.8
UBC9YDL064W SGF73P53165 657 aa3.83□□□□□ -1.8
UBC9YDL064W YML037CQ03703 340 aa3.83□□□□□ -1.8
UBC9YDL064W CAC2Q04199 468 aa3.83□□□□□ -1.8
UBC9YDL064W ADE13Q05911 482 aaKnown RBP3.83□□□□□ -1.8
UBC9YDL064W COG4Q06096 861 aa3.83□□□□□ -1.8
UBC9YDL064W POS5Q06892 414 aa3.83□□□□□ -1.8
UBC9YDL064W RPS10AQ08745 105 aaPredicted RBP3.83□□□□□ -1.8
UBC9YDL064W ATX2Q12067 313 aa3.83□□□□□ -1.8
UBC9YDL064W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
UBC9YDL064W OLE1P21147 510 aaKnown RBP3.82□□□□□ -1.8
UBC9YDL064W VMA16P23968 213 aa3.82□□□□□ -1.8
UBC9YDL064W SYN8P31377 255 aa3.82□□□□□ -1.8
UBC9YDL064W ELO1P39540 310 aa3.82□□□□□ -1.8
UBC9YDL064W ERP2P39704 215 aa3.82□□□□□ -1.8
UBC9YDL064W NPR2P39923 615 aa3.82□□□□□ -1.8
UBC9YDL064W NDE1P40215 560 aa3.82□□□□□ -1.8
UBC9YDL064W SGN1P40561 250 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms