RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C MRS6P32864 603 aaKnown RBP3.59□□□□□ -1.83
VPS53YJL029C STO1P34160 861 aaKnown RBP3.59□□□□□ -1.83
VPS53YJL029C PEX5P35056 612 aa3.59□□□□□ -1.83
VPS53YJL029C ALY1P36117 915 aa3.59□□□□□ -1.83
VPS53YJL029C YSW1P38280 609 aa3.59□□□□□ -1.83
VPS53YJL029C YMR134WP40207 237 aa3.59□□□□□ -1.83
VPS53YJL029C RGD2P43556 714 aa3.59□□□□□ -1.83
VPS53YJL029C SUM1P46676 1062 aa3.59□□□□□ -1.83
VPS53YJL029C RPC17P47076 161 aa3.59□□□□□ -1.83
VPS53YJL029C COG7P53195 279 aa3.59□□□□□ -1.83
VPS53YJL029C SWC4P53201 476 aa3.59□□□□□ -1.83
VPS53YJL029C YGR127WP53275 312 aa3.59□□□□□ -1.83
VPS53YJL029C SWS2P53937 143 aa3.59□□□□□ -1.83
VPS53YJL029C BOP3P53958 396 aa3.59□□□□□ -1.83
VPS53YJL029C TRM82Q03774 444 aa3.59□□□□□ -1.83
VPS53YJL029C TDA9Q04545 1251 aa3.59□□□□□ -1.83
VPS53YJL029C ARP9Q05123 467 aa3.59□□□□□ -1.83
VPS53YJL029C CIA1Q05583 330 aa3.59□□□□□ -1.83
VPS53YJL029C ECI1Q05871 280 aa3.59□□□□□ -1.83
VPS53YJL029C BLS1Q06071 122 aa3.59□□□□□ -1.83
VPS53YJL029C ESC2Q06340 456 aa3.59□□□□□ -1.83
VPS53YJL029C GNT1Q12096 491 aa3.59□□□□□ -1.83
VPS53YJL029C RIO1Q12196 484 aaKnown RBP3.59□□□□□ -1.83
VPS53YJL029C AI5_ALPHAQ9ZZX1 630 aa3.59□□□□□ -1.83
VPS53YJL029C COX5AP00424 153 aa3.59□□□□□ -1.84
VPS53YJL029C PHO4P07270 312 aaKnown RBP3.59□□□□□ -1.84
VPS53YJL029C YML002WP0CF17 737 aa3.59□□□□□ -1.84
VPS53YJL029C TSR4P25040 408 aa3.59□□□□□ -1.84
VPS53YJL029C SPS19P32573 292 aaKnown RBP3.59□□□□□ -1.84
VPS53YJL029C STB6P36085 766 aa3.59□□□□□ -1.84
VPS53YJL029C IML3P38265 245 aa3.59□□□□□ -1.84
VPS53YJL029C LRP1P38801 184 aaKnown RBP3.59□□□□□ -1.84
VPS53YJL029C COG1P53079 417 aa3.59□□□□□ -1.84
VPS53YJL029C DIG1Q03063 452 aaKnown RBP3.59□□□□□ -1.84
VPS53YJL029C HEL2Q05580 639 aaKnown RBP3.59□□□□□ -1.84
VPS53YJL029C NAG1Q8TGN9 163 aa3.59□□□□□ -1.84
VPS53YJL029C Q0182Q9ZZW1 134 aa3.59□□□□□ -1.84
VPS53YJL029C CLN1P20437 546 aa3.58□□□□□ -1.84
VPS53YJL029C SCL1P21243 252 aaKnown RBP3.58□□□□□ -1.84
VPS53YJL029C NDI1P32340 513 aa3.58□□□□□ -1.84
VPS53YJL029C HXT3P32466 567 aaKnown RBP3.58□□□□□ -1.84
VPS53YJL029C MAK5P38112 773 aaPredicted RBP3.58□□□□□ -1.84
VPS53YJL029C PCH2P38126 564 aa3.58□□□□□ -1.84
VPS53YJL029C POP4P38336 279 aa3.58□□□□□ -1.84
VPS53YJL029C DBP8P38719 431 aa3.58□□□□□ -1.84
VPS53YJL029C TIF34P40217 347 aaKnown RBP3.58□□□□□ -1.84
VPS53YJL029C PET130P47065 347 aa3.58□□□□□ -1.84
VPS53YJL029C ASN2P49090 572 aaKnown RBP3.58□□□□□ -1.84
VPS53YJL029C APT1P49435 187 aaKnown RBP3.58□□□□□ -1.84
VPS53YJL029C GND2P53319 492 aa3.58□□□□□ -1.84
VPS53YJL029C CWC22P53333 577 aaKnown RBP3.58□□□□□ -1.84
VPS53YJL029C MAL13P53338 473 aa3.58□□□□□ -1.84
VPS53YJL029C CPR6P53691 371 aaKnown RBP3.58□□□□□ -1.84
VPS53YJL029C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
VPS53YJL029C YDR109CQ04585 715 aa3.58□□□□□ -1.84
VPS53YJL029C HDA3Q06623 655 aa3.58□□□□□ -1.84
VPS53YJL029C BUD7Q08754 746 aa3.58□□□□□ -1.84
VPS53YJL029C VPS68Q12016 184 aa3.58□□□□□ -1.84
VPS53YJL029C AIM41Q12032 185 aa3.58□□□□□ -1.84
VPS53YJL029C RTK1Q12100 620 aaPredicted RBP3.58□□□□□ -1.84
VPS53YJL029C FUR4P05316 633 aaKnown RBP3.58□□□□□ -1.84
VPS53YJL029C ERR1P0CX10 437 aa3.58□□□□□ -1.84
VPS53YJL029C ERR2P0CX11 437 aa3.58□□□□□ -1.84
VPS53YJL029C HSF1P10961 833 aa3.58□□□□□ -1.84
VPS53YJL029C GCG1P32656 232 aaKnown RBP3.58□□□□□ -1.84
VPS53YJL029C AIM26P32858 118 aa3.58□□□□□ -1.84
VPS53YJL029C IMP3P32899 183 aaPredicted RBP3.58□□□□□ -1.84
VPS53YJL029C SCD5P34758 872 aa3.58□□□□□ -1.84
VPS53YJL029C TFA2P36145 328 aa3.58□□□□□ -1.84
VPS53YJL029C MRPL37P36532 105 aa3.58□□□□□ -1.84
VPS53YJL029C UME6P39001 836 aa3.58□□□□□ -1.84
VPS53YJL029C ERV46P39727 415 aa3.58□□□□□ -1.84
VPS53YJL029C SCC4P40090 624 aa3.58□□□□□ -1.84
VPS53YJL029C RGI2P40188 164 aa3.58□□□□□ -1.84
VPS53YJL029C MEP1P40260 492 aa3.58□□□□□ -1.84
VPS53YJL029C IME4P41833 600 aa3.58□□□□□ -1.84
VPS53YJL029C ERR3P42222 437 aa3.58□□□□□ -1.84
VPS53YJL029C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
VPS53YJL029C PEX8P53248 589 aa3.58□□□□□ -1.84
VPS53YJL029C YMR114CQ04471 368 aaKnown RBP3.58□□□□□ -1.84
VPS53YJL029C THI73Q07904 523 aa3.58□□□□□ -1.84
VPS53YJL029C YOR012WQ12351 137 aa3.58□□□□□ -1.84
VPS53YJL029C SPT15P13393 240 aaKnown RBP3.57□□□□□ -1.84
VPS53YJL029C GAL11P19659 1081 aa3.57□□□□□ -1.84
VPS53YJL029C DCC1P25559 380 aa3.57□□□□□ -1.84
VPS53YJL029C MSH1P25846 959 aa3.57□□□□□ -1.84
VPS53YJL029C PHO11P35842 467 aa3.57□□□□□ -1.84
VPS53YJL029C YBR197CP38306 217 aa3.57□□□□□ -1.84
VPS53YJL029C PHO12P38693 467 aa3.57□□□□□ -1.84
VPS53YJL029C ELO1P39540 310 aa3.57□□□□□ -1.84
VPS53YJL029C SEC9P40357 651 aa3.57□□□□□ -1.84
VPS53YJL029C PAN6P40459 309 aa3.57□□□□□ -1.84
VPS53YJL029C BIR1P47134 954 aa3.57□□□□□ -1.84
VPS53YJL029C TRF5P48561 642 aaKnown RBP3.57□□□□□ -1.84
VPS53YJL029C MNN10P50108 393 aaKnown RBP3.57□□□□□ -1.84
VPS53YJL029C YNL058CP53947 316 aa3.57□□□□□ -1.84
VPS53YJL029C SLT2Q00772 484 aa3.57□□□□□ -1.84
VPS53YJL029C NUP100Q02629 959 aa3.57□□□□□ -1.84
VPS53YJL029C ISR1Q06098 443 aaKnown RBP3.57□□□□□ -1.84
VPS53YJL029C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
Retrieved 100 of 5,963 RNA–protein pairs in 109.8 ms