RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	BI2	P03873	423 aa		4.39	□□□□□ -1.71
YTM1	YOR272W	PET122	P10355	254 aa		4.39	□□□□□ -1.71
YTM1	YOR272W	SWI4	P25302	1093 aa	Known RBP	4.39	□□□□□ -1.71
YTM1	YOR272W	GSY2	P27472	705 aa		4.39	□□□□□ -1.71
YTM1	YOR272W	DBF20	P32328	564 aa		4.39	□□□□□ -1.71
YTM1	YOR272W	PUP2	P32379	260 aa		4.39	□□□□□ -1.71
YTM1	YOR272W	GCD7	P32502	381 aa	Predicted RBP	4.39	□□□□□ -1.71
YTM1	YOR272W	SIP1	P32578	815 aa		4.39	□□□□□ -1.71
YTM1	YOR272W	NPR3	P38742	1146 aa		4.39	□□□□□ -1.71
YTM1	YOR272W	VPS8	P39702	1274 aa		4.39	□□□□□ -1.71
YTM1	YOR272W	TRS130	Q03660	1102 aa		4.39	□□□□□ -1.71
YTM1	YOR272W	YPL191C	Q08930	360 aa		4.39	□□□□□ -1.71
YTM1	YOR272W	SNF2	P22082	1703 aa		4.38	□□□□□ -1.71
YTM1	YOR272W	SUP35	P05453	685 aa	Known RBP	4.38	□□□□□ -1.71
YTM1	YOR272W	ERG11	P10614	530 aa		4.38	□□□□□ -1.71
YTM1	YOR272W	APA1	P16550	321 aa	Known RBP	4.38	□□□□□ -1.71
YTM1	YOR272W	ZUO1	P32527	433 aa	Known RBP	4.38	□□□□□ -1.71
YTM1	YOR272W	MRS6	P32864	603 aa	Known RBP	4.38	□□□□□ -1.71
YTM1	YOR272W	BST1	P43571	1029 aa		4.38	□□□□□ -1.71
YTM1	YOR272W	MRPL13	Q02204	264 aa		4.38	□□□□□ -1.71
YTM1	YOR272W	PLM2	Q04383	521 aa		4.38	□□□□□ -1.71
YTM1	YOR272W	HRD3	Q05787	833 aa		4.38	□□□□□ -1.71
YTM1	YOR272W	RDL1	Q12305	139 aa	Known RBP	4.38	□□□□□ -1.71
YTM1	YOR272W	SUL2	Q12325	893 aa		4.38	□□□□□ -1.71
YTM1	YOR272W	AUS1	Q08409	1394 aa		4.38	□□□□□ -1.71
YTM1	YOR272W	RSF2	P46974	1380 aa		4.37	□□□□□ -1.71
YTM1	YOR272W	NUC1	P08466	329 aa		4.37	□□□□□ -1.71
YTM1	YOR272W	RRP43	P25359	394 aa	Predicted RBP	4.37	□□□□□ -1.71
YTM1	YOR272W	MPE1	P35728	441 aa	Known RBP	4.37	□□□□□ -1.71
YTM1	YOR272W	GDT1	P38301	280 aa	Predicted RBP	4.37	□□□□□ -1.71
YTM1	YOR272W	IES5	P40060	125 aa		4.37	□□□□□ -1.71
YTM1	YOR272W	PSF2	P40359	213 aa		4.37	□□□□□ -1.71
YTM1	YOR272W	SAP185	P40856	1058 aa		4.37	□□□□□ -1.71
YTM1	YOR272W	SAE2	P46946	345 aa		4.37	□□□□□ -1.71
YTM1	YOR272W	MPP10	P47083	593 aa	Known RBP	4.37	□□□□□ -1.71
YTM1	YOR272W	NPA3	P47122	385 aa		4.37	□□□□□ -1.71
YTM1	YOR272W	YGL082W	P53155	381 aa		4.37	□□□□□ -1.71
YTM1	YOR272W	SEG1	Q04279	960 aa		4.37	□□□□□ -1.71
YTM1	YOR272W	YML053C	Q04978	212 aa		4.37	□□□□□ -1.71
YTM1	YOR272W	CIA1	Q05583	330 aa		4.37	□□□□□ -1.71
YTM1	YOR272W	THI7	Q05998	598 aa		4.37	□□□□□ -1.71
YTM1	YOR272W	SPN1	Q06505	410 aa	Predicted RBP	4.37	□□□□□ -1.71
YTM1	YOR272W	CYK3	Q07533	885 aa		4.37	□□□□□ -1.71
YTM1	YOR272W	TLG2	Q08144	397 aa		4.37	□□□□□ -1.71
YTM1	YOR272W	YRF1-3	P0CX14	1859 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	YRF1-7	P0CX15	1859 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	YRF1-6	P53819	1859 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	APC1	P53886	1748 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	TY1B-A	O13527	1196 aa	Known RBP	4.36	□□□□□ -1.71
YTM1	YOR272W	PGK1	P00560	416 aa	Known RBP	4.36	□□□□□ -1.71
YTM1	YOR272W	YCL049C	P25577	312 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	DPH5	P32469	300 aa	Predicted RBP	4.36	□□□□□ -1.71
YTM1	YOR272W	XRS2	P33301	854 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	KES1	P35844	434 aa	Known RBP	4.36	□□□□□ -1.71
YTM1	YOR272W	OLA1	P38219	394 aa	Known RBP	4.36	□□□□□ -1.71
YTM1	YOR272W	YBR138C	P38277	524 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	VBA2	P38358	474 aa	Known RBP	4.36	□□□□□ -1.71
YTM1	YOR272W	SAP1	P39955	897 aa	Known RBP	4.36	□□□□□ -1.71
YTM1	YOR272W	VID30	P53076	958 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	YGR021W	P53212	290 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	MTG1	Q03151	367 aa	Predicted RBP	4.36	□□□□□ -1.71
YTM1	YOR272W	GTB1	Q04924	702 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	BSP1	Q06604	576 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	YPL225W	Q08971	146 aa	Known RBP	4.36	□□□□□ -1.71
YTM1	YOR272W	NFI1	Q12216	726 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	YKL068W-A	Q3E826	78 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	Q0010	Q9ZZX9	128 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	YIL177C	P40434	1758 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	YJL225C	P40889	1758 aa		4.36	□□□□□ -1.71
YTM1	YOR272W	DAL5	P15365	543 aa		4.35	□□□□□ -1.71
YTM1	YOR272W	NCP1	P16603	691 aa	Known RBP	4.35	□□□□□ -1.71
YTM1	YOR272W	KAR3	P17119	729 aa		4.35	□□□□□ -1.71
YTM1	YOR272W	APN1	P22936	367 aa		4.35	□□□□□ -1.71
YTM1	YOR272W	SEC14	P24280	304 aa	Known RBP	4.35	□□□□□ -1.71
YTM1	YOR272W	URK1	P27515	501 aa		4.35	□□□□□ -1.71
YTM1	YOR272W	PSO2	P30620	661 aa		4.35	□□□□□ -1.71
YTM1	YOR272W	MFT1	P33441	392 aa	Known RBP	4.35	□□□□□ -1.71
YTM1	YOR272W	NUP120	P35729	1037 aa		4.35	□□□□□ -1.71
YTM1	YOR272W	RIO2	P40160	425 aa	Known RBP	4.35	□□□□□ -1.71
YTM1	YOR272W	IAH1	P41734	238 aa		4.35	□□□□□ -1.71
YTM1	YOR272W	SMK1	P41808	388 aa		4.35	□□□□□ -1.71
YTM1	YOR272W	ATP23	P53722	227 aa		4.35	□□□□□ -1.71
YTM1	YOR272W	ARP5	P53946	755 aa		4.35	□□□□□ -1.71
YTM1	YOR272W	YAT1	P80235	687 aa		4.35	□□□□□ -1.71
YTM1	YOR272W	GYL1	Q04322	720 aa		4.35	□□□□□ -1.71
YTM1	YOR272W	NDL1	Q06568	189 aa		4.35	□□□□□ -1.71
YTM1	YOR272W	ATG23	Q06671	453 aa		4.35	□□□□□ -1.71
YTM1	YOR272W	PNO1	Q99216	274 aa	Known RBP	4.35	□□□□□ -1.71
YTM1	YOR272W	MTF2	P10849	440 aa		4.34	□□□□□ -1.71
YTM1	YOR272W	DPB3	P27344	201 aa		4.34	□□□□□ -1.71
YTM1	YOR272W	RAD16	P31244	790 aa		4.34	□□□□□ -1.71
YTM1	YOR272W	RFC1	P38630	861 aa	Known RBP	4.34	□□□□□ -1.71
YTM1	YOR272W	ERC1	P38767	581 aa		4.34	□□□□□ -1.71
YTM1	YOR272W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
YTM1	YOR272W	ZAP1	P47043	880 aa		4.34	□□□□□ -1.71
YTM1	YOR272W	UBX6	P47049	396 aa		4.34	□□□□□ -1.71
YTM1	YOR272W	HST1	P53685	503 aa		4.34	□□□□□ -1.71
YTM1	YOR272W	ARC35	P53731	342 aa	Known RBP	4.34	□□□□□ -1.71
YTM1	YOR272W	HIF1	Q12373	385 aa		4.34	□□□□□ -1.71
YTM1	YOR272W	MLP1	Q02455	1875 aa	Known RBP	4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms