RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 KCNH3Q9ULD8 1083 aa3.88□□□□□ -1.79
RPRD1A-204ENST00000585953 SHOXO15266 292 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 SNW1Q13573 536 aaKnown RBP3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 AXDND1Q5T1B0 1012 aaPredicted RBP3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 CDKAL1Q5VV42 579 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 LARP1BQ659C4 914 aaKnown RBP3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 CCDC144CPQ8IYA2 1237 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 CKAP2LQ8IYA6 745 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 ABI1Q8IZP0 508 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 HSPA12BQ96MM6 686 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 PPP1R1BQ9UD71 204 aaPredicted RBP3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 SNX11Q9Y5W9 270 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 SHISA3A0PJX4 238 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 H3BS24 57 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 PRNPP04156 253 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 TP53P04637 393 aaPredicted RBP3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 SLC7A5Q01650 507 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 RBL2Q08999 1139 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 GNPTABQ3T906 1256 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 DCAF15Q66K64 600 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 VHLLQ6RSH7 139 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 C6orf15Q6UXA7 325 aaPredicted RBP3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 CBLL1Q75N03 491 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 CELF2-AS1Q8N7Q2 184 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 MICAL1Q8TDZ2 1067 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 HRASLS5Q96KN8 279 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 HIRIP3Q9BW71 556 aaPredicted RBP3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 GPR62Q9BZJ7 368 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 DUSP15Q9H1R2 295 aaPredicted RBP3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 SEMA3GQ9NS98 782 aa3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 R3HCC1Q9Y3T6 440 aaKnown RBP3.87□□□□□ -1.79
RPRD1A-204ENST00000585953 PITPNM2Q9BZ72 1349 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 DBX1A6NMT0 343 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 B2RBV5 119 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 CBFA2T2O43439 604 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 SRFP11831 508 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 ITGB5P18084 799 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 PRKCQQ04759 706 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 AUHQ13825 339 aaKnown RBP3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 RAB33AQ14088 237 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 FXNQ16595 210 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 KIAA1211LQ6NV74 962 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 SPOCD1Q6ZMY3 1216 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 TMC3Q7Z5M5 1100 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 C7orf61Q8IZ16 206 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 MISP3Q96FF7 219 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 PRDM14Q9GZV8 571 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 PCDHB12Q9Y5F1 795 aa3.86□□□□□ -1.79
RPRD1A-204ENST00000585953 NMIQ13287 307 aaPredicted RBP3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 NCAPHQ15003 741 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 AOC3Q16853 763 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 NBPF6Q5VWK0 638 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 NFXL1Q6ZNB6 911 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 THAP5Q7Z6K1 395 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 WFDC3Q8IUB2 231 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 FAM178BQ8IXR5 827 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 BCL7CQ8WUZ0 217 aaPredicted RBP3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 UBXN4Q92575 508 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 NBPF4Q96M43 638 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 DNAJC2Q99543 621 aaKnown RBP3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 HAUS7Q99871 368 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 TRIM55Q9BYV6 548 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 CCDC39Q9UFE4 941 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 VAV3Q9UKW4 847 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 GJB6O95452 261 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 CD96P40200 585 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 DDR2Q16832 855 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 ANKRD39Q53RE8 183 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 VSIG10LQ86VR7 867 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 STK11IPQ8N1F8 1099 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 UBE2FQ969M7 185 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 HDAC8Q9BY41 377 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 KLHL25Q9H0H3 589 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 TRIT1Q9H3H1 467 aaKnown RBP3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 ATP13A1Q9HD20 1204 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 GPATCH2Q9NW75 528 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 ZSWIM5Q9P217 1185 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 FBXL21Q9UKT6 434 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 ERCC6L2Q5T890 1561 aa3.85□□□□□ -1.79
RPRD1A-204ENST00000585953 WASH4PA8MWX3 477 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 SIGLEC6O43699 453 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 DDAH1O94760 285 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 PRAMEF1O95521 474 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 EPHX1P07099 455 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 BNIP3Q12983 259 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 GAB4Q2WGN9 574 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 MRM1Q6IN84 353 aaKnown RBP3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 ZNF574Q6ZN55 896 aaPredicted RBP3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 TSPYL5Q86VY4 417 aaPredicted RBP3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 ASB11Q8WXH4 323 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 ASCC2Q9H1I8 757 aaPredicted RBP3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 GP6Q9HCN6 339 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 ST7Q9NRC1 585 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 GFOD1Q9NXC2 390 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 PRR13Q9NZ81 148 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 SUSD2Q9UGT4 822 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 SLC5A6Q9Y289 635 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 ZNF451Q9Y4E5 1061 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 CD247P20963 164 aa3.84□□□□□ -1.79
RPRD1A-204ENST00000585953 TPP2P29144 1249 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms