RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	SLY1	P22213	666 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	YCL002C	P25565	263 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	TPS2	P31688	896 aa	Known RBP	5.49	□□□□□ -1.53
ROX3	YBL093C	THI4	P32318	326 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	TKL2	P33315	681 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	MRPL7	P36519	292 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	CCL1	P37366	393 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	HMT1	P38074	348 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	APN2	P38207	520 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	YBR053C	P38235	358 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	SHE3	P38272	425 aa	Known RBP	5.49	□□□□□ -1.53
ROX3	YBL093C	CCT2	P39076	527 aa	Known RBP	5.49	□□□□□ -1.53
ROX3	YBL093C	URB2	P47108	1174 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	HLJ1	P48353	224 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	RNT1	Q02555	471 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	SKY1	Q03656	742 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	USA1	Q03714	838 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	SDH5	Q08230	162 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	APC5	Q08683	685 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	GPM2	Q12008	311 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	NBP2	Q12163	236 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	HAL9	Q12180	1030 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	RRD2	Q12461	358 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	AVL9	Q12500	764 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	SEY1	Q99287	776 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	IZH4	Q99393	312 aa		5.49	□□□□□ -1.53
ROX3	YBL093C	CDC24	P11433	854 aa	Predicted RBP	5.48	□□□□□ -1.53
ROX3	YBL093C	ILV6	P25605	309 aa	Known RBP	5.48	□□□□□ -1.53
ROX3	YBL093C	ADK2	P26364	225 aa		5.48	□□□□□ -1.53
ROX3	YBL093C	HXT3	P32466	567 aa	Known RBP	5.48	□□□□□ -1.53
ROX3	YBL093C	RFS1	P38234	210 aa	Known RBP	5.48	□□□□□ -1.53
ROX3	YBL093C	SIF2	P38262	535 aa		5.48	□□□□□ -1.53
ROX3	YBL093C	HSL7	P38274	827 aa		5.48	□□□□□ -1.53
ROX3	YBL093C	FHL1	P39521	936 aa		5.48	□□□□□ -1.53
ROX3	YBL093C	PXA1	P41909	870 aa		5.48	□□□□□ -1.53
ROX3	YBL093C	SHR5	P41912	237 aa		5.48	□□□□□ -1.53
ROX3	YBL093C	CPR6	P53691	371 aa	Known RBP	5.48	□□□□□ -1.53
ROX3	YBL093C	SHR3	Q02774	210 aa		5.48	□□□□□ -1.53
ROX3	YBL093C	OMS1	Q06668	471 aa		5.48	□□□□□ -1.53
ROX3	YBL093C	THI20	Q08224	551 aa		5.48	□□□□□ -1.53
ROX3	YBL093C	DDC1	Q08949	612 aa		5.48	□□□□□ -1.53
ROX3	YBL093C	THI21	Q08975	551 aa		5.48	□□□□□ -1.53
ROX3	YBL093C	RUD3	Q12234	484 aa	Known RBP	5.48	□□□□□ -1.53
ROX3	YBL093C	APM4	Q99186	491 aa		5.48	□□□□□ -1.53
ROX3	YBL093C	UBR1	P19812	1950 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	MGT1	P26188	188 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	GCS1	P35197	352 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	OAF3	P36023	863 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	CAB3	P36076	571 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	RPC37	P36121	282 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	MSR1	P38714	643 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	RIM4	P38741	713 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	VPS41	P38959	992 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	RLP7	P40693	322 aa	Known RBP	5.47	□□□□□ -1.53
ROX3	YBL093C	CDC1	P40986	491 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	YFL052W	P43551	465 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	YFL040W	P43562	540 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	RFX1	P48743	811 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	PEX31	P53203	462 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	ADA2	Q02336	434 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	YMR027W	Q04371	470 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	AIM32	Q04689	311 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	GSF2	Q04697	403 aa	Known RBP	5.47	□□□□□ -1.53
ROX3	YBL093C	HRD3	Q05787	833 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	PIG1	Q06216	648 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	RSC3	Q06639	885 aa		5.47	□□□□□ -1.53
ROX3	YBL093C	CMD1	P06787	147 aa	Known RBP	5.46	□□□□□ -1.54
ROX3	YBL093C	ATP1	P07251	545 aa	Known RBP	5.46	□□□□□ -1.54
ROX3	YBL093C	ILV2	P07342	687 aa	Known RBP	5.46	□□□□□ -1.54
ROX3	YBL093C	IMA3	P0CW40	589 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	IMA4	P0CW41	589 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	POL3	P15436	1097 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	YCR051W	P25631	222 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	PMI40	P29952	429 aa	Known RBP	5.46	□□□□□ -1.54
ROX3	YBL093C	VPH1	P32563	840 aa	Known RBP	5.46	□□□□□ -1.54
ROX3	YBL093C	DSS4	P32601	143 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	DEF1	P35732	738 aa	Known RBP	5.46	□□□□□ -1.54
ROX3	YBL093C	YBR056W	P38081	501 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	DIA4	P38705	446 aa	Predicted RBP	5.46	□□□□□ -1.54
ROX3	YBL093C	PZF1	P39933	429 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	RRT5	P43607	289 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	GUF1	P46943	645 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	SAE2	P46946	345 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	MAL11	P53048	616 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	COG6	P53959	839 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	KTR6	P54070	446 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	BET4	Q00618	327 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	MRS2	Q01926	470 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	IMA2	Q08295	589 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	TAF10	Q12030	206 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	LCB4	Q12246	624 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	HRT3	Q12347	344 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	MDM12	Q92328	271 aa		5.46	□□□□□ -1.54
ROX3	YBL093C	DIF1	O13577	133 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	5.45	□□□□□ -1.54	RIP-Chip
ROX3	YBL093C	RPB2	P08518	1224 aa	Known RBP	5.45	□□□□□ -1.54
ROX3	YBL093C	TSR4	P25040	408 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	MSH2	P25847	964 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	URA7	P28274	579 aa	Known RBP	5.45	□□□□□ -1.54
ROX3	YBL093C	NGG1	P32494	702 aa		5.45	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms