RNA–Protein interactions for RNA: YAR010C

YAR010C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YAR010C, Length 1,323 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAR010C	YAR010C	IRC10	Q08118	586 aa		4.77	□□□□□ -1.65
YAR010C	YAR010C	ULA1	Q12059	462 aa		4.77	□□□□□ -1.65
YAR010C	YAR010C	SFI1	Q12369	946 aa		4.77	□□□□□ -1.65
YAR010C	YAR010C	SNU66	Q12420	587 aa	Predicted RBP	4.77	□□□□□ -1.65
YAR010C	YAR010C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
YAR010C	YAR010C	HOM3	P10869	527 aa		4.76	□□□□□ -1.65
YAR010C	YAR010C	YIH1	P25637	258 aa		4.76	□□□□□ -1.65
YAR010C	YAR010C	GSY2	P27472	705 aa		4.76	□□□□□ -1.65
YAR010C	YAR010C	SOF1	P33750	489 aa	Known RBP	4.76	□□□□□ -1.65
YAR010C	YAR010C	BYE1	P36106	594 aa		4.76	□□□□□ -1.65
YAR010C	YAR010C	AGP2	P38090	596 aa		4.76	□□□□□ -1.65
YAR010C	YAR010C	MRX1	P40050	688 aa		4.76	□□□□□ -1.65
YAR010C	YAR010C	ASG1	P40467	964 aa		4.76	□□□□□ -1.65
YAR010C	YAR010C	IST1	P53843	298 aa	Predicted RBP	4.76	□□□□□ -1.65
YAR010C	YAR010C	YMR155W	Q03795	547 aa		4.76	□□□□□ -1.65
YAR010C	YAR010C	RPC11	Q04307	110 aa	Predicted RBP	4.76	□□□□□ -1.65
YAR010C	YAR010C	RTT109	Q07794	436 aa		4.76	□□□□□ -1.65
YAR010C	YAR010C	BUD7	Q08754	746 aa		4.76	□□□□□ -1.65
YAR010C	YAR010C	ILV2	P07342	687 aa	Known RBP	4.75	□□□□□ -1.65
YAR010C	YAR010C	HEM1	P09950	548 aa	Predicted RBP	4.75	□□□□□ -1.65
YAR010C	YAR010C	PDX1	P16451	410 aa		4.75	□□□□□ -1.65
YAR010C	YAR010C	ORC2	P32833	620 aa		4.75	□□□□□ -1.65
YAR010C	YAR010C	RPC34	P32910	317 aa		4.75	□□□□□ -1.65
YAR010C	YAR010C	LHS1	P36016	881 aa		4.75	□□□□□ -1.65
YAR010C	YAR010C	SNU114	P36048	1008 aa	Known RBP	4.75	□□□□□ -1.65
YAR010C	YAR010C	UIP3	P39547	235 aa		4.75	□□□□□ -1.65
YAR010C	YAR010C	ERV46	P39727	415 aa		4.75	□□□□□ -1.65
YAR010C	YAR010C	PAC2	P39937	518 aa		4.75	□□□□□ -1.65
YAR010C	YAR010C	PKP1	P40530	394 aa		4.75	□□□□□ -1.65
YAR010C	YAR010C	RPS7B	P48164	190 aa	Known RBP	4.75	□□□□□ -1.65
YAR010C	YAR010C	YGR066C	P53242	292 aa		4.75	□□□□□ -1.65
YAR010C	YAR010C	MAK10	Q02197	733 aa		4.75	□□□□□ -1.65
YAR010C	YAR010C	YOL159C	Q08300	171 aa		4.75	□□□□□ -1.65
YAR010C	YAR010C	YOL159C-A	Q3E769	90 aa		4.75	□□□□□ -1.65
YAR010C	YAR010C	RPN13	O13563	156 aa		4.74	□□□□□ -1.65
YAR010C	YAR010C	CHO1	P08456	276 aa		4.74	□□□□□ -1.65
YAR010C	YAR010C	KRS1	P15180	591 aa	Known RBP	4.74	□□□□□ -1.65
YAR010C	YAR010C	VMA8	P32610	256 aa	Known RBP	4.74	□□□□□ -1.65
YAR010C	YAR010C	CST26	P38226	397 aa		4.74	□□□□□ -1.65
YAR010C	YAR010C	REG2	P38232	338 aa		4.74	□□□□□ -1.65
YAR010C	YAR010C	SMF1	P38925	575 aa		4.74	□□□□□ -1.65
YAR010C	YAR010C	BUR6	P40096	142 aa		4.74	□□□□□ -1.65
YAR010C	YAR010C	YFR020W	P43600	232 aa		4.74	□□□□□ -1.65
YAR010C	YAR010C	DPB11	P47027	764 aa	Predicted RBP	4.74	□□□□□ -1.65
YAR010C	YAR010C	RSC1	P53236	928 aa		4.74	□□□□□ -1.65
YAR010C	YAR010C	EFM6	P53970	246 aa		4.74	□□□□□ -1.65
YAR010C	YAR010C	ZDS2	P54786	942 aa		4.74	□□□□□ -1.65
YAR010C	YAR010C	AAT1	Q01802	451 aa		4.74	□□□□□ -1.65
YAR010C	YAR010C	LUC7	Q07508	261 aa	Predicted RBP	4.74	□□□□□ -1.65
YAR010C	YAR010C	INP53	Q12271	1107 aa		4.74	□□□□□ -1.65
YAR010C	YAR010C	HXK2	P04807	486 aa	Known RBP	4.73	□□□□□ -1.65
YAR010C	YAR010C	ADE5,7	P07244	802 aa	Known RBP	4.73	□□□□□ -1.65
YAR010C	YAR010C	VMA16	P23968	213 aa		4.73	□□□□□ -1.65
YAR010C	YAR010C	ADH7	P25377	361 aa		4.73	□□□□□ -1.65
YAR010C	YAR010C	SYN8	P31377	255 aa		4.73	□□□□□ -1.65
YAR010C	YAR010C	TIF3	P34167	436 aa	Known RBP	4.73	□□□□□ -1.65
YAR010C	YAR010C	YKL050C	P35736	922 aa		4.73	□□□□□ -1.65
YAR010C	YAR010C	IMD2	P38697	523 aa	Known RBP	4.73	□□□□□ -1.65
YAR010C	YAR010C	APT1	P49435	187 aa	Known RBP	4.73	□□□□□ -1.65
YAR010C	YAR010C	IMD3	P50095	523 aa	Known RBP	4.73	□□□□□ -1.65
YAR010C	YAR010C	ECM22	Q05958	814 aa	Predicted RBP	4.73	□□□□□ -1.65
YAR010C	YAR010C	MF(ALPHA)1	P01149	165 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	KGD1	P20967	1014 aa	Known RBP	4.72	□□□□□ -1.65
YAR010C	YAR010C	SSE2	P32590	693 aa	Known RBP	4.72	□□□□□ -1.65
YAR010C	YAR010C	VID24	P38263	362 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	FTH1	P38310	465 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	YIL166C	P40445	542 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	QRI1	P43123	477 aa	Known RBP	4.72	□□□□□ -1.65
YAR010C	YAR010C	YML6	P51998	286 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	DIA3	P52290	468 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	BUD22	Q04347	519 aa	Known RBP	4.72	□□□□□ -1.65
YAR010C	YAR010C	VPS38	Q05919	439 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	THI3	Q07471	609 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	RDL1	Q12305	139 aa	Known RBP	4.72	□□□□□ -1.65
YAR010C	YAR010C	PNS1	Q12412	539 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	PUP3	P25451	205 aa	Known RBP	4.72	□□□□□ -1.65
YAR010C	YAR010C	GPI10	P30777	616 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	UBP11	P36026	717 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	TCD2	P36101	447 aa	Known RBP	4.72	□□□□□ -1.65
YAR010C	YAR010C	ELO1	P39540	310 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	LTP1	P40347	161 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	CIN1	P40987	1014 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	YJL043W	P47053	257 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	YNL058C	P53947	316 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	BOP3	P53958	396 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	APM1	Q00776	475 aa	Predicted RBP	4.72	□□□□□ -1.65
YAR010C	YAR010C	MRD1	Q06106	887 aa	Known RBP	4.72	□□□□□ -1.65
YAR010C	YAR010C	YLR455W	Q06188	304 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	FMP40	Q08968	688 aa	Predicted RBP	4.72	□□□□□ -1.65
YAR010C	YAR010C	AVL9	Q12500	764 aa		4.72	□□□□□ -1.65
YAR010C	YAR010C	MRP13	P12686	339 aa		4.71	□□□□□ -1.66
YAR010C	YAR010C	PRD1	P25375	712 aa		4.71	□□□□□ -1.66
YAR010C	YAR010C	MRE11	P32829	692 aa		4.71	□□□□□ -1.66
YAR010C	YAR010C	WBP1	P33767	430 aa	Known RBP	4.71	□□□□□ -1.66
YAR010C	YAR010C	ARP1	P38696	384 aa		4.71	□□□□□ -1.66
YAR010C	YAR010C	IRC8	P47046	822 aa		4.71	□□□□□ -1.66
YAR010C	YAR010C	VID30	P53076	958 aa		4.71	□□□□□ -1.66
YAR010C	YAR010C	YLR345W	Q06137	509 aa		4.71	□□□□□ -1.66
YAR010C	YAR010C	GRC3	Q07845	632 aa		4.71	□□□□□ -1.66
YAR010C	YAR010C	RIM20	Q12033	661 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms