RNA–Protein interactions for RNA: YPL275W

FDH2, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH2, Length 711 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH2	YPL275W	RIT1	P23796	513 aa		4.13	□□□□□ -1.75
FDH2	YPL275W	SWI4	P25302	1093 aa	Known RBP	4.13	□□□□□ -1.75
FDH2	YPL275W	MTG2	P38860	518 aa		4.13	□□□□□ -1.75
FDH2	YPL275W	LNP1	P38878	278 aa		4.13	□□□□□ -1.75
FDH2	YPL275W	CAB2	P40506	365 aa		4.13	□□□□□ -1.75
FDH2	YPL275W	TAN1	P53072	289 aa	Predicted RBP	4.13	□□□□□ -1.75
FDH2	YPL275W	TAM41	P53230	385 aa		4.13	□□□□□ -1.75
FDH2	YPL275W	TRM44	Q02648	567 aa	Known RBP	4.13	□□□□□ -1.75
FDH2	YPL275W	RSC9	Q03124	581 aa		4.13	□□□□□ -1.75
FDH2	YPL275W	YML053C	Q04978	212 aa		4.13	□□□□□ -1.75
FDH2	YPL275W	ORM2	Q06144	216 aa		4.13	□□□□□ -1.75
FDH2	YPL275W	ALE1	Q08548	619 aa		4.13	□□□□□ -1.75
FDH2	YPL275W	LYS21	Q12122	440 aa	Known RBP	4.13	□□□□□ -1.75
FDH2	YPL275W	PNO1	Q99216	274 aa	Known RBP	4.13	□□□□□ -1.75
FDH2	YPL275W	ADE3	P07245	946 aa	Known RBP	4.12	□□□□□ -1.75
FDH2	YPL275W	POL3	P15436	1097 aa		4.12	□□□□□ -1.75
FDH2	YPL275W	PDE1	P22434	369 aa		4.12	□□□□□ -1.75
FDH2	YPL275W	ECM32	P32644	1121 aa	Known RBP	4.12	□□□□□ -1.75
FDH2	YPL275W	YBR138C	P38277	524 aa		4.12	□□□□□ -1.75
FDH2	YPL275W	FTH1	P38310	465 aa		4.12	□□□□□ -1.75
FDH2	YPL275W	RPT2	P40327	437 aa	Known RBP	4.12	□□□□□ -1.75
FDH2	YPL275W	XBP1	P40489	647 aa		4.12	□□□□□ -1.75
FDH2	YPL275W	NNF2	P53253	936 aa		4.12	□□□□□ -1.75
FDH2	YPL275W	YPL191C	Q08930	360 aa		4.12	□□□□□ -1.75
FDH2	YPL275W	SUL2	Q12325	893 aa		4.12	□□□□□ -1.75
FDH2	YPL275W	HPR1	P17629	752 aa	Known RBP	4.11	□□□□□ -1.75
FDH2	YPL275W	ARP2	P32381	391 aa	Known RBP	4.11	□□□□□ -1.75
FDH2	YPL275W	VBA2	P38358	474 aa	Known RBP	4.11	□□□□□ -1.75
FDH2	YPL275W	IMD2	P38697	523 aa	Known RBP	4.11	□□□□□ -1.75
FDH2	YPL275W	BUD16	P39988	312 aa		4.11	□□□□□ -1.75
FDH2	YPL275W	UBP7	P40453	1071 aa		4.11	□□□□□ -1.75
FDH2	YPL275W	PSA1	P41940	361 aa	Known RBP	4.11	□□□□□ -1.75
FDH2	YPL275W	IMD3	P50095	523 aa	Known RBP	4.11	□□□□□ -1.75
FDH2	YPL275W	VPS4	P52917	437 aa		4.11	□□□□□ -1.75
FDH2	YPL275W	YGR117C	P53270	476 aa		4.11	□□□□□ -1.75
FDH2	YPL275W	PAP2	P53632	584 aa	Known RBP	4.11	□□□□□ -1.75
FDH2	YPL275W	UBX4	P54730	416 aa		4.11	□□□□□ -1.75
FDH2	YPL275W	GTB1	Q04924	702 aa		4.11	□□□□□ -1.75
FDH2	YPL275W	CIA1	Q05583	330 aa		4.11	□□□□□ -1.75
FDH2	YPL275W	PRS5	Q12265	496 aa	Known RBP	4.11	□□□□□ -1.75
FDH2	YPL275W	CSR2	Q12734	1121 aa		4.11	□□□□□ -1.75
FDH2	YPL275W	HKR1	P41809	1802 aa		4.11	□□□□□ -1.75
FDH2	YPL275W	URK1	P27515	501 aa		4.1	□□□□□ -1.75
FDH2	YPL275W	YMR124W	P39523	943 aa	Known RBP	4.1	□□□□□ -1.75
FDH2	YPL275W	ERV46	P39727	415 aa		4.1	□□□□□ -1.75
FDH2	YPL275W	SNO3	P43544	222 aa		4.1	□□□□□ -1.75
FDH2	YPL275W	NET1	P47035	1189 aa		4.1	□□□□□ -1.75
FDH2	YPL275W	YGR079W	P53249	370 aa		4.1	□□□□□ -1.75
FDH2	YPL275W	IDP3	P53982	420 aa	Known RBP	4.1	□□□□□ -1.75
FDH2	YPL275W	YPL108W	Q02872	168 aa	Predicted RBP	4.1	□□□□□ -1.75
FDH2	YPL275W	SYF1	Q04048	859 aa	Predicted RBP	4.1	□□□□□ -1.75
FDH2	YPL275W	ARA2	Q04212	335 aa		4.1	□□□□□ -1.75
FDH2	YPL275W	SSP2	Q08646	371 aa		4.1	□□□□□ -1.75
FDH2	YPL275W	MIS1	P09440	975 aa	Known RBP	4.09	□□□□□ -1.75
FDH2	YPL275W	PGI1	P12709	554 aa	Known RBP	4.09	□□□□□ -1.75
FDH2	YPL275W	MSH1	P25846	959 aa		4.09	□□□□□ -1.75
FDH2	YPL275W	GSH1	P32477	678 aa		4.09	□□□□□ -1.75
FDH2	YPL275W	HES1	P35843	434 aa		4.09	□□□□□ -1.75
FDH2	YPL275W	RPF2	P36160	344 aa	Known RBP	4.09	□□□□□ -1.75
FDH2	YPL275W	STV1	P37296	890 aa		4.09	□□□□□ -1.75
FDH2	YPL275W	FSH1	P38777	243 aa	Known RBP	4.09	□□□□□ -1.75
FDH2	YPL275W	ACA1	P39970	489 aa		4.09	□□□□□ -1.75
FDH2	YPL275W	PUG1	P40100	303 aa		4.09	□□□□□ -1.75
FDH2	YPL275W	CIN1	P40987	1014 aa		4.09	□□□□□ -1.75
FDH2	YPL275W	NPA3	P47122	385 aa		4.09	□□□□□ -1.75
FDH2	YPL275W	RTS3	P53289	263 aa		4.09	□□□□□ -1.75
FDH2	YPL275W	ERG13	P54839	491 aa	Known RBP	4.09	□□□□□ -1.75
FDH2	YPL275W	YAT1	P80235	687 aa		4.09	□□□□□ -1.75
FDH2	YPL275W	YPL071C	Q02864	156 aa		4.09	□□□□□ -1.75
FDH2	YPL275W	TPO3	Q06451	622 aa		4.09	□□□□□ -1.75
FDH2	YPL275W	AFT2	Q08957	416 aa		4.09	□□□□□ -1.75
FDH2	YPL275W	BI2	P03873	423 aa		4.08	□□□□□ -1.76
FDH2	YPL275W	PET122	P10355	254 aa		4.08	□□□□□ -1.76
FDH2	YPL275W	APA1	P16550	321 aa	Known RBP	4.08	□□□□□ -1.76
FDH2	YPL275W	NCP1	P16603	691 aa	Known RBP	4.08	□□□□□ -1.76
FDH2	YPL275W	SEC18	P18759	758 aa	Known RBP	4.08	□□□□□ -1.76
FDH2	YPL275W	URE2	P23202	354 aa	Known RBP	4.08	□□□□□ -1.76
FDH2	YPL275W	PTP1	P25044	335 aa		4.08	□□□□□ -1.76
FDH2	YPL275W	LTV1	P34078	463 aa		4.08	□□□□□ -1.76
FDH2	YPL275W	GEX2	P36173	615 aa		4.08	□□□□□ -1.76
FDH2	YPL275W	VPS27	P40343	622 aa	Known RBP	4.08	□□□□□ -1.76
FDH2	YPL275W	YJR008W	P47085	338 aa		4.08	□□□□□ -1.76
FDH2	YPL275W	RRT6	P53117	311 aa	Predicted RBP	4.08	□□□□□ -1.76
FDH2	YPL275W	ARC35	P53731	342 aa	Known RBP	4.08	□□□□□ -1.76
FDH2	YPL275W	YNL058C	P53947	316 aa		4.08	□□□□□ -1.76
FDH2	YPL275W	VAM6	Q07468	1049 aa		4.08	□□□□□ -1.76
FDH2	YPL275W	YMR085W	P0CF18	432 aa		4.07	□□□□□ -1.76
FDH2	YPL275W	PHO81	P17442	1178 aa		4.07	□□□□□ -1.76
FDH2	YPL275W	YCL049C	P25577	312 aa		4.07	□□□□□ -1.76
FDH2	YPL275W	APE3	P37302	537 aa	Known RBP	4.07	□□□□□ -1.76
FDH2	YPL275W	PHM8	P40025	321 aa		4.07	□□□□□ -1.76
FDH2	YPL275W	TPM2	P40414	161 aa		4.07	□□□□□ -1.76
FDH2	YPL275W	STP1	Q00947	519 aa		4.07	□□□□□ -1.76
FDH2	YPL275W	ATG21	Q02887	496 aa		4.07	□□□□□ -1.76
FDH2	YPL275W	TFC6	Q06339	672 aa		4.07	□□□□□ -1.76
FDH2	YPL275W	GET3	Q12154	354 aa	Known RBP	4.07	□□□□□ -1.76
FDH2	YPL275W	RRG1	Q12167	365 aa	Predicted RBP	4.07	□□□□□ -1.76
FDH2	YPL275W	CRC1	Q12289	327 aa		4.07	□□□□□ -1.76
FDH2	YPL275W	VPS13	Q07878	3144 aa		4.06	□□□□□ -1.76
FDH2	YPL275W	SSK22	P25390	1331 aa	Predicted RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms