RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C YLR345WQ06137 509 aa5.5□□□□□ -1.53
VPS1YKR001C WHI4Q07655 649 aaKnown RBP5.5□□□□□ -1.53
VPS1YKR001C HOS1Q12214 470 aa5.5□□□□□ -1.53
VPS1YKR001C HSH49Q99181 213 aaPredicted RBP5.5□□□□□ -1.53
VPS1YKR001C YLR422WQ06409 1932 aa5.5□□□□□ -1.53
VPS1YKR001C DAL81P21657 970 aa5.5□□□□□ -1.53
VPS1YKR001C GRR1P24814 1151 aa5.5□□□□□ -1.53
VPS1YKR001C PTP2P29461 750 aa5.5□□□□□ -1.53
VPS1YKR001C SEC1P30619 724 aaKnown RBP5.5□□□□□ -1.53
VPS1YKR001C LOT5P34234 306 aa5.5□□□□□ -1.53
VPS1YKR001C TPO5P36029 618 aa5.5□□□□□ -1.53
VPS1YKR001C MRPL7P36519 292 aa5.5□□□□□ -1.53
VPS1YKR001C AAP1P37898 856 aaKnown RBP5.5□□□□□ -1.53
VPS1YKR001C APM2P38700 605 aa5.5□□□□□ -1.53
VPS1YKR001C PTC2P39966 464 aaKnown RBP5.5□□□□□ -1.53
VPS1YKR001C GIM4P40005 111 aaKnown RBP5.5□□□□□ -1.53
VPS1YKR001C RPL34BP40525 121 aaKnown RBP5.5□□□□□ -1.53
VPS1YKR001C GUS1P46655 708 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
VPS1YKR001C YKE2P52553 114 aa5.5□□□□□ -1.53
VPS1YKR001C TRS120Q04183 1289 aa5.5□□□□□ -1.53
VPS1YKR001C MYO5Q04439 1219 aaKnown RBP5.5□□□□□ -1.53
VPS1YKR001C GIM5Q04493 163 aa5.5□□□□□ -1.53
VPS1YKR001C MLC2Q06580 163 aa5.5□□□□□ -1.53
VPS1YKR001C MRL1Q06815 381 aa5.5□□□□□ -1.53
VPS1YKR001C YLL007CQ07799 665 aa5.5□□□□□ -1.53
VPS1YKR001C YEL077CQ3E7X8 1277 aa5.5□□□□□ -1.53
VPS1YKR001C IPP1P00817 287 aaKnown RBP5.49□□□□□ -1.53
VPS1YKR001C CPA2P03965 1118 aaKnown RBP5.49□□□□□ -1.53
VPS1YKR001C WHI2P12611 486 aa5.49□□□□□ -1.53
VPS1YKR001C CDC42P19073 191 aa5.49□□□□□ -1.53
VPS1YKR001C CKI1P20485 582 aa5.49□□□□□ -1.53
VPS1YKR001C GIT1P25346 518 aa5.49□□□□□ -1.53
VPS1YKR001C CWH43P25618 953 aa5.49□□□□□ -1.53
VPS1YKR001C DBF20P32328 564 aa5.49□□□□□ -1.53
VPS1YKR001C PDB1P32473 366 aaKnown RBP5.49□□□□□ -1.53
VPS1YKR001C ELP2P42935 788 aa5.49□□□□□ -1.53
VPS1YKR001C LOH1P47055 219 aa5.49□□□□□ -1.53
VPS1YKR001C YJR054WP47114 497 aa5.49□□□□□ -1.53
VPS1YKR001C ARI1P53111 347 aaKnown RBP5.49□□□□□ -1.53
VPS1YKR001C RBG2P53295 368 aaKnown RBP5.49□□□□□ -1.53
VPS1YKR001C YNR061CP53747 219 aa5.49□□□□□ -1.53
VPS1YKR001C PRO2P54885 456 aaKnown RBP5.49□□□□□ -1.53
VPS1YKR001C ARP4P80428 489 aa5.49□□□□□ -1.53
VPS1YKR001C YMR010WQ03687 405 aa5.49□□□□□ -1.53
VPS1YKR001C FAL1Q12099 399 aaKnown RBP5.49□□□□□ -1.53
VPS1YKR001C MED2Q12124 431 aa5.49□□□□□ -1.53
VPS1YKR001C ATG9Q12142 997 aa5.49□□□□□ -1.53
VPS1YKR001C CBP6P07253 162 aaPredicted RBP5.48□□□□□ -1.53
VPS1YKR001C CHS1P08004 1131 aa5.48□□□□□ -1.53
VPS1YKR001C RAD54P32863 898 aa5.48□□□□□ -1.53
VPS1YKR001C LRG1P35688 1017 aa5.48□□□□□ -1.53
VPS1YKR001C TDA11P38854 504 aa5.48□□□□□ -1.53
VPS1YKR001C HMF1P40037 129 aaKnown RBP5.48□□□□□ -1.53
VPS1YKR001C DDI1P40087 428 aa5.48□□□□□ -1.53
VPS1YKR001C PIG2P40187 538 aa5.48□□□□□ -1.53
VPS1YKR001C MRM2P53123 320 aa5.48□□□□□ -1.53
VPS1YKR001C RCF2P53721 224 aa5.48□□□□□ -1.53
VPS1YKR001C YNR068CP53754 272 aa5.48□□□□□ -1.53
VPS1YKR001C CAF120P53836 1060 aa5.48□□□□□ -1.53
VPS1YKR001C CNM67P53865 581 aaKnown RBP5.48□□□□□ -1.53
VPS1YKR001C SLU7Q02775 382 aaKnown RBP5.48□□□□□ -1.53
VPS1YKR001C URC2Q04411 772 aa5.48□□□□□ -1.53
VPS1YKR001C ESA1Q08649 445 aa5.48□□□□□ -1.53
VPS1YKR001C VPS54Q12071 889 aa5.48□□□□□ -1.53
VPS1YKR001C RBD2Q12270 262 aa5.48□□□□□ -1.53
VPS1YKR001C MDY2Q12285 212 aa5.48□□□□□ -1.53
VPS1YKR001C SNU23Q12368 194 aaPredicted RBP5.48□□□□□ -1.53
VPS1YKR001C GIS3Q12418 502 aa5.48□□□□□ -1.53
VPS1YKR001C APA1P16550 321 aaKnown RBP5.48□□□□□ -1.53
VPS1YKR001C PRP9P19736 530 aaKnown RBP5.48□□□□□ -1.53
VPS1YKR001C CBP3P21560 335 aa5.48□□□□□ -1.53
VPS1YKR001C AEP2P22136 580 aa5.48□□□□□ -1.53
VPS1YKR001C VMA16P23968 213 aa5.48□□□□□ -1.53
VPS1YKR001C SED4P25365 1065 aa5.48□□□□□ -1.53
VPS1YKR001C MSS51P32335 436 aa5.48□□□□□ -1.53
VPS1YKR001C PCH2P38126 564 aa5.48□□□□□ -1.53
VPS1YKR001C FES1P38260 290 aa5.48□□□□□ -1.53
VPS1YKR001C RPH1P39956 796 aa5.48□□□□□ -1.53
VPS1YKR001C PCL6P40038 420 aa5.48□□□□□ -1.53
VPS1YKR001C OSW5P40219 148 aa5.48□□□□□ -1.53
VPS1YKR001C ICE2P40499 491 aa5.48□□□□□ -1.53
VPS1YKR001C UFE1P41834 346 aa5.48□□□□□ -1.53
VPS1YKR001C HDA1P53973 706 aa5.48□□□□□ -1.53
VPS1YKR001C SPP1Q03012 353 aa5.48□□□□□ -1.53
VPS1YKR001C BRE4Q07660 1125 aa5.48□□□□□ -1.53
VPS1YKR001C YCL001W-BQ96VH2 84 aa5.48□□□□□ -1.53
VPS1YKR001C PHO5P00635 467 aa5.47□□□□□ -1.53
VPS1YKR001C CHS2P14180 963 aa5.47□□□□□ -1.53
VPS1YKR001C COX11P19516 300 aaKnown RBP5.47□□□□□ -1.53
VPS1YKR001C IME1P21190 360 aa5.47□□□□□ -1.53
VPS1YKR001C MAK31P23059 88 aa5.47□□□□□ -1.53
VPS1YKR001C URE2P23202 354 aaKnown RBP5.47□□□□□ -1.53
VPS1YKR001C SUV3P32580 737 aa5.47□□□□□ -1.53
VPS1YKR001C SEC61P32915 480 aa5.47□□□□□ -1.53
VPS1YKR001C TVP38P36164 337 aa5.47□□□□□ -1.53
VPS1YKR001C ADE17P38009 592 aaKnown RBP5.47□□□□□ -1.53
VPS1YKR001C GIP1P38229 639 aa5.47□□□□□ -1.53
VPS1YKR001C XDJ1P39102 459 aa5.47□□□□□ -1.53
VPS1YKR001C SCS2P40075 244 aaKnown RBP5.47□□□□□ -1.53
VPS1YKR001C KHA1P40309 873 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms