RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 NEK9Q8TD19 979 aa8.45□□□□□ -1.06
CHD6-209ENST00000482596 ZFRQ96KR1 1074 aaKnown RBP8.45□□□□□ -1.06
CHD6-209ENST00000482596 TOX2Q96NM4 488 aa8.45□□□□□ -1.06
CHD6-209ENST00000482596 PICK1Q9NRD5 415 aa8.45□□□□□ -1.06
CHD6-209ENST00000482596 PRKAG3Q9UGI9 489 aa8.45□□□□□ -1.06
CHD6-209ENST00000482596 SLC4A7Q9Y6M7 1214 aa8.45□□□□□ -1.06
CHD6-209ENST00000482596 DOCK2Q92608 1830 aa8.45□□□□□ -1.06
CHD6-209ENST00000482596 NBEAQ8NFP9 2946 aa8.44□□□□□ -1.06
CHD6-209ENST00000482596 TAF5LO75529 589 aa8.44□□□□□ -1.06
CHD6-209ENST00000482596 ATP2A2P16615 1042 aaKnown RBP8.44□□□□□ -1.06
CHD6-209ENST00000482596 MAPK4P31152 587 aa8.44□□□□□ -1.06
CHD6-209ENST00000482596 ATP2B2Q01814 1243 aa8.44□□□□□ -1.06
CHD6-209ENST00000482596 COL9A3Q14050 684 aaPredicted RBP8.44□□□□□ -1.06
CHD6-209ENST00000482596 SMYD5Q6GMV2 418 aa8.44□□□□□ -1.06
CHD6-209ENST00000482596 MTIF3Q9H2K0 278 aaKnown RBP8.44□□□□□ -1.06
CHD6-209ENST00000482596 TMOD2Q9NZR1 351 aa8.44□□□□□ -1.06
CHD6-209ENST00000482596 FAM198AQ9UFP1 575 aa8.44□□□□□ -1.06
CHD6-209ENST00000482596 HELZ2Q9BYK8 2649 aaKnown RBP8.44□□□□□ -1.06
CHD6-209ENST00000482596 ZBBXA8MT70 800 aa8.43□□□□□ -1.06
CHD6-209ENST00000482596 PDGFBP01127 241 aaPredicted RBP8.43□□□□□ -1.06
CHD6-209ENST00000482596 IGHA2P01877 340 aa8.43□□□□□ -1.06
CHD6-209ENST00000482596 CTSWP56202 376 aa8.43□□□□□ -1.06
CHD6-209ENST00000482596 ZXDAP98168 799 aa8.43□□□□□ -1.06
CHD6-209ENST00000482596 TRIM28Q13263 835 aaKnown RBP8.43□□□□□ -1.06
CHD6-209ENST00000482596 PUS10Q3MIT2 529 aaKnown RBP8.43□□□□□ -1.06
CHD6-209ENST00000482596 PRAMEF19Q5SWL8 479 aa8.43□□□□□ -1.06
CHD6-209ENST00000482596 FKBP1CQ5VVH2 108 aa8.43□□□□□ -1.06
CHD6-209ENST00000482596 APOBEC3HQ6NTF7 200 aaKnown RBP8.43□□□□□ -1.06
CHD6-209ENST00000482596 ZNF804AQ7Z570 1209 aa8.43□□□□□ -1.06
CHD6-209ENST00000482596 CRACR2BQ8N4Y2 399 aaPredicted RBP8.43□□□□□ -1.06
CHD6-209ENST00000482596 PROCA1Q8NCQ7 364 aaPredicted RBP8.43□□□□□ -1.06
CHD6-209ENST00000482596 GPRC5AQ8NFJ5 357 aa8.43□□□□□ -1.06
CHD6-209ENST00000482596 TTLL11Q8NHH1 800 aa8.43□□□□□ -1.06
CHD6-209ENST00000482596 PNISRQ8TF01 805 aaKnown RBP8.43□□□□□ -1.06
CHD6-209ENST00000482596 FAM151AQ8WW52 585 aa8.43□□□□□ -1.06
CHD6-209ENST00000482596 RBPJLQ9UBG7 517 aa8.43□□□□□ -1.06
CHD6-209ENST00000482596 UMODL1Q5DID0 1318 aa8.43□□□□□ -1.06
CHD6-209ENST00000482596 SMAPO00193 183 aa8.42□□□□□ -1.06
CHD6-209ENST00000482596 SEPT4O43236 478 aa8.42□□□□□ -1.06
CHD6-209ENST00000482596 HTATSF1O43719 755 aaKnown RBP8.42□□□□□ -1.06
CHD6-209ENST00000482596 PCCAP05165 728 aaPredicted RBP8.42□□□□□ -1.06
CHD6-209ENST00000482596 HMGCS2P54868 508 aa8.42□□□□□ -1.06
CHD6-209ENST00000482596 CHRNDQ07001 517 aa8.42□□□□□ -1.06
CHD6-209ENST00000482596 RSPO4Q2I0M5 234 aaPredicted RBP8.42□□□□□ -1.06
CHD6-209ENST00000482596 PADI6Q6TGC4 694 aa8.42□□□□□ -1.06
CHD6-209ENST00000482596 TATDN2Q93075 761 aa8.42□□□□□ -1.06
CHD6-209ENST00000482596 VWCEQ96DN2 955 aa8.42□□□□□ -1.06
CHD6-209ENST00000482596 ASIC4Q96FT7 647 aa8.42□□□□□ -1.06
CHD6-209ENST00000482596 ANKRD2Q9GZV1 360 aa8.42□□□□□ -1.06
CHD6-209ENST00000482596 SMG1Q96Q15 3661 aaKnown RBP8.42□□□□□ -1.06
CHD6-209ENST00000482596 PTPRSQ13332 1948 aa8.41□□□□□ -1.06
CHD6-209ENST00000482596 PGK1P00558 417 aa8.41□□□□□ -1.06
CHD6-209ENST00000482596 ERVK-9P63128 1117 aa8.41□□□□□ -1.06
CHD6-209ENST00000482596 ERVK-24P63145 666 aa8.41□□□□□ -1.06
CHD6-209ENST00000482596 NFIAQ12857 509 aa8.41□□□□□ -1.06
CHD6-209ENST00000482596 PTGDRQ13258 359 aa8.41□□□□□ -1.06
CHD6-209ENST00000482596 C15orf52Q6ZUT6 534 aaKnown RBP8.41□□□□□ -1.06
CHD6-209ENST00000482596 ZFPM1Q8IX07 1006 aa8.41□□□□□ -1.06
CHD6-209ENST00000482596 CCAR1Q8IX12 1150 aaKnown RBP8.41□□□□□ -1.06
CHD6-209ENST00000482596 PAGR1Q9BTK6 254 aa8.41□□□□□ -1.06
CHD6-209ENST00000482596 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.41□□□□□ -1.06
CHD6-209ENST00000482596 LMCD1Q9NZU5 365 aa8.41□□□□□ -1.06
CHD6-209ENST00000482596 USP9XQ93008 2570 aaPredicted RBP8.4□□□□□ -1.06
CHD6-209ENST00000482596 OTOGLQ3ZCN5 2332 aa8.4□□□□□ -1.06
CHD6-209ENST00000482596 C3orf80F5H4A9 247 aa8.4□□□□□ -1.06
CHD6-209ENST00000482596 HERVK_113P62684 666 aa8.4□□□□□ -1.06
CHD6-209ENST00000482596 SPP2Q13103 211 aa8.4□□□□□ -1.06
CHD6-209ENST00000482596 PABPC4Q13310 644 aaKnown RBP eCLIP8.4□□□□□ -1.06
CHD6-209ENST00000482596 MCTP2Q6DN12 878 aa8.4□□□□□ -1.06
CHD6-209ENST00000482596 NUDT18Q6ZVK8 323 aa8.4□□□□□ -1.06
CHD6-209ENST00000482596 TTC13Q8NBP0 860 aa8.4□□□□□ -1.06
CHD6-209ENST00000482596 TEKT1Q969V4 418 aa8.4□□□□□ -1.06
CHD6-209ENST00000482596 ZDHHC15Q96MV8 337 aa8.4□□□□□ -1.06
CHD6-209ENST00000482596 CHPF2Q9P2E5 772 aa8.4□□□□□ -1.06
CHD6-209ENST00000482596 ATAD5Q96QE3 1844 aa8.4□□□□□ -1.07
CHD6-209ENST00000482596 ADRB1P08588 477 aa8.39□□□□□ -1.07
CHD6-209ENST00000482596 HOXC6P09630 235 aa8.39□□□□□ -1.07
CHD6-209ENST00000482596 HSP90B1P14625 803 aaKnown RBP8.39□□□□□ -1.07
CHD6-209ENST00000482596 IGHMBP2P38935 993 aaKnown RBP8.39□□□□□ -1.07
CHD6-209ENST00000482596 CCL23P55773 120 aa8.39□□□□□ -1.07
CHD6-209ENST00000482596 IRX3P78415 501 aaPredicted RBP8.39□□□□□ -1.07
CHD6-209ENST00000482596 SIGLEC14Q08ET2 396 aa8.39□□□□□ -1.07
CHD6-209ENST00000482596 TTLL4Q14679 1199 aa8.39□□□□□ -1.07
CHD6-209ENST00000482596 EP400NLQ6ZTU2 488 aa8.39□□□□□ -1.07
CHD6-209ENST00000482596 CWC22Q9HCG8 908 aaKnown RBP8.39□□□□□ -1.07
CHD6-209ENST00000482596 XPNPEP3Q9NQH7 507 aa8.39□□□□□ -1.07
CHD6-209ENST00000482596 STARD7Q9NQZ5 370 aa8.39□□□□□ -1.07
CHD6-209ENST00000482596 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.39□□□□□ -1.07
CHD6-209ENST00000482596 MTUS1Q9ULD2 1270 aa8.39□□□□□ -1.07
CHD6-209ENST00000482596 SCN5AQ14524 2016 aa8.39□□□□□ -1.07
CHD6-209ENST00000482596 CEP295Q9C0D2 2601 aa8.38□□□□□ -1.07
CHD6-209ENST00000482596 RFX7Q2KHR2 1363 aa8.38□□□□□ -1.07
CHD6-209ENST00000482596 LCHNA4D1U4 455 aa8.38□□□□□ -1.07
CHD6-209ENST00000482596 HDLBPQ00341 1268 aaKnown RBP8.38□□□□□ -1.07
CHD6-209ENST00000482596 WDR78Q5VTH9 848 aa8.38□□□□□ -1.07
CHD6-209ENST00000482596 TMEM105Q8N8V8 129 aa8.38□□□□□ -1.07
CHD6-209ENST00000482596 LENG1Q96BZ8 264 aaPredicted RBP8.38□□□□□ -1.07
CHD6-209ENST00000482596 MYD88Q99836 296 aa8.38□□□□□ -1.07
CHD6-209ENST00000482596 SUGCTQ9HAC7 445 aa8.38□□□□□ -1.07
CHD6-209ENST00000482596 PLA2G2EQ9NZK7 142 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 203.5 ms