RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeast

Gene PTC1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC1	YDL006W	MGM1	P32266	881 aa		4.93	□□□□□ -1.62
PTC1	YDL006W	SMY1	P32364	656 aa	Known RBP	4.93	□□□□□ -1.62
PTC1	YDL006W	CBF2	P32504	956 aa		4.93	□□□□□ -1.62
PTC1	YDL006W	CNS1	P33313	385 aa		4.93	□□□□□ -1.62
PTC1	YDL006W	GEX2	P36173	615 aa		4.93	□□□□□ -1.62
PTC1	YDL006W	SAP1	P39955	897 aa	Known RBP	4.93	□□□□□ -1.62
PTC1	YDL006W	NPA3	P47122	385 aa		4.93	□□□□□ -1.62
PTC1	YDL006W	YGL242C	P53066	181 aa		4.93	□□□□□ -1.62
PTC1	YDL006W	COG1	P53079	417 aa		4.93	□□□□□ -1.62
PTC1	YDL006W	SVL3	Q03088	825 aa	Known RBP	4.93	□□□□□ -1.62
PTC1	YDL006W	UBX2	Q04228	584 aa		4.93	□□□□□ -1.62
PTC1	YDL006W	YML053C	Q04978	212 aa		4.93	□□□□□ -1.62
PTC1	YDL006W	SPN1	Q06505	410 aa	Predicted RBP	4.93	□□□□□ -1.62
PTC1	YDL006W	CYK3	Q07533	885 aa		4.93	□□□□□ -1.62
PTC1	YDL006W	GRX6	Q12438	231 aa		4.93	□□□□□ -1.62
PTC1	YDL006W	CDC16	P09798	840 aa		4.92	□□□□□ -1.62
PTC1	YDL006W	AQY1	P0CD91	305 aa		4.92	□□□□□ -1.62
PTC1	YDL006W	LAC1	P28496	418 aa		4.92	□□□□□ -1.62
PTC1	YDL006W	SWE1	P32944	819 aa		4.92	□□□□□ -1.62
PTC1	YDL006W	YER010C	P40011	234 aa		4.92	□□□□□ -1.62
PTC1	YDL006W	RIC1	P40395	1056 aa		4.92	□□□□□ -1.62
PTC1	YDL006W	UBX6	P47049	396 aa		4.92	□□□□□ -1.62
PTC1	YDL006W	YJL043W	P47053	257 aa		4.92	□□□□□ -1.62
PTC1	YDL006W	YAT1	P80235	687 aa		4.92	□□□□□ -1.62
PTC1	YDL006W	YMR018W	Q04364	514 aa		4.92	□□□□□ -1.62
PTC1	YDL006W	TRM8	Q12009	286 aa		4.92	□□□□□ -1.62
PTC1	YDL006W	AI5_ALPHA	Q9ZZX1	630 aa		4.92	□□□□□ -1.62
PTC1	YDL006W	YML003W	P0CF16	290 aa		4.91	□□□□□ -1.62
PTC1	YDL006W	KRE2	P27809	442 aa		4.91	□□□□□ -1.62
PTC1	YDL006W	FLO10	P36170	1169 aa		4.91	□□□□□ -1.62
PTC1	YDL006W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
PTC1	YDL006W	RPT4	P53549	437 aa	Known RBP	4.91	□□□□□ -1.62
PTC1	YDL006W	RDL1	Q12305	139 aa	Known RBP	4.91	□□□□□ -1.62
PTC1	YDL006W	TAD3	Q9URQ3	322 aa		4.91	□□□□□ -1.62
PTC1	YDL006W	POM152	P39685	1337 aa		4.91	□□□□□ -1.62
PTC1	YDL006W	COX1	P00401	534 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	BI2	P03873	423 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	GUK1	P15454	187 aa	Known RBP	4.9	□□□□□ -1.63
PTC1	YDL006W	ICL1	P28240	557 aa	Predicted RBP	4.9	□□□□□ -1.63
PTC1	YDL006W	HOT13	P36078	116 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	AXL2	P38928	823 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	VID27	P40157	782 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	SAE2	P46946	345 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	MSY1	P48527	492 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	VPS4	P52917	437 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	RCO1	Q04779	684 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	BSP1	Q06604	576 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	RAD34	Q06665	692 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	OSW1	Q08692	278 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	NBP2	Q12163	236 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	NDJ1	Q12366	352 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	ERG27	Q12452	347 aa	Known RBP	4.9	□□□□□ -1.63
PTC1	YDL006W	PCD1	Q12524	340 aa		4.9	□□□□□ -1.63
PTC1	YDL006W	CET1	O13297	549 aa	Predicted RBP	4.89	□□□□□ -1.63
PTC1	YDL006W	TFC3	P34111	1160 aa		4.89	□□□□□ -1.63
PTC1	YDL006W	KTR3	P38130	404 aa	Predicted RBP	4.89	□□□□□ -1.63
PTC1	YDL006W	UBP7	P40453	1071 aa		4.89	□□□□□ -1.63
PTC1	YDL006W	DCP2	P53550	970 aa	Known RBP	4.89	□□□□□ -1.63
PTC1	YDL006W	VCX1	Q99385	411 aa		4.89	□□□□□ -1.63
PTC1	YDL006W	YLR302C	O13544	120 aa		4.88	□□□□□ -1.63
PTC1	YDL006W	ILV2	P07342	687 aa	Known RBP	4.88	□□□□□ -1.63
PTC1	YDL006W	HOM2	P13663	365 aa	Known RBP	4.88	□□□□□ -1.63
PTC1	YDL006W	TPM1	P17536	199 aa	Known RBP	4.88	□□□□□ -1.63
PTC1	YDL006W	MCM10	P32354	571 aa		4.88	□□□□□ -1.63
PTC1	YDL006W	CUE2	P36075	443 aa	Known RBP	4.88	□□□□□ -1.63
PTC1	YDL006W	OSH3	P38713	996 aa	Known RBP	4.88	□□□□□ -1.63
PTC1	YDL006W	SPL2	P38839	148 aa		4.88	□□□□□ -1.63
PTC1	YDL006W	TAX4	P47030	604 aa		4.88	□□□□□ -1.63
PTC1	YDL006W	MEP3	P53390	489 aa		4.88	□□□□□ -1.63
PTC1	YDL006W	IRC4	Q03036	179 aa		4.88	□□□□□ -1.63
PTC1	YDL006W	YDR109C	Q04585	715 aa		4.88	□□□□□ -1.63
PTC1	YDL006W	INM2	Q05533	292 aa		4.88	□□□□□ -1.63
PTC1	YDL006W	COQ11	Q05892	277 aa		4.88	□□□□□ -1.63
PTC1	YDL006W	STP3	Q05937	343 aa		4.88	□□□□□ -1.63
PTC1	YDL006W	TMA16	Q08687	178 aa		4.88	□□□□□ -1.63
PTC1	YDL006W	LEA1	Q08963	238 aa	Predicted RBP	4.88	□□□□□ -1.63
PTC1	YDL006W	RIM20	Q12033	661 aa		4.88	□□□□□ -1.63
PTC1	YDL006W	LYS21	Q12122	440 aa	Known RBP	4.88	□□□□□ -1.63
PTC1	YDL006W	RPB2	P08518	1224 aa	Known RBP	4.87	□□□□□ -1.63
PTC1	YDL006W	PTC6	P25646	442 aa		4.87	□□□□□ -1.63
PTC1	YDL006W	RFA2	P26754	273 aa	Known RBP	4.87	□□□□□ -1.63
PTC1	YDL006W	SRB5	P32585	307 aa		4.87	□□□□□ -1.63
PTC1	YDL006W	FTH1	P38310	465 aa		4.87	□□□□□ -1.63
PTC1	YDL006W	SHC1	P39000	512 aa		4.87	□□□□□ -1.63
PTC1	YDL006W	ATF1	P40353	525 aa		4.87	□□□□□ -1.63
PTC1	YDL006W	YFH7	P43591	353 aa		4.87	□□□□□ -1.63
PTC1	YDL006W	BPL1	P48445	690 aa	Predicted RBP	4.87	□□□□□ -1.63
PTC1	YDL006W	NUS1	Q12063	375 aa		4.87	□□□□□ -1.63
PTC1	YDL006W	YOL087C	Q99247	1116 aa		4.87	□□□□□ -1.63
PTC1	YDL006W	PMD1	P32634	1753 aa		4.86	□□□□□ -1.63
PTC1	YDL006W	CYB2	P00175	591 aa		4.86	□□□□□ -1.63
PTC1	YDL006W	FUM1	P08417	488 aa	Known RBP	4.86	□□□□□ -1.63
PTC1	YDL006W	PCT1	P13259	424 aa		4.86	□□□□□ -1.63
PTC1	YDL006W	MAK32	P23060	363 aa		4.86	□□□□□ -1.63
PTC1	YDL006W	LCB1	P25045	558 aa	Known RBP	4.86	□□□□□ -1.63
PTC1	YDL006W	ORC2	P32833	620 aa		4.86	□□□□□ -1.63
PTC1	YDL006W	PTK1	P36002	662 aa	Predicted RBP	4.86	□□□□□ -1.63
PTC1	YDL006W	YMR147W	P40218	223 aa	Known RBP	4.86	□□□□□ -1.63
PTC1	YDL006W	ASG1	P40467	964 aa		4.86	□□□□□ -1.63
PTC1	YDL006W	PIB2	P53191	635 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms